Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ------>NtERF2                           <---------ALFIN1                           --------->DEAR3(1)                          ----------->HVH21                         ------>NtERF2                        --------->RAP2.6(2)                        --------->ANAC46     --------->YAB1     --------->ANAC58     <---------ICU4     --------->ANAC58     -------->ATHB1     ------->GAMYB    <---------ATHB12   --------->MYB46(3)    <---------AHL20(2)  --------->WOX13(1)   <---------MYB55(2)    --------->AHL20(2)      <----------DOF2 ------>ANAC58      <---------ALFIN1         --------->AHL20(1)<-----------GT1                      - ------>ANAC58  <-----------HVH21   --------->WOX13(1)      ------>MYB46(1)             <---------AHL20(2) ------>ANAC46 <----------DOF2   <-----------HVH21          ------>MYB83                --------->AHL20(2)   aagccaatcattcattcctttcacacccgccacggtgtcaatccaaattttttagaatcaccaaattacacctttacccttatattgtttttaatttgtt  12837000                                       --------->ARR14(2)                                       <---------ARR14(2)                                   <-----------------AGL2                                   ----------------->AGL2                                   <-----------------AGL3                                 ------>MYB83                                 -------->P                                 ------>MYB46(1)                                --------->MYB55(1)                               <---------MYB111(2)                               <---------MYB46(2)                               <---------MYB111(1)                               --------->MYB46(3)                               <---------MYB59                               --------->AtMYB61                         --------------->AtSPL8           ------>MYB83  --------------->AtSPL3                                                 -----           ------>MYB46(1)    --------->DEAR3(2)                                            ---------         --------->MYB46(3)  ------->TEIL         --------->CCA1(2)                --------->MYB52(1)      <-----------GT1    <---------------AtSPL8<------MYB83                        <-----------GT1<--  <-----------ARR10      <---------------AtSPL3<------MYB46(1)       ------>ZmHOX2a(1)------->GAMYB-- -------->LBD16       --------->AHL20(2)     <--------P       <-------TEIL<-----------GT1 <---------YAB1   tccgaattttaccaactgtttcaataaaacgtaccaacccatttctggttggatacaagcgggattcattcctatataacatttttaacggtatcattca  12837100             <---------AHL20(2)             --------->AHL20(2)  --------->MYB52(1)   --------->YAB1                                 <----------DOF2 ---->WOX13(1)        <---------ATHB12                               <---------DAG2 >WOX13(1)   --------->AHL20(1)                           <----------DOF2 -------ATHB12<---------AHL20(2)                       --------->ARR11(3)           --------->HSFC1(2) ------->YAB1<---------AHL20(1)      <-----------GT1   <---------ARR11(3) <-----------GT1 ---------->DOF2   atcataccggtccaatttatttctatcatgctatctatataacattttcttacaaaatgtctttctctataccttttcacattcgaaacttcaaaagtta  12837200                                                             --------->YAB1                       ----------->GT1               <---------AHL20(1)                             -                  <---------CCA1(2)                  --------->AHL20(2)            --------->AHL20(1)                --------->ANAC46                     <---------AHL20(2)            --------->ARR11(3)              <---------ANAC46                       --------->AHL20(1)            <---------AHL20(1)              <---------ANAC55(2)                   <---------AHL20(2)          --------->AHL20(2)  -              --------->ANAC58                      --------->AHL20(2)      <---------YAB1  <--------              --------->ANAC58                  <---------YAB1        <---------TOE2(3)     ---------        --------->AHL20(2)                     <---------AHL20(2)     <---------TOE1(3)     <--------        <---------AHL20(2)                     --------->AHL20(2)     ---------->ID1        <--------       --------->AHL20(2)           --------->AHL20(2)   <---------AHL20(2) ----------->TBP ---------       <---------AHL20(2)        ------->TEIL --------->YAB1 --------->TOE2(3)  <---------AHL20(2)  <       <---------AHL20(1)      <-------TEIL   --------->AHL20(2)     <-----------GT1        ---------   atgtgtcaatttaattacgcataactcgaaaaatgcattttaaaacaattaaaattaaatttatcttaatttgacgttataaaaaaatattgaatatatt  12837300         <---------YAB1         --------->ICU4       --------->YAB1 -------->LBD16 -------->HSFB2a(2) -AHL20(2) >AHL20(2)                       <---------ANAC55(2) -ARR11(3)                       --------->ANAC55(2)           *TSS -AHL20(1)        ---------->DOF2--------->ANAC46             ======================================= >AHL20(1)--------->YAB1        <-------TEIL                  --------->TGA1a ---------HSFB2a(2)   <------ZmHOX2a(1)          <---------ANAC46      ------>ZmHOX2a(1) >ARR11(3)<---------ICU4   ----------->TBP<---------ANAC46    <---------TGA1a       <-----------GT1<-   tccgagaaataataataagagaaaggactataaatacgtctctagtgtgtaatgtgtaacacagacgagagtcctcaaatccattttctctctctatctc  12837400                              <---------ALFIN1                            ------>NtERF2                           <---------bZIP60(1)                           --------->bZIP60(1)                           <---------ALFIN1                           --------->REM1(1)                          <------NtERF2                         ----------->RAV1(1)                         <---------ATERF1(1)                         ------>NtERF2                                                            <--                        ----------->HVH21                                                        <---                        --------->DEAR3(1)                                                --------->SPL1(2)                       <------NtERF2                                                     --------->SPL1(1)                      <---------ATERF1(1)                                               <---------ZAT14                     <---------DEAR3(1)      >>>>>>>>>AtLHY                             <---------SPL7           ---------->ID1=======================RAV            --------->DAG2           --------->ZAT14 =========bZIP_DOF  ------>ZmHOX2a(1)        >>>>>>>>>AtCCA1  --------->DAG2          <-------------- ---------DOF2      <---------LBD16 <-----------RAV1(2)      ---------->DOF2          <--------------   tctttatcccttcgtcttcttcctcggcgacaccacttgcaggcgctaactcgacgaagaaggaaaaggtgagagaaactctctgaaaactgtacggatt  12837500                          ------->TEIL                                      <---------DAG2    ------->TEIL          --------->GLK1(2)           <-----------GT1       <----------DOF2 ---------GT1             <---------ARR14(2)        <-----------GT1      <-----------GT1         <--- ------AHL20(2)           --------->ARR14(2) --------->HSFB2a(2)  <---------MYB52(1)            <---- -AtSPL8               --------->ANAC46      <---------HSFB2a(2) <-------GAMYB   <------------------- -AtSPL3        ------->TEIL                <---------LBD16     <-----------RAV1(1)             <----   taaacgtatatatgtgtgtatgtatacgaatctgatggtttagttttctggatttttctccattctctgttgattctactttttttgtttgtttgtttgc  12837600                            --------->ANAC46                         <---------ZAT14                                    ------->TEIL                         --------->ZAT14                                 --------->ANAC46                         <---------ZAT18                            <-----------GT1              <---                    <---------ZAT18                             <---------DAG2                   <---                    --------->ZAT14                             <----------DOF2               <------                    <---------ZAT14                            <---------ANAC58             <-------- -------DOF2    --------->ANAC46         <----------DOF2       <---------ANAC58             <-------- -----ANAC58    --------->ANAC58   <----------DOF2<---------HSFB2a(2)    --------->AtLEC2<---------GLK1(1) -----ANAC81    --------->ANAC58 <---------At4g35610        <---------WOX13(1)           --------->GLK1(1) -----ANAC58  <-----------GT1    --------->ZAT2   --------->HSFB2a(2)  <---------AtLEC2 <---------ARR11(3)   tttgtttctctgtgtttcacgctgcactacgctccagctttctctttgtttttcagaaccagattgcttttttccatgaaactcgatcgagatttcttac  12837700                                                  <----------DOF2                                            <---------GLK1(2)                                        ----------->RAV1(2)                                        <------NtERF2    --------------->AGL15             <---------ETT(2)    <---------------AGL15             --------->ETT(2)    ------>ZmHOX2a(1)              =================RAV                                  ------------   <-----------------AGL3        ----------->RAV1(2)                                     <-----------   ================================================================================================== ---------->ID1         --------->CCA1(2)   --------->ARR14(2)                          <------------ <-----------GT1        <-----------GT1------>NtERF2                                    <------------ ------DAG2           --------->YAB1<-----------HVH21       <---------TOE1(2)      <---------ARR11(3) -------DOF2         <---------YAB1<-----------RAV1(1)      <---------TOE2(2)<-----------GT1 -----GT1        <----------DOF2 <---------At4g35610  <---------At4g35610 --------->ARR11(3) -ANAC58         <---------DAG2  --------->At4g35610--------->REM1(1)     <---------GLK1(2) -ANAC58     ---------->ID1   <-------TEIL  <---------ARR14(2)            <---------ARR11(3)    <----   tttttcctatttttagtcgctttatgatacgattcatctgtcgcctgattcgcttcatctccttggtttgattttagattttcaatttcttctgtttttg  12837800 <---------ANAC58 <---------ANAC55(2) <---------ANAC46 <---------ANAC55(1) --------->ANAC55(2) <---------ANAC58 <---------YAB1 --->AGL15                                 ---------->DOF2 ----AGL15  --------->At4g35610       ----------->GT1            <------NtERF2             <---------GLK1(2) =====MADS_MADS               --------->LBD16                    <---------MYB52(1)      <---------TOE1(3) -----AGL2  <---------At4g35610--------->LBD16                  ------>NtERF2     <---------TOE2(3) -----AGL3--------->ZAT18    ----------->RAV1(2)               --------->DEAR3(1) <---------TOE1(3) -----MYB46(3)               <---------LBD16            ------->TEIL          <----------DOF2   gttacgtttgtgttcgctgtgatgaagttttccctgaaacttgttaaaagcgataatgcatttcgccgtcgttttcttcgattttaggtttaagcttctc  12837900  Previous    Next  AGI:  At4g24972.1    Description:  TPD1 (TAPETUM DETERMINANT 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G32583.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68335.1) Range:  from: 12837363    to: 12839833    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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