Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ANAC58                                            <---------TGA1a                                            <---------ANAC58                                            <---------O2                                            <---------ANAC46                                            <---------bZIP60(2)                                         ----------->HVH21                                       --------->bZIP60(1)                                       <---------ANAC55(2)                                       --------->ANAC55(2)                                       <---------ANAC55(1)                                       <---------O2                                       --------->O2                                       <---------TGA1a                                       --------->TGA1a                                       <---------ANAC58                                  <---------At4g35610                                  --------->At4g35610                                  --------->HSFC1(2)                        <----------DOF2<---------ANAC58                        <---------DAG2 <---------ANAC46                           --------->YAB1                        =========================bZIP_DOF                   --------->TOE1(3) ---------->DOF2        =========================bZIP_DOF                   --------->TOE2(3) ------ID1    --------->MYB59     <---------HSFC1(2)                    <-----------GT1 ->DOF2  <---------AHL20(2)    --------->LBD16                   <---------MYB52(1)        --------->YAB1   aacaaaagaatgtaattgggtcataactttttccgaagcttacgtgacttgggagaaaatcaaacccattagtttcacccttaatcaaactaatcacaaa  12827500                              --------->YAB1      <----------ID1                           <---------ICU4     --------->AHL20(2)                           --------->YAB1     <---------AHL20(2)                       ---------->DOF2                        --------->YAB1        <---------AHL20(1)                       ==============                      --------->AHL20(2)      --------->AHL20(1) <----------DOF2 ----------->GT1                ----------->GT1 --------->At4g35610         --------->ARR11(3) ======================          ---------->DOF2 --------->ICU4   --------->YAB1   <---------ARR11(3) ---------->DOF2     <----------DOF2 --------->YAB1 ---------->DOF2    ---------->DOF2      --------->YAB1   ttttgaactttgcaaagaaggtaaaataataatcagcaaaaagattaataaaatgacaaaagtatctctttaaaagattaataaagaaataaagaaatga  12827600                                                                                      --------->ALFIN1                 <---------TGA1a                                                    --------->ALFIN1                 ====================bZIP_DOF                                      ------->MYC4                 --------->TGA1a                                                   <-------MYC4                 <---------O2                                                      ------->PIF5                 --------->O2                             ------>NtERF2            ------->MYC2              ----------->HVH21                          --------->DEAR3(1)        <-------PIF5              ------->GAMYB                            <---------ATERF1(1)         <-------MYC2              --------->DEAR3(1)                      <---------ETT(2)             ------->MYC3              --------->DREB2C(2)                     --------->ETT(2)             <-------MYC3              =============MYC_MYB                   --------->DDF1               <--------ABF1             --------->DEAR3(2)                     <-----------HVH21             --------->O2             --------->MYB46(3)             <---------ATERF1(1)                   <---------TGA1a             --------->SPL7                 <---------ORA47(2)                    <---------ANAC55(2)            ------>MYB83                    <---------DEAR3(2)                    <---------ANAC46            ------>MYB46(1)                 ----------------------->TaNAC69(2)    --------->TGA1a           --------->ORA47(1)               <------MYB46(1)                       <---------O2           --------->MYB55(1)               <------MYB83 --------->ANAC46         ===================          ----------->HVH21                --------->MYB46(2)                     ===================          <---------MYB55(2)               --------->MYB111(2)                   ------>NtERF2          --------->MYB46(3)               <---------DEAR3(1)                   <---------ALFIN1          --------->DEAR3(1)               --------->MYB111(1)                  <------------OsbHLH66          <---------MYB46(2)               <---------MYB46(3)                --------->ANAC58          --------->DEAR4(1)     <---------YAB1------>NtERF2                 --------->ANAC46         --------->DEAR3(2)   <---------AHL20(2)<------NtERF2            <-----------ARR10          -      ----------->HVH21   <----------DOF2  <---------DEAR4(1)            --------->GLK1(2)          <  --------->At4g35610   ---------->ID1     <---------DREB2C(2)          <---------GLK1(2)         --- ==========================bZIP_DOF       <---------ORA47(1)          ----------->ARR10          ---- ==========================bZIP_DOF    <---------TOE2(3)--------->ATERF1(1)  --------->ANAC58  <-----   cataagctctcaccgaccgacgtcttgtcttttttattcttaaggtcggtgccatgtcgacgccttcaagcttagaatctcgccacgtgtgggataaact  12827700    --------->ANAC58                                                                 --------->AHL20(2)    --------->ANAC58                                                           --------->TOE2(3)   ------->TEIL                                                               ----------->GT1       -  ------>MYB83                                                        --------->HSFB2a(2)        ----  ------>MYB46(1)                                                     <---------HSFB2a(2)--------->AHL20(2) ======MYC_MYB                                                        >>>>>>>ZML2    <---------AHL20(2) =======MYC_MYB                                              --------->At4g35610--------->DOF5.7(2) - ------>GAMYB                                                <---------At4g35610<---------MYB52(1)  < ---------MYB59                                           <------NtERF2    <---------TOE1(1)   ------ ----->P <---------ATHB12                              --------->RAP2.6(3) <---------TOE2(1)  ------- ----->MYB52(1)                     ----------->HVH21  --------->DDF1 <---------------AtSPL8 -------- ----MYB52(2)            ---------->DOF2 --------->ZAT18--------->ETT(1)  --------->SPL7 <---------AHL20(2)   aaccgaacccaatcgaaccagacagaccaaagacagaccagaccggactagttgtatgtcggcatcagcgttctagtacgacgttaattaaaaaaataaa  12827800                                                           ------>MYB46(1)               <---------ARR11(3)                          ------>MYB83               --------->ARR11(3)                        ------->GAMYB       --------->AHL20(2)                               <---------MYB55(2)      <---------YAB1                                    <---------MYB52(2)      <---------AHL20(2)                                --------->MYB46(3)   <---------AHL20(2)                                  --------->ANAC58   --------->AHL20(1)                                  -------->P   <---------AHL20(1)                                  ------>MYB83   --------->AHL20(2)                                --------->AtMYB61 -------->AHL20(2)                                  --------->DEAR3(2) ----->YAB1   --------->YAB1             --------->DAG2------>MYB46(1) -------->AHL20(1)                       <XXXXXXXXXXXXXXXXXXXXMIR416         --------->SPL7 ---------AHL20(2)                      ---------->DOF2--------->ANAC58    <---------SPL7 --->AHL20(2)<---------YAB1           --------->YAB1--------->MYB46(3)   --------------->AtSPL8 -->YAB1 <---------YAB1              <---------ATHB12<---------MYB111(1) --------------->AtSPL3   <-- ->AHL20(2)--------->YAB1   --------->YAB1  --------->ALFIN1           --------->MYB52(1)        ----   aataaaatattatttatgatattccaccaataagagccaatgaaaagtgtgtgaaccaaccaacttctgtagcaaaccgtaccatttctctcttagatac  12827900                       <-------TEIL                    <------MYB83           --------->HSFB2a(2)           <---------HSFB2a(2)     ------>MYB83  <---------TOE2(3)              <<<<<<<<<TBF1     ------>MYB46(1)<------MYB46(1)            *TSS   <---------MYB59 --------->MYB59      <----------DOF2      <---------AHL20(2) --------DOF2----------->TBP <----------DOF2---------->ID1  --------->AHL20(2) ----->TOE2(3)--------->AHL20(2)        --------------------->WRI1--------->ATHB12            -------   ctttaccttccttctataaattaggttcttcctttcacatttctttgtcttcttcttctacataaaattgattcgcctcgaaatttacacagacttgtcg  12828000                                                         ----------->GT1                                                   ---------->DOF2                                            <---------ARR11(3)                               --------                                            --------->GLK1(2)                                <-------    <----------DOF2                         --------->ARR11(3)                          ------>ZmHOX2a(1) --->ID1                         <---------ICU4 --------->AtLEC2                   <----------DOF2   ctctctctttctctcttatttcacagagcccctaaacatttccaaaaatcttgcaaaggaagaaaaacaatggacaaattttggactttcctcactgctc  12828100                    <---------YAB1                  <---------ICU4                                         <---------GLK1(1)                  -------->HAHB4                                       <------------------------ANAC81                  <---------AHL20(2)                              <---------DAG2                 <---------YAB1                      <---------------AGL15                 --------->ICU4                      --------------->AGL15                 <---------ATHB51                   ----------------->AGL1            ----------->GT1                         ----------------->AGL2           <---------MYB46(3)                       ----------------->AG --------->GLK1(1)          <---------ANAC46         <-----------GT1  <-----------------AGL2       <---------DEAR3(1)   --------->YAB1          <-----------------AGL3   <-----------RAV1(2)      --------->TOE1(3)       ----------------->AGL3 ->ZAT14 <------NtERF2--------->TOE2(3)     <---------MYB52(1)    <----------DOF2 --ZAT14 --------->ATERF1(1)--------->TOE2(3)  <---------YAB1  <-----------GT1------>ZmHOX2a(1)   ttcattcaggcgctgggtaattattcttaatcttaattttccttccattatgtttccaaaattagttactttttgatttcctctgtttcgatttctaatc  12828200                                                  <---------DAG2                                                  <----------DOF2                                               <-----------GT1                                            --------->bZIP60(1)                         ------->TEIL  --------->YAB1 >>>>>>>>>>>>>>>>>LFY                         <---------ARR14(2) ----------->GT1                 <------MYB83          <---------ANAC58                                           ---                 <------MYB46(1)       <---------ANAC58                        <-----------GT1   ----             <---------MYB46(3)      <---------ARR14(2)  --------------------->WRI1 <----------DOF2  --------->TOE2(3)      --------->ARR14(2) <---------bZIP60(1)           ----------->GT1  ----------   caaaccgtaatcgatttgttggtaatgtatatgcaggcctatcgtgatgttactttatccattgtaagtttctctcttgttaaaccctttaacaaaagaa  12828300                                                                                           --------->ANAC58                                                                                           --------->ANAC55(2)                                                                         <---------YAB1    --------->ANAC58                                                                <-----------GT1            <---------ANAC55(2)                                                      ----------->GT1  --------->YAB1     <-------TEIL     <----------DOF2                               <---------ARR11(3)  <---------ICU4   --------->ARR14(2) ------>DAG2              <----------DOF2          --------->GLK1(2)<---------ICU4    <-------------- ------>DOF2              <---------DAG2           --------->ARR11(3) --------->ICU4  <-------------- >DOF2            ------>ZmHOX2a(2)     --------->AHL20(2)   <---------ICU4    <---------YAB1 -------   aaagtttctttctggttcgatctctctactttttgttgaagattaaaaacaaaaatctgtgaatatttactaattatgtttttgattacaggtacgcatc  12828400  Previous    Next  AGI:  At4g24960.1    Description:  ATHVA22D (Arabidopsis thaliana HVA22 homologue D). Identical to HVA22-like protein d (HVA22D) [Arabidopsis Thaliana] (GB:Q9S760;GB:Q9SW30); similar to ATHVA22E (Arabidopsis thaliana HVA22 homologue E) [Arabidopsis thaliana] (TAIR:AT5G50720.1); similar to hypothetical protein OsI_034972 [Oryza sativa (indica cultivar-group)] (GB:EAY81013.1); contains InterPro domain TB2/DP1 and HVA22 related protein (InterPro:IPR004345) Range:  from: 12827947    to: 12829253    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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