Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------AHL20(2)    <-----                                                                         --------->AHL20(2)    ------                     <---------YAB1                                      <---------AHL20(1)    ------                   --------->YAB1                                       --------->AHL20(2)--------->At4g35610 -------->ZAT14    <---------ICU4                                  --------->ANAC55(2)    <---------At4g35610 ------ANAC46     --------->ICU4             ----------->GT1    <---------AHL20(2)       --------->MYB52(1) ---->ATHB12  <---------YAB1     --------->TOE1(2)          <---------AHL20(2)       --------->WOX13(1)   agtggagactaggtttatgaattatgaccgtagaacatatgaaaactgtgtaaaactattgtataatttatgtattaaattttgtattaatcaactgata  12823400                   --------->LBD16                 --------->MYB46(3)                 --------->DEAR3(2)                 <------------AtMYB77                --------->MYB52(1)                ------>MYB83                ------>MYB46(1)           <-----------ARR10           <---------ARR14(2)           --------->ARR14(2)          <---------ARR14(1)                      <----------DOF2          --------->AHL20(2)  <-----    <---------DEAR3(2)                          ---------->ID1             <---------AHL20(2)  <-----    ----------->HVH21   <------ZmHOX2a(2)      <-----------GT1         --------->AHL20(1)     <------    <---------SPL7--------->DEAR3(1)         <---------AHL20(2)        --------->AHL20(2)     <------ <-----------HVH21------->GAMYB            <---------AHL20(2)          <---------AHL20(2)  <---------MYB52(1) ----GLK1(1)    -------->P             <---------AHL20(2)       --------->HSFB2a(2)       <-------GAMYB --->GLK1(1) ------>ZmHOX2a(2)         --------->AHL20(2)       <---------HSFB2a(2)   --------->TOE2(2) --->CCA1(2)<------ZmHOX2a(2)          --------->YAB1        <-----------GT1<---------AHL20(2)<------   tgcggtcggaccggatccaaccggcgatcgaaacataccatttatattttttctttttctattttactagaaataaaataaatagaaacctccgttgctt  12823500                      >>>>>>>>>>WRKY43                      >>>>>>>>>>WRKY38                      >>>>>>>>>>WRKY6                                                               -                      >>>>>>>>>>WRKY26                                                              -      *TSS            <---------WRKY18(1)                                                           - ----DAG2             >>>>>>>>>>WRKY11                                                              - -----DOF2           --------->WRKY45                                   <---------YAB1              - ---ANAC58           --------->WRKY12                        --------->HSFB2a(1)                 <--- ---ANAC58           --------->WRKY38(1)     <------ZmHOX2a(1)--------->At4g35610     ----------->GT1 ---ANAC46 <-----------HVH21           --------->ALFIN1    ---------->DOF2    >>>>>>>>>GATA-1 -------   ttttggcaaacactgtgagagagttgaccaaaatcgacccagtgggaggactaggtttatcgaaagctccagttttcatagataaatccagtaaaattat  12823600                                                                                    <------ZmHOX2a(1)      --------->GLK1(2)                                                            --------->At4g35610 -------->ANAC55(1)                                                              <-----------RAV1(2) -------->ANAC58                                                                <---------ZAT2 -------->ANAC58                                                                --------->ZAT2   ---- -------->AtLEC2                                                       --------->At4g35610  <-------- -------->ANAC46            <----------DOF2 <---------ANAC46          <---------ARR11(3)    <-------- ------REM1(2)         ---------->DOF2      <---------ANAC58          --------->ARR11(3)    <-------- -->AHL20(2)   <---------ANAC46             <---------ANAC58          <-----------ARR10     <--------   acacgcaaattctagtttcttagagcaaagctttgttgaattgatagcttgaatttgggaatggacggagaagagcttaccgagcaggagactgccttgt  12823700    <-----------------AG  --------->DREB2C(2)  --------->ANAC58  --------->ANAC58   <---------ZAT18  ------->GAMYB      --------->ZAT18                                     ------------>CBF --------->MYB46(3)<---------RAP2.3(3)                                  --------->ANAC58 ----->SPL7    --------->ALFIN1                                         --------->ANAC58 -ANAC46    <---------TOE2(3)                                           --------->ANAC46            < -ANAC58    <---------TOE1(3)                       *TSS              --------->ZAT6     <---------DAG2 -ANAC58<---------GLK1(2)                    <----------DOF2   <----------DOF2           <----------DOF2 ----------SPL14 --------->ALFIN1      ----------->GT1      ---------->ID1            <-----------GT1   acgaccgccagattagggtttggggcgctaatgctcagagaaggttactttctcatccccttgttcttttcaacactcaatcttgttttcacttttctaa  12823800                               <---------YAB1                             <---------ICU4                             --------->YAB1                            --------->ICU4                            <---------ATHB12                <-------TEIL<---------ATHB51 <----------DOF2             --------->At4g35610           <------NtERF2             <---------At4g35610--------->ATHB12       --------->ZAT14           <------ZmHOX2a(1)       <----------DOF2  ------------>CBF <---------DEAR3(1)              <---------------AGL15 ---------AHL20(2)    --------->At4g35610<---------RAP2.6(2)            ----------------->AGL1  -----   atttaagtgcttttaagctgcatcatctcaattatgatttgagtcggctttgagtactaaactcttactatttggccattttaggagaatgcttaatggt  12823900                         <---------AHL20(2)                       <---------YAB1                    <------ZmHOX2a(2)                   --------->ARR11(3)                   <---------ARR11(3)             --------->ARR14(2)                    ------>ZmHOX2a(1)             <---------ARR14(2)     <---------AHL20(2)                               <---------------         <---------LBD16 --------->AHL20(2) <---------ANAC58              <---------ANAC58      ---------->DOF2 --------->TOE2(3)     <---------ANAC58              <---------ANAC58<---------AHL20(2) ---->PCF5 --------->LBD16<---------YAB1  <-----------GT1       <----------DOF2    <---------AtMYB61   cccttcttaaatgcggatttagatcattaaaattgtatttttttttgcttctcctccattcgattactttctcttggcttcagttttggtttttatttgt  12824000                                             <---------ANAC58                     -------->HAHB4                                  --------->ATHB12                                --------->YAB1                                  --------->ATHB51                                <---------ICU4                                  -------->ATHB1                               <---------ICU4                                 <---------YAB1                               ------>ZmHOX2a(1)                               <---------------AGL15                   --------->ZAT14 --------->At4g35610                              <-----------------AGL3          <---------HSFB2a(2)<---------ATHB51  <-                              <-----------------AGL2     <---------At4g35610 <---------MYB59 <-------                             <---------ANAC55(2)    <---------GLK1(2)  --------->ZAT18 --------->ZAT2  <----------DOF2            --------->ANAC55(2)    <---------ARR14(2) <---------ZAT18 <---------At4g35610 ---------ANAC81           <-----------GT1   <---------ANAC58 --------->HSFB2a(2)--------->ICU4<-----   ttgtctttgtcttaagagaattttagttaatacctattattggtttagcgtttggattctgcttctagactagtgcattcctaattatgagctcccttag  12824100                                                                                             --------                                                                                            ---------                                                                  --------->At4g35610       <--------                                                             <---------DAG2                 <--------       --------->At4g35610              <---------TOE2(3)    <----------DOF2   --------->AHL20(1)       <---------At4g35610           <---------WOX13(1)     <---------ANAC58   <---------AHL20(1) --------MYB46(3)                 <---------TOE2(3)         <---------ANAC58   <---------AHL20(2) --MYB52(1)                       <---------YAB1          <-----------GT1      --------->AHL20(2) ----TOE2(3)              <-----------GT1          --------->YAB1 <---------At4g35610     --------->ANAC46   gttgttctgagatgagagttttgttttttaactattaagattgatgtattcattcatattttgctttttgctgaagcttattttattgatacactacact  12824200                                                                                <---------ARR14(2)                                               <------MYB83--------->AtLEC2     <---------ARR11(1)                                               <------MYB46(1)                  --------->ARR11(3)                                              <---------MYB46(3)                --------->ARR14(2)                                              --------->MYB111(1)      ---------->DOF2                                              <---------DEAR3(1)      --------->AtMYB61    --------->HSFB2a(2)      --------->ICU4                          --------->MYB111(2)  <---------WRKY18(1)     <---------HSFB2a(2)   --------->AHL20(2)                         --------->MYB46(2) <---------WOX13(1)       <---------LBD16 ->ZAT6                  --------->ANAC58     <---------AtMYB61 <---------ARR14(2)      <---------ARR14(2) >ZAT14          <---------ZAT2              <--------P  <---------ANAC58       <---------ARR11(3) -ZAT14   --------------------->WRI1  <---------ZAT6     <---------ANAC58      <---------CCA1(2)  --- -ZAT18<-----------GT1   --------->ANAC58    <---------MYB55(1) --------->ARR14(2)      --------->ARR14(2)   accatgtaattactctgtaagcttggcacgatttgatatagtgtgaggttggtgttttgccttgcagattgaccaaagctcatatcttggtatctggaat  12824300  Previous    Next  AGI:  At4g24930.1    Description:  thylakoid lumenal 17.9 kDa protein, chloroplast. Identical to Thylakoid lumenal 17.9 kDa protein, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SW33); similar to unnamed protein product [Vitis vinifera] (GB:CAO68315.1) Range:  from: 12821233    to: 12823752    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24940.1    Description:  SAE1A (SUMO-ACTIVATING ENZYME 1A); SUMO activating enzyme. similar to SAE1B (SUMO-ACTIVATING ENZYME 1B), SUMO activating enzyme [Arabidopsis thaliana] (TAIR:AT5G50580.2); similar to SUMO activating enzyme 1b (SAE1b) [Arabidopsis thaliana] (TAIR:AT5G50680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68306.1); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Molybdenum cofactor biosynthesis (InterPro:IPR009036) Range:  from: 12823506    to: 12826210    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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