Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ----------->HVH21                                                                          --------->DEAR3(1)<--------                                                                          --------->At1g77200                                                                          --------->DREB2C(2)      --               --------->ICU4                                            --------->DEAR3(2)<---------ANAC46         <---------YAB1      <---------ANAC46  <------MYB83           <---------ABI4(2)   <---------MYB46(3)    --------->DAG2      <---------AtLEC2       <------MYB46(1) --------------------->WRI1 --------->ATHB12   ---------->DOF2<---------YAB1   ---------->DOF2            <---------ANAC55(2)        <---------YAB1   attgaaaaagtatgaaaatgatcaatgcatggctggaaaaagaagagattggtgaagagaaatcacctaagtagcaccgacgatgatgttgttgattgga  12820300                            <---------ARR14(2)                            ------->TEIL                         --------->ANAC58                         --------->ANAC46                              <---------ANAC46                         --------->ANAC58               --------->SPL1(2)                        <---------TOE1(2)               --------->SPL7 <---------ANAC58            --                        --------->LBD16                <---------SPL1(1)                        -----                      --------->TOE1(2)               <---------SPL7   <---------ANAC58         -----       --------->At4g35610  --------->ARR14(2)       <----------DOF2<----------DOF2       ------->GAMYB --------->ICU4    --------->GLK1(2)                <---------------AtSPL3             ----------->RAV1(1) -WOX13(1)        <---------GLK1(2)        ------->TEIL--------->SPL1(1)               --------->MYB52(1) -------->DOF2---------->DOF2      <---------ICU4  <------------------SPL14         --------->ANAC46   ataaagatgagcttcacaaagaatcccacgaatcccattactacgaacccgattgctgtacggactgcaactttcgtgaattctacaaacaacagaaaca  12820400                     ==================HOX2a_HOX2a                     ------>ZmHOX2a(1)                     ===================HOX2a_HOX2a               ------>ZmHOX2a(2)              --------->GLK1(1)              <------ZmHOX2a(2)              ==============HOX2a_HOX2a             <---------AGP1             <---------ARR11(3)             ------->TEIL             <-----------ARR10             --------->ARR14(2)  ------>ZmHOX2a(2)                                             ------             <---------ARR14(2) <------ZmHOX2a(2)                                            ========             --------->ARR11(3)<---------ARR14(3)                                            ------>ZmHOX2a(2)          --------->ANAC58     --------->ARR14(3)                --------->ZAT2             =========          --------->ANAC55(1)  <-----------ARR10                 <---------At4g35610        <------ZmHOX2a(2)          --------->ANAC46     --------->AGP1                    <---------ZAT2            <---------ARR11(3)          --------->ANAC55(2)  <---------GLK1(2)                 --------->At4g35610       <---------ARR14(2)          --------->ANAC58     --------->ARR11(3)              <-----------RAV1(2)         --------->AGP1          <---------ANAC55(2)  <---------ARR14(2)            <------ZmHOX2a(2)             <---------AGP1         <---------LBD16       --------->ARR14(2)           --------->AGP1  ----------->GT1--------->ARR14(2) ----->GAMYB<---------CCA1(2) <---------CCA1(2)             --------->ARR11(3)             --------->ARR11(3) ------>RAV1(1)=============HOX2a_HOX2a                     --------->ARR14(2)            <---------CCA1(2) ---->MYB52(1)<---------GLK1(1)<---------ARR11(3)           <---------ARR14(2)   ---------->DOF2   acagaatcaaacacggatctctcctcattcacagatcttcccatactcaaacaattcatatagatccagctgatcagacgattaaaagacacagatctaa  12820500                                 <---------WRKY18(1)                                --------->WRKY12                                ----------->HVH21                                --------->WRKY45                                --------->WRKY38(1)                               <---------MYB52(1)                              --------->At4g35610                          --------->GLK1(2)                          <---------ARR14(2)          <---------TOE1(2)                          --------->ARR14(2)        <---------LBD16                         <---------HSFB2a(1)        --------->TOE1(2)                      ========================HOX2a_HOX2a                                       -----                      <------ZmHOX2a(1) ===============================HOX2a_HOX2a         <---------ANAC58              <---------------AGL15    <------ZmHOX2a(2)                       <----------DOF2 <-----              --------------->AGL15    ================================HOX2a_HOX2a         <---------ANAC58             ----------------->AGL3    ====================================HOX2a_HOX2a     <---------ANAC46         <---------ANAC58<---------GLK1(1)         <---------ANAC58   ----------->GT1  ------>ZmHOX2a(2)         <---------ANAC58--------->GLK1(1)         <---------ANAC58 <------ZmHOX2a(1)--------->ARR14(2)    <---------GLK1(2) =========================HOX2a_HOX2a          =========================HOX2a_HOX2a  --------->ANAC58   ----------->GT1  <---------ARR14(2)        ==============================HOX2a_HOX2a  --------->ANAC58  ----------->GT1   --------->ARR14(2)        =============================HOX2a_HOX2a ---->DOF2   <-----------------AGL3-------->ZAP1   <---------ANAC46 ==========================HOX2a_HOX2a ============================HOX2a_HOX2a===================================HOX2a_HOX2a<------ZmHOX2a(2) ============================HOX2a_HOX2a------>ZmHOX2a(2)       <------ZmHOX2a(1)    <---------ARR14(2)   agacaagaatttcgagctaaaataggaaaatccgttgaccgatctcgttgaattcgtgggataagaggaaggatgtaatacctttgcgatctggcttatg  12820600                                                           --------->ATHB12                                                     --------->ANAC58                                                     --------->ANAC58                                                  ----------->HVH21                                                  --------->ANAC46                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             --------->ARR11(3)                                             <---------ARR11(3)                                             <---------ARR14(2)         <-----------HVH21          <-                              ---------->DOF2--------->ARR14(2)    <------NtERF2<----------DOF2    <-      --------->MYB52(1) =============================HOX2a_HOX2a<---------ANAC58                  <- ---->YAB1               ============================HOX2a_HOX2a <---------ANAC58              ------ ----YAB1                ------>ZmHOX2a(1)  <------ZmHOX2a(1)    <---------ANAC46           <--------   acaacgcttaacgaggcgaatgctgtccttggcaaagtctctaagaggatccacgacggaatcaatggcgtccatgtcccttcttttttttttttttttt  12820700                                                                         --------->CCA1(2)              <---------YAB1                                 <---------ANAC55(2)           <---------YAB1                                    <----------ID1      <---------ANAC58                                      <---------LBD16      <---------ANAC58                                      <---------At5g28300      <---------ANAC46                                      --------->RAP2.6(3) --------ANAC46                                            --------->MYB52(1) --------ANAC58                                         <---------ICU4  --------->ARR11(3)          - --------ANAC58<---------AHL20(2)                       <---------------AtSPL3                      - --------------->WRI1                            <---------LBD16 ---------->DOF2  ---------->DOF2   - ----------------ANAC81 <---------YAB1        *TSS     --------->ICU4   <---------ARR11(3)     <-----   tgtgtgtttcgtttttattatttgttctgaatgaaaaacaaattgtgagtcttcggaaaaattacggcaaagaagatatatagaaaaagagagagagagg  12820800                                   <---------ARR14(2)                          --------->YAB1        --------->ALFIN1            <------------CBF       <---------GLK1(2)    --------->O2                         <-------          --------->ARR11(3)       --------->ARR14(2)   --------->bZIP60(2)                  <-------     <---------O2        <---------ATHB12  --------->ANAC46    ---------->DOF2              <-------- <-----------HVH21      ------>MYB83<------ZmHOX2a(2)   ==================bZIP_DOF<---------PCF2 -------->ANAC58        ------>MYB46(1)   <---------LBD16    --------->At4g35610--------->ZAT18 -------->ANAC58       --------->WOX13(1)<---------ALFIN1    <---------At4g35610<---------ZAT18 -------->bZIP60(2)  --------->MYB46(3) <---------REM1(2)<-----------HVH21 <---------ZAT14  <-------- ----------AtSPL3    ------------>CBF  ------>ZmHOX2a(1)--------->TGA1a    --------->ZAT14  <--------   gaacgtcacatggatattgaagaaccaatcacagaccgatcctccacggagttgtgccatgtcagcaaagtcaaaactatagtgggctcgcgttgctttt  12820900    ---------->DOF2   --------->AtMYB61                    <---------ZAT2 ---DOF2                                --------->ZAT2 --DAG2                                 <---------At4g35610                 <-----------RAV1(2) -ANAC58                                --------->At4g35610     ------>ZmHOX2a(2)                 --- -ANAC46                   <---------ZAT18                    --------->ARR11(3)              <------ -ANAC58                   --------->ZAT18     <-----------GT1<---------ARR11(3)   <---------AtMYB61   tttgaccaaagcccattttaaacggctatggcactaggcactagctgagtaacattcccttcttgatcttggataacatcaggttttggtgagttttaaa  12821000                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                           <---------ARR11(3)                                                                       --------->ARR11(3)  <---------AGP1                                                                       <---------ARR11(3)  --------->AGP1                                                                       <---------GLK1(2)   --------->ARR11(3)                                  --------->ARR11(3)                 <---------TOE2(3)--------->TOE2(3)                                  --------->AHL20(1)           <----------DOF2  --------->YAB1 ------>ICU4                    ------->TEIL              ---------->DOF2      <---------ATHB12 ---AHL20(2)             <---------ATHB12        <---------YAB1<---------DAG2--------->WOX13(1)     <   atgattttaaaattttagtgatttcaaatgaatgaatatatagaaattgatatgatttttaaaagctttttgagattttcaatcaaaaccatagatctat  12821100                                                          <----------ID1                                                        ---------->DOF2                                                      --------->AHL20(2)                                              --------->MYB55(1)                                             <---------MYB111(2)                                    -                                             <---------MYB59                                       --                                             --------->AtMYB61                                     ==                                             <---------MYB46(2)                                    <-                                             <---------MYB52(2)              --------->ZAT18       <-                                             <---------MYB111(1)             --------->ZAT14       <-                                            --------->ANAC46                 <---------ZAT18       <-                                            --------->ANAC55(1)        <------ZmHOX2a(2)           <-                                            --------->ANAC58          <---------ARR11(3)           --           <----------DOF2                  --------->ANAC58          --------->ARR11(3)           <-       --------->ANAC46             ------>ZmHOX2a(1) <---------AHL20(2)     <-------TEIL --------->TOE2(3)       <---------ALFIN1      --------->AHL20(1)------>MYB46(1) --------->ANAC58           --------->TOE1(3)    --------->ZAT14          <---------AHL20(1)--------->MYB52(1)   --------->ICU4   <---------KAN4(2) ---------------AtSPL8       <---------ARR11(3)------>MYB83    --------->ANAC58----------->RAV1(1) <-   aacatgtacacacctttgtgttttgagtcaaaatattcctatatacacctaaccatttaaaagacaagtcaagatcaagtacaccagaataaccttgaga  12821200  Previous    Next  AGI:  At4g24920.1    Description:  protein transport protein SEC61 gamma subunit, putative. Identical to Protein transport protein SEC61 gamma-1 subunit (SEC61G2) [Arabidopsis Thaliana] (GB:Q9SW34); similar to protein transport protein SEC61 gamma subunit, putative [Arabidopsis thaliana] (TAIR:AT5G50460.1); similar to unknown [Populus trichocarpa] (GB:ABK93099.1); contains InterPro domain Protein secE/sec61-gamma protein; (InterPro:IPR001901); contains InterPro domain Protein translocase SEC61 complex gamma subunit; (InterPro:IPR008158) Range:  from: 12819521    to: 12820746    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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