Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->AHL20(2)                                       <---------AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(1)                                      --------->AHL20(1)                    ------->TEIL      <---------AHL20(2)                 ----------->GT1 <---------AHL20(1)             <---------AHL20(2)  --------->AHL20(1)            --------->AHL20(2)   <---------AHL20(2)                                           <------            --------->YAB1       --------->AHL20(2)                            <---------ALFIN1        --------->ZAT6        --------->YAB1                --------->AtMYB61<-----------GT1  <------   tagtttcttaacaataaaaatgtatatttcaacaataaaataaaattagttttccttccaaaccaaaaccattagcgattcacacttctctaaatacttt  12777200    <----------DOF2   <---------ANAC58   <---------ANAC58                                                                                 - ---DAG2                 --------->AHL20(2)                <---------MYB52(2)              <--------- ----DOF2      <-------TEIL     ----------->GT1     ----------->GT1                        --------->YAB1   ttgatgcttttgtaacgtccataccaatataacatggaaaaactaaaatttgactcgaaaaactaacatggttcaatagacacactagtctaatcacaat  12777300                                                                                                    <                 --------->AtLEC2                                                                   <                 --------->ANAC58                                                                   -        <---------GLK1(1)                                                                           -        --------->GLK1(1)                     --------->ARR14(2)                                   <-       <---------ARR11(3)              <-----------RAV1(1) --------->At4g35610                     <-       --------->ARR14(2)      <---------RVE1(1)     <---------WRKY38(1)                           --       <---------ARR14(2)     <---------ARR11(3)     <---------WRKY12                              <-       --------->ARR11(3)     --------->ARR11(3)    --------->WRKY18(1)                            -- --------->DOF2  --------->ANAC58<---------AHL20(2)<-----------HVH21                         -------- --GT1<------ZmHOX2a(1)      <------ZmHOX2a(1)<---------ARR14(2)       <---------ATHB12   --------->ANAC46   ttgaaagaggatatcagacatgcaaattgaaggatttttttttgtgggggtctggtcaaggagatgagactcaataactcatgttgaattccaaacaaca  12777400            --------->HSFB2a(2)                                               <-------MYC3         ------->TEIL                                                         ------->MYC2   <-----------RAV1(1)                                                        ------->MYC3   <---------ICU4               <--------ATHB1                               ======================== --------ATHB1                  --------->ATHB12                             --------->ANAC46 ---------ICU4                  -------->HAHB4                               --------->TGA1a      --- ------->HAHB4                  --------->ATHB51            <------MYB83     <---------ANAC55(2) <--- -------->ATHB51                <---------ICU4              <---------MYB46(3)<-------MYC2       ---- --------ATHB12                --------->AHL20(2)           <------MYB46(1)  <---------TGA1a    <---- --------ATHB51 <---------GLK1(1)                       <-----------RAV1(1)  <---------O2       ===== ------->ICU4   --------->GLK1(1)    <---------TOE2(3) --------->ARR11(3)    --------->ANAC55(2)<---- --------AHL20(2)              <---------AHL20(2)    --------->GLK1(2)       --------->O2       ----- ------->AHL20(2)              --------->ICU4       <---------GLK1(2)      <------------OsbHLH66----- --->RAV1(1)<---------HSFB2a(2)<---------ATHB51  --------->YAB1        --------->MYB46(3)--------->ZAT18   aataattgttgcatctagaattccaaataagaaataattgagatagttgaatcagaatatgttggtagaatgaacgaacacgtgagtagagtccccaaac  12777500                  --------->ANAC58                                                     --------->YAB1                  --------->ANAC46                                                     --------->TOE1(3)     ---------->DOF2                                                                   --------->TOE2(3)   <------NtERF2  --------->ANAC58                                                   ------->TEIL ===============bZIP_DOF                                                             --------->GLK1(2) ------>ALFIN1--------->AtMYB61                                                      <---------ARR14(2) ----MYC3     <---------ALFIN1           ---------->ID1                              --------->ARR14(2) --->MYC3   --------->SPL7             <---------MYB46(3)                            <---------ARR11(1) -----TGA1a------>NtERF2               <-----------RAV1(1)                          <---------ARR14(1) ===============bZIP_DOF           <---------AHL20(2)                          <---------SPL7 -----O2  --------->ZAT18         <---------YAB1     --------->GLK1(1)      <-----------HVH21 ---->TGA1a<---------PCF5 ------>ZmHOX2a(1)          <---------GLK1(1)    --------->DEAR3(2) ---->O2--------->At4g35610    <---------YAB1   ---------->DOF2     *TSS  --------->MYB46(3)  -------   gtggcagagaagcggaccacacgaagtcctgtttttattatttgttgccataaagaaatccaaacttgaaactgaaaccgtcgaacgaatcttaaatgaa  12777600                                                              <---------ZAT18                                                            <------MYB46(1)                        --                                                            <------MYB83                          ---                      <---------ZAT6                      <--------P                 <----------DOF2              ------>MYB46(1)  <----------DOF2          <---------MYB46(3)          <---------DAG2--- --->DOF2     ------>MYB83<-----------GT1               --------->ATHB12         <---------ALFIN1 <--   gcgaagaaggaacaccaaatagtagtcttaactctttctctctctctctctctcttactggttgggctctctgtccaaagactccacctttctctgcaaa  12777700           ------>ZmHOX2a(1)    <---------ZAT18    ------>NtERF2                              <---------CCA1(2)               <---------DAG2 ------->RVE1(1)                             <---------CCA1(2)            ------->GAMYB ------>GLK1(2)                             <---------MYB52(1)           <---------MYB52(2) ------>ARR11(3)                    ------>ZmHOX2a(1)                    --------->MYB46(3)<--------- -------ARR11(3)       ---------->ARF1 <-----------HVH21     --------->ANAC46  <----------DOF2   aatctctgccctcctactctaacatgtctccccttctcctctgtcccttatctctctctattcactcaaacaacaacgaccctttttctatttttacctc  12777800                                                                                                -----                                                                                               ------                                  <---------MYB111(1)                                         <------                                  <---------MYB111(2)                                    <---------GLK1(2)                                 ------>MYB46(1)                                         <---------ARR14(2)                            <-----------GT1           <<<<<<<<<TBF1                      --------->ARR14(2)               <---------MYB52(1)------>MYB83      <<<<<<<<<TBF1                        <------ZmHOX2a(1)    <---------ICU4        <---------DAG2        <<<<<<<<<TBF1                   <---------TOE1(3)    --------->YAB1   <---------At5g28300     <<<<<<<<<TBF1       <---------ETT(2)     <---------TOE2(3)   <---------YAB1   <-----------GT1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------TOE2(3)  <- --GT1 <-----------GT1    <----------DOF2 <<<<<<<<<TBF1  <<<<<<<<<TBF1     <----------DOF2 ----------   tcaccataataacttcccttatttaccactttaccaactacttcttcttcttcttcttcttcttctttcgacaagggattttagggtttaggattctccg  12777900       <---------ALFIN1    --------->ANAC46                                                          --------->TOE1(3)    --------->ANAC58                                                          --------->TOE2(3)    --------->ANAC58                                                          --------->YAB1   --------->SPL7                                                          <---------CCA1(2) <---------SPL7                              ---------->ID1               ------>ZmHOX2a(1) ---->LBD16                                  <---------TOE2(3)     <---------ANAC58 --->ANAC46                                ----------->HVH21       <---------ANAC58        <---------AHL20(2) ---LBD16                                <----------DOF2          ---------->ID1     --------->TOE1(3) --------------AtSPL3                  <---------ATHB12       <---------MYB52(1)     --------->TOE2(3) ------------->TaNAC69(2)          --------->LBD16       <-----------GT1 --------->TOE2(3) --------->AHL20(2)   cattgtacgccactctgttcaatacaccttggtattccccaatctttgacgttttgtattttcagtttgtcgtttccttatcttaaaccttatttaaatc  12778000                                                                             <----------DOF2                                                                     <---------AHL20(2)                                                                     --------->AHL20(1)                                                                     --------->AHL20(2)                                                                 <---------AHL20(2)                                     <---------GLK1(1)      <---------WOX13(1)                                <---------LBD16          <---------YAB1   <-----------GT1                              <---------ARR14(2)   <---------At4g35610<---------AHL20(2)                           <---------ANAC58        --------->At4g35610--------->AHL20(2)   <---------TOE1(2)       <---------ANAC58<---------MYB52(1)----------->GT1 <---------DAG2         <   gttcccaagttttttttgttttgtccatagcttatctgggtctctgttttttgagctctgtgattgttaaatttaataacttttctctcatatgtctctg  12778100  Previous    Next  AGI:  At4g24790.1    Description:  ATP binding / DNA binding / DNA-directed DNA polymerase. similar to DNA polymerase-related [Arabidopsis thaliana] (TAIR:AT1G14460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64194.1); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959); contains InterPro domain DNA polymerase III, subunits gamma and tau; (InterPro:IPR012763) Range:  from: 12777568    to: 12781698    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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