Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------>MYB83                                           ------>MYB46(1)                           --------->AGP1<---------MYB111(1)                --------->GLK1(2)                           <---------AGP1<---------MYB46(2)                <---------GLK1(2)                           <---------ARR11(3)                    ------>MYB46(1)                    <                    <---------AHL20(2)   <---------MYB59       <---------MYB59                    ---              <---------MYB59------>ZmHOX2a(2)                 <---------MYB46(2)                 <--       ============================HOX2a_HOX2a                 <---------MYB111(1)                ---       <------ZmHOX2a(1)   --------->ARR11(3)                 --------->ANAC55(2)                 <--       =============================HOX2a_HOX2a   <---------ATHB12  --------->YAB1               <--- ------AHL20(2)     --------->AHL20(2)<---------ALFIN1        --------->ANAC46  <------MYB46(1)  <--- ------AHL20(1) ------>MYB46(1)    --------->ANAC46--------->YAB1------>MYB83   <------MYB83 -------- ----->AHL20(1) ------>MYB83<------ZmHOX2a(2)   --------->WOX13(1) <---------ATHB12   ---------------   atatttcaaggacagaccaaatttaaatagatctaaaacaccacctaattcaatcacaaacttcacctaatcatacagaatttggtttcttcaaattgaa  12757400                                     --------->LBD16 ---------WOX13(1)                  --------->HSFB2a(2)                         --------->YAB1 ------>ATHB12                      <---------HSFB2a(2)             ------>ZmHOX2a(1) ------ATHB1                      <------ZmHOX2a(2)                --------->TOE2(3) ------>ATHB51                   <---------ARR14(2)              <------ZmHOX2a(2) -------ICU4                     --------->ARR11(3)             <---------ARR14(2) ------AHL20(2)                  --------->AGP1  <XXXXXXXXXXXXXXXXXXXXMIR869.1 --------->AHL20(2) ------ATHB51                    --------->ARR14(2)             --------->ARR14(2) ->AHL20(2)                     <---------At4g35610        <-----------GT1 --------->AHL20(2) >AGL15                         --------->At4g35610      --------->AHL20(2)<---------AHL20(2)  ------   taattgacaaaaacaaaaacattgagaaaactgcagatccagaagaatcaacacaaaaattaaaccgatcctaaattttaaataaaaatcaaattttcaa  12757500                                                                  <---------ANAC58                                                                  ====================RAV                                                                  ----------->RAV1(2)                                                                  <---------ANAC58                                                                  <---------ANAC46     ------->GAMYB                                                              <---------ANAC58        --------->MYB46(3)                                   --------->MYB52(1)         <---------ANAC58       -------->P                              <---------YAB1                  <-------GAMYB          ------>MYB83                            --------->YAB1                   <---------MYB46(3)      ------>MYB46(1)                <---------------AGL15                     --------->TOE2(3)         --------->MYB52(1)                --------------->AGL15                  <-----------GT1      <---------ALFIN1               ====================================================================================== ---->DOF2     <-----------------AGL3             --------->GLK1(2)       ----------->RAV1(1)     <--   aggaatcaaacacaaaaactcaaattggaatcataaataacgaggtgaagagaatttataccttggttgcctgaggcaacacatcccaaccgagacgcgc  12757600               --------->ARR14(2)               <---------ARR14(2)         --------->SPL7                            <---------ALFIN1       ----------->HVH21                      --------->ANAC58     <---------HSFB2a(2)                      --------->ANAC58                   --------->TOE1(3)     --------->HSFB2a(2)                      --------->ANAC46                   --------->TOE2(3)    <---------LBD16                         <---------ALFIN1                   --------->ARR11(3) <----------DOF2<------ZmHOX2a(2)       --------->AtLEC2             --------->GLK1(2) ===============MADS_MADS          <---------GLK1(1)        <---------ICU4     --------->GLK1(2) ---------------AGL3               --------->GLK1(1)        <---------GLK1(2)  <---------ARR11(3)   tctctttctgggacgacgatccatgtgagtatgagggaattcatgcacacgctccatctccataatctcagaatcagagaaaatcttaaacggtgtgatt  12757700                    ----------->HVH21                 <---------DEAR3(1)             --------->SPL7            --------->MYB52(1)                     --------->YAB1       --------->ANAC58                <---------ANAC46       --------->TOE2(3)     ----------->GT1       --------->ANAC58        <----------DOF2   --------->GLK1(2)                 *TSS  <-----------     ---------->DOF2----------->TGA1 <---------ANAC46    <---------MYB59        <------ZmHOX2a(1)  <---------HSFB2a(2)      --------->DAG2       <---------GLK1(2)         <---------At4g35610<-------  --------->HSFB2a(2)     ---------->DOF2    --------->YAB1  --------->ZAT6  --------->At4g35610   tgtttcagaaagccaaacggcgatgacgaaaagcttttttggtgtaaacagaatcgtagcctaaccctagtttttaagcagaggaatagcaaattgcgat  12757800                              <-------MYC3                              ------->MYC3                              <-------MYC2                              <-------PIF5                              ------->PIF5                              <-------MYC4                              ------->MYC4                              ------->MYC2                             =====================================MYC_MYB                             ===================MYC_MYB                             <---------TGA1a                             <---------ANAC46             <-------GAMYB                             <                             --------->O2                --------->MYB111(2)                        -                             <---------O2                --------->MYB52(2)                  <------MYB83                             --------->TGA1a             --------->MYB46(2)                 <--------                             ===================MYC_MYB  <---------MYB46(3)                <--------P                           <---------ALFIN1            <--------P    --------->At4g35610  <-------GAMYB                          <---------WRKY12        --------->TOE1(2)  <---------ZAT2      <------MYB46(1)                       --------->DEAR3(1)         <---------LBD16    --------->ZAT2      <------MYB83                    <---------ALFIN1              --------->TOE2(2)<---------ZAT14       <---------ANAC46               <---------ARR11(3)      --------->MYB52(1)--------->MYB55(2)      --------->TOE2(3)  <               <-----------ARR10       -------->P----------->RAV1(2)--------->ALFIN1    --------->MYB59 -CBF          --------->ARR11(3)   <---------ATHB12   <---------MYB52(1)        --------->YAB1  ---- --YAB1  ----------->GT1--------->ORA47(1)----------->GT1--------->MYB111(1)  <-----------GT1<------MYB46(1)   agagaagcagtcagaaaaatctccaccgtccacgtgtaatcaaccggtataacctgggttagttggaactgtgctggatttaaccatagttgggttggct  12757900     --------->ATHB12                                                             --------->ANAC46   <---------WOX13(1)                                                             --------->ANAC58 --------->YAB1                                                                   <---------ANAC55(2) <---------ICU4                                                                   --------->ANAC58 <--------ATHB1                   <---------HSFB2a(2)                             --------->ANAC55(1) -------->ATHB1                   --------->HSFB2a(2)                             --------->ANAC55(2) <------------ATHB5           <----------DOF2                                <----------ID1 --------->ATHB12          <---------ALFIN1                                  --------->ANAC58 --------->ATHB51    <---------YAB1                                          --------->ANAC46 ---------ATHB12  ---------->TaMYB80                                         --------->ANAC58 -------->ICU4    <---------KAN4(2)                                   ----------->GT1             --- -DEAR3(1)        <---------ARR14(2)                                 --------->HSFB2a(2) <---------AHL20(2) ---------ATHB51  --------->GLK1(2)                                  <---------HSFB2a(2)--------->AHL20(2) -------->ATHB5   --------->ARR14(2)                           <---------------AGL15    <---------AHL20(2)   caataattgatgggagagagaatatgcttccactttccagacgatgaaacaacaagaagtgcttcatatttctagtaaaacgacacgcatttaaattgga  12758000                          <-----------GT1                         --------->KAN4(2)                        --------->HSFB2a(1)                        --------->HSFC1(2)                                                ------>MYB83                        --------->KAN4(1)                                                 ------>MYB46(1)                        <---------HSFB2a(1)                                             --------->AtMYB61                --------->LBD16                                                      ------>NtERF2              --------->LBD16                                                       <---------ETT(1)            <---------LBD16                                                        --------->DEAR3(2)     <---------AHL20(2) <----------TaMYB80                                         --------->HSFB2a(2)   <---------CCA1(1)    <---------KAN4(1)          <---------LBD16              <---------SPL7   <---------RVE1(1)   --------->ARR14(2)         <-----------GT1              <---------ANAC58  <---------GLK1(2)    ---------->TaMYB80   <----------DOF2      <------------------------ANAC81  <---------ARR11(3)   <---------ARR14(2)   <---------DAG2 ------>MYB46(1)     <---------ANAC58     <  --------->ARR11(3)   <---------KAN4(2) <-----------GT1 <---------MYB59     <-----------GT1        < ------->DOF2 <---------LBD16           --------->AHL20(2) ------>MYB83 <----------DOF2 <---------MYB59   taaagatttttttttccgcgggtcgaatattccactctctaattaacttttttttcggaccaaactctcttcttctttttttcgtcccgaccaaactctc  12758100                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                               <-----                                                                                             <-------                                                                                            <--------                                                                                       <----------DOF2                                                                                  <---------HSFC1(2)                                                        <----------DOF2           <---------HSFB2a(1)                                                     <-----------GT1              --------->HSFC1(2)                                                    <---------AHL20(2)            --------->HSFB2a(1)               <---------MYB59                <---------GLK1(2)                  <---------ARR14(2)    <---------YAB1                          <---------TOE2(2)                    --------->ARR14(2)  <-----------GT1                           <---------TOE1(2)    <---------HSFB2a(2) <--------------- ---------ANAC58 ------>MYB83              ------>ZmHOX2a(1)     --------->HSFB2a(2)<-----------GT1 < ---------ANAC58 ------>MYB46(1)  --------->ICU4--------->AHL20(2)       ---------->DOF2  <----------   ttacttacgatttcggaccaaactcgaatagtcgcaatttttgtcctagattatttaactttgtctactagaagtttaagccgaattttcttttcttttt  12758200                                                                                   ---------->DOF2                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)           <----------DOF2       <-----------GT1                         ------->TEIL         ---------->ID1        --------->HSFC1(2)                        --------->ARR11(3)    <------------------------ANAC81 <----------DOF2                      --------->ARR14(2) ------->ID1                   --------->HSFB2a(1)                       <---------ARR11(3) --------GT1                   <---------HSFC1(2)                        <-----------ARR10 --------------------ANAC81    <---------HSFB2a(1)      <---------YAB1   <---------AGP1 ---------->DOF2 -------------------ANAC81    ------->TEIL           --------->AHL20(2)  <---------ARR14(2) -----------------ANAC81 <---------DOF5.7(2)         <---------ATHB51   <---------CCA1(2) --DOF2 <-----------GT1 <---------WRKY45       --------->ANAC46       --------->ANAC55(1) ---------ANAC81        <---------WRKY38(1)    --------->ANAC58       --------->ANAC55(2)     <------ ----------DOF2         <---------WRKY12 --------->AHL20(2)           <---------ANAC55(2)   --------- --------------ANAC81  --------->DOF5.7(2)     --------->ANAC58      <---------LBD16--------->DAG2   ttcttttttttttcttttttttttcgtcaacgaattttcttttttatataagcaaattattctttggataatacggatcttggtataaagcaaagggtaa  12758300  Previous    Next  AGI:  At4g24740.1    Description:  AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase. Identical to Serine/threonine-protein kinase AFC2 (AFC2) [Arabidopsis Thaliana] (GB:P51567); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.2); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.1); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO42496.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67679.1); similar to protein kinase MK5 [Mesembryanthemu Range:  from: 12754539    to: 12757783    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24750.1    Description:  similar to rhodanese-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G08920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64218.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 12758224    to: 12760918    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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