Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ATHB12                               --------->ARR14(2)                               <---------ARR14(2)                           <------NtERF2------->TEIL   ------>MYB83            <---------At4g35610   ------>MYB46(1)         <---------ZAT14                           <---------YAB1       <---------ATHB12 ------>ZAT6               --------->At4g35610                ---------->DOF2        --------->YAB1   acaccaaatgagaagagaggctgtctggctgcagaacccatcaacctattgctctgtgaacatcaaaagttatgttagaaaaaactttcacaatgaataa  12753700                                                                                                    -                                   --------->ANAC58                                               <--                                   --------->ANAC46                                              <---                                   --------->ANAC58                   --------->GLK1(2)   --------->At4g35610                           <------ZmHOX2a(1)                <-------MYC3                  <---------At4g35610                  <-----------GT1---------->DOF2            ------->MYC3     ------>ZmHOX2a(2) ------   catagtttagcttcacatataaaccctcaggactaaaaagccacgatttttgaaaactggcacatgaacaagtttctgatctcacaaatttgagctgaac  12753800    --------->AHL20(2) -------->AHL20(2) --------DOF2                         --------->ALFIN1                 --------->GLK1(2) ------DAG2                 ---------->DOF2                            <-----------ARR10           -- ->TEIL     <---------MYB46(3)  ---------->DOF2                       <---------GLK1(2)  --------->ICU4   cttttattaaacagtagttgaaaaaatcacaaaagaaagggtggaacaatgcaattgcaggtatatttgtaagaatctaatcccattcgtcagaattgtt  12753900                                                       ----------->GT1                                                     --------->ARR11(3)                                                     --------->ARR14(2)                                                     <---------ARR11(3)                                                     <---------ARR14(2)                                                   ----------->ARR10                                                  <------NtERF2                                                <---------ANAC46                ----------->GT1                                           <---------ARR14(2)         ---------->DOF2             ---            <---------YAB1                 --------->ARR14(2)       --------->ANAC58       ------->GAMYB          --------->YAB1                  <---------GLK1(1)         --------->ANAC58    --------->MYB52(1) ------->TOE2(3)                       --------->ETT(2)------>ZmHOX2a(2)    <---------SPL7--------->ANAC46   ttcttaaatccattgtaatagagaaatcgtagactcaatggtcgatatcggcgtagatcgtgaaaataaaacgaaagtcgtatggaaaatcaacgacatt  12754000                                        <------ZmHOX2a(2)                                       --------->ARR14(2)              --------->GLK1(2)                                       <---------ARR14(2)             <---------ARR14(2)                                      <------ZmHOX2a(1)               <---------GLK1(2)                               --------->TOE1(2)                  --------->At4g35610                               --------->TOE2(2)              <---------REM1(1)                 -----                              <---------ANAC58                ----------->HVH21               <------                              <---------ANAC58 --------->ANAC58   <---------At4g35610        <-------                --------->ANAC58  <---------ANAC46      <----------CDC5--------->ARR14(2)  --------->ARR11(3)                --------->ANAC46------>ZmHOX2a(1)    --------->ZAT18  --------->ARR14(2)   --------->ARR14(2)   ---------->DOF2          <---------ARR14(2) --------->ANAC58---------->DOF2             <---------ARR14(2) ------>MYB59   --------->ANAC58===============HOX2a_HOX2a    --------->ALFIN1      <------NtERF2   ttggtaaaagacagacttacgacagtagagtttcctgcgaggatcagacaaggaatgcgcagaggtgaagcagaatcggacaaggcggaagaagttctgg  12754100                           --------->ARR14(2)                           <---------ARR14(2)                           <---------GLK1(2)                        <---------ANAC55(2)      *TSS              --------->ANAC58      --------->LBD16   --------->ANAC58     --------->HSFB2a(2)--------->ANAC55(1)                                        <---------MYB46(3)     <---------HSFB2a(2)--------->ANAC46                                           ----------->GT1 ------>GT1            <---------LBD16           <---------HSFB2a(1)              <---------TOE2(2) ---ANAC46           <---------REM1(2)           --------->HSFB2a(1)       <----------DOF2 --LBD16        --------->At4g35610             <---------KAN4(2)       <-----------GT1 <-----------GT1   gtaaattccagagaagatagctaaacacggaaactcaagtgaaactggagaattttcttacaaatcgtgtagtttttctttacgctggttaaactacatg  12754200                                                    <------MYB46(1)                                                    <------MYB83                                      --------->ANAC46                  --------------->AGL15      <---------MYB52(1)                 ----------------->AGL1    ----------->GT1    <----------DOF2                   --------->ANAC58                            --------->ATHB12   <---------ANAC58                   --------->ANAC58                           <---------YAB1   <---------ANAC58      ----------->GT1  <------NtERF2              --------->ZAT6         <--------   ctgtttctttccgacgaatgccaagaagagaaaaaaaaaaacgccccgttaatttggtttgggttattgtatcactaattcttatgatgggctcatcaat  12754300                                          <---------AHL20(2)                           <---------AHL20(2)                                          <-----------GT1         <-----------GT1   --------->AHL20(1)     --------->GLK1(2)              --------->YAB1              --------->YAB1      <---------AHL20(1) <------ZmHOX2a(1)               <----------DOF2        <---------CCA1(2)   <<<<<<<<<TBF1 -YAB1  <----------DOF2       ---------->ID1 <----------DOF2   <---------YAB1       <---------ARR11(3)   ggaggagtttctttagtttatattttagttttggcctttcatattttctttgcaacttatctcttattataccatttcttcttcaatatataatccaatg  12754400                                    <---------YAB1                               <---------ZAT6                             <------MYB46(1)                          <---------ANAC58          --------->ICU4                             ------         --------->AHL20(2)  <------MYB83         --------->YAB1                <---------ARR14(2)   <---------ANAC58       <---------ANAC58 --------->WOX13(1)                   --------->ARR14(2)   ----------->GT1       <---------ZAT2  <---------ATHB12              <----------DOF2         <-----   <---------ANAC58      --------->ZAT2  --------->ICU4   --------->At4g35610  <----------TaMYB80  <-   taaatgcgttataaaatccattctcttagcttggtgttatgaaatcattcagtaatgagtagcagcattttctctttatgcatatacctctacttgtagc  12754500        <----------DOF2  <----------DOF2  <---------DAG2                                                                      --------->CCA1(2) --->At4g35610   --------->ARR14(2)                                          --------->ZAT14      --- ----At4g35610   <---------ARR14(2)                                    <------ZmHOX2a(2)    --------- --------ALFIN1 <----------TaMYB80    --------->GLK1(2)<----------DOF2<---------ARR14(2)    ---------   agcactttctctttatgcatatacctctacttgtagatagaatccaaaactaaaactcttttgaattgaaacgatccagtttacaaagatagacaaacaa  12754600  Previous    Next  AGI:  At4g24730.1    Description:  calcineurin-like phosphoesterase family protein. similar to WR3 (WOUND-RESPONSIVE 3), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G50200.1); similar to WR3 (WOUND-RESPONSIVE 3) [Arabidopsis thaliana] (TAIR:AT5G50200.3); similar to WR3 (WOUND-RESPONSIVE 3) [Arabidopsis thaliana] (TAIR:AT5G50200.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN71078.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) Range:  from: 12749771    to: 12754106    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24740.1    Description:  AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase. Identical to Serine/threonine-protein kinase AFC2 (AFC2) [Arabidopsis Thaliana] (GB:P51567); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.2); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.1); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO42496.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67679.1); similar to protein kinase MK5 [Mesembryanthemu Range:  from: 12754539    to: 12757783    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version