Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC55(1)                               --------->ANAC58                               --------->ANAC55(2)                               --------->ANAC46                                   <------MYB83                               --------->ANAC58                                   <------MYB46(1)                               <---------ANAC55(2)          --------->AHL20(2)   --------->MYB111(1)                   <---------AHL20(2)                   --------->AHL20(2)       --------->MYB111(2)                   <---------AHL20(1)           --------->ARR11(3)               --------->MYB59                   --------->AHL20(1)           <---------ARR11(3)    --------->AHL20(2)    ---------              --------->AHL20(2)               --------->CCA1(1)      <---------AHL20(2)    ---------           --------->YAB1      ----------->GT1 --------->RVE1(1)    --------->AHL20(2)     --------->YAB1           ----------->GT1--------->ANAC46 --------->AHL20(2)<-----------GT1     <---------AtMYB61          <---------YAB1<-----------GT1 --------->YAB1  --------->AHL20(1)       --------->MYB46(2)     <-------TEIL <---------AHL20(2) --------->YAB1     <---------AHL20(2)       --------->MYB52(2) --------->DAG2   --------->YAB1     <---------ICU4     <---------AHL20(1)      xxxxxxxxxxxxxxxxxxxxx --------->DOF2   --------->AHL20(2)<---------YAB1     <---------AHL20(2)      <---------MYB52(1) -----AtSPL8  <---------AHL20(2)    --------->ICU4     --------->AHL20(2)   <---------TOE2(3)   gaaaaagttcatatgataaattatattcacaaaacgtaataataagaaaatatctaattaaatttactaaatttatatgaggttaggtagcaaacataag  12740600                                                                                         <------NtERF2                                                                                       --------->ETT(1)                                                                                       <---------DEAR3(1)                                                                                      <---------ORA47(1)                                 --------->MYB52(2)                                <---------AtMYB61 >TOE2(2)                    <---------ANAC46                                    <-----------RAV1(1) >TOE1(2)                 <---------AtMYB61                               <---------AHL20(2) xx>smallRNA(se3)      <---------AtMYB61          --------->AHL20(2)     <---------AHL20(2)   agttttaagagtttggattttggaattggtggtgtttgtttctcaaacttcataaattagagtttaaaatgtttttttattttttgtggtcggcataaga  12740700                        --------->GLK1(2)                        --------->ARR14(2)                --------->AHL20(1)  --------->ATHB12                <---------AHL20(2) --------->AHL20(1)                --------->AHL20(2) <---------AHL20(1)           --------->AHL20(1)      <---------AHL20(2)           <---------AHL20(2)      --------->AHL20(2)                    --------->ARR11(3)           <---------AHL20(1)  <---------ICU4                     <---------AHL20(2) <<<<<<<<<<WRKY38           --------->AHL20(2) <---------YAB1             <---------REM1(1)           <<<<<<<<<<WRKY43        --------->YAB1  <-----------ARR10               --------->ARR11(3)         ----------->GT1      --------->AHL20(2)<---------ARR14(2)          ---------->DOF2   --------->YAB1 <<<<<<<<<<WRKY26   gttgaagttttaataaaataaaatagtatctgatcattttattggagaaaacataaaagatgtagtattttataagaactcgaattggtcaattttcaaa  12740800                             --------------->AtSPL8                   --------->ARR11(3)                   <---------ARR11(3)   <---------CCA1(2)                                   <--------                  --------->RVE1(1)    <---------ARR14(2)                                   ---------                  --------->CCA1(1)    ------->TEIL                                     <----------DOF2              --------->AHL20(1)       --------->ARR14(2)                             ---------->ID1              <---------AHL20(2)       <---------ARR11(1)                       --------->ATHB12  ---              --------->AHL20(2) ------->TEIL  <---------ARR11(3)          --------->MYB52(2)     ---      <---------YAB1   ----------->GT1<---------CCA1(2)   <----------DOF2<---------MYB52(1)<---------LBD16   atgttagtatgaaaaataaaatatctagttatatgtactcgtatctcttgatatttttggctttaacttagggatgttagtttgatttgtctttctggat  12740900                                                                                          <---------ICU4                                                                                         --------->AHL20(2)                                                                                       --------->YAB1                                                                                      <---------YAB1                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                   <---------YAB1                                                                                  --------->AHL20(1)                                                                                 <---------AHL20(2)                                                                                 --------->ATHB51                                                                                 --------->AHL20(2)                                                                                 <---------ICU4                                                                             --------->AHL20(2)                        --------->ARR11(3)                                   --------->AHL20(1)                        --------->ARR14(3)                   ---------->DOF2 <---------AHL20(2)                        <---------ARR14(3)             --------->AHL20(2)   --------->AHL20(2)                        <---------ARR11(3)          <---------AHL20(2)      <---------AHL20(2)          --------->MYB46(3)                       --------->AHL20(2)    <---------AHL20(2)          ----------------->AG                     <---------AHL20(2)    --------->AHL20(2) -HSFB2a(2)             --------->GLK1(2)      --------->AHL20(1)        <---------AHL20(1) >HSFB2a(2)      ----------->GT1               --------->AHL20(2)        --------->AHL20(1)       <-- ------>ANAC58  --------->DAG2                 <---------AHL20(2)       --------->AHL20(2)<---------AHL20(2) ------>ANAC58 ---------->DOF2                --------->AHL20(2)  --------->PCF2--------->ICU4 ------   aagccagtagtaaccaaaaaagtcaaaatcttgttggctaagtcagaaattaattaaataaacaaaagggcccattaaattaattattttaataaatatt  12741000                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                       --------->ZAT18                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                   <---------------AtSPL8                                                                   <---------------AtSPL3                                                                  <---------ANAC55(1)                          ------>NtERF2                           <---------ANAC46                        ----------->HVH21   <---------MYB46(3)    <---------ANAC58      --------->YAB1  --------->ANAC58     *TSS         --------->DAG2 --------->SPL7               <     <---------YAB1   --------->ANAC46    <-------GAMYB---------->DOF2 <-------TEIL                 -     --------->ICU4   --------->ANAC58    <---------ANAC58        <---------ANAC55(2)             --- -------ANAC46   ----------->TBP          <---------ANAC58        <---------ANAC58               ---- --->GLK1(2) ----------->GT1             <---------MYB46(3)      <---------LBD16   <---------TOE2(3)<   ctgtgtaatgatatatagtataaaacgcgaccgtctaaattcttggttgtttacgagaaaagcggattacgggtacgcttcttctaagataaatctctcc  12741100                                                                                           --------->DOF5.7(2)                                                                                           <---------MYB52(1)                                                                                          <----------                                                                                      ------>ZmHOX2a(2)                                                                                     <---------GLK1(1)                                                                                     --------->GLK1(1)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                               <-----------ARR10                                                                           <---------ZAT2 <-------GAMYB                                                                           ----------->RAV1(2)        <----------DOF2                                        --------->AHL20(2)   --------->ARR11(3) --------->GLK1(2)         <----------DOF2                     <---------AHL20(2)------>ZmHOX2a(2) ---------GLK1(2)    <---------GLK1(2)                        --------->AHL20(2)<---------At4g35610 -------->ARR14(2)   <---------ARR14(2)               <---------ANAC58     --------->ZAT2--------->ANAC46 ------>LBD16        <---------ARR11(3)               <---------ANAC58     --------->At4g35610 ----->LBD16         --------->ARR14(2)  <---------TOE2(3)  <----------DOF2<---------At4g35610 ---------ARR14(2) ----------->ARR10     <---------TOE1(3) <---------DAG2<-----------RAV1(2) <-------   ccgattctctctttttctcgctagatactctttttcttcaattagggtttcttctcgcttgccttttaattctctccagctgatctgatctccgttaccg  12741200               ------->GAMYB               --------->ZAT18               <---------ZAT18              --------->ANAC58              --------->ANAC58                   <----------DOF2         <---------At4g35610               <---------HSFB2a(1)                            <---------At1g77200      <---------At4g35610                  --------->HSFB2a(1)     <-----------TGA1       <---------DEAR3(1)    <---------ZAT14                        --------->HSFC1(2)   <---------ARR14(2)        <---------DREB2C(2)    --------->ZAT18                    <-------TEIL  <----------DOF2<---------MYB52(1)    <---------DEAR4(1)    --------->ZAT14         <---------TOE1(3) ------>MYB46(1)   --------->ARR14(2)        --------->ETT(1) <---------ANAC46           <---------TOE2(3) ------>MYB83   <---------ANAC58          <-----------RAV1(1) -HVH21 <---------ZAT6  <-----------HVH21  <---------HSFC1(2)<---------ANAC58     --------->At5g28300 --DOF5.7(2)--------->MYB52(1)        --------->CCA1(2)<---------AHL20(2)       --------->ZAT6  -----   atggagtctactgctaacgcactcgtcgtcaaggttagagatacaaccttcctttctttatttgcgaatcgtcagttttctcacagtaattgtcggtgat  12741300                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------ARR14(2)            <---------ANAC58            <---------ANAC58             <---------ANAC58           <------NtERF2                 <---------ANAC58       <---------ANAC58      <---------MYB52(1)        ------>ZmHOX2a(1)       <---------ANAC58     <-------GAMYB<---------ANAC46   <----------DOF2     ------>ZmHOX2a(2)       <---------ANAC46    <-----------RAV1(1)         <----------DOF2        --------->ARR14(2) ---->GLK1(2) --------->ARR14(2)    <-----------RAV1(1)================================HOX2a_HOX2a   tctgggttttcgtggcgatcgtctcgtttctgttgattttgttgcttgtaatcggtcctttccttttgaatttcgctatggatcgactctctctctctct  12741400                 <---------ANAC46             --------->TOE1(3)             --------->TOE2(3)             --------->YAB1                           --------->ARR14(2)          --------->ATHB12          --------->YAB1                              <---------ARR11(3)          <--------ATHB1         <---------YAB1                               <-----------ARR10           <---------ICU4        --------->AHL20(2)                            --------->GLK1(2)           --------->YAB1        <---------AHL20(2)           <---------HSFB2a(2)        ------->TEIL     --------->ICU4       --------->YAB1                --------->HSFB2a(2)       <---------CCA1(2) <---------ATHB12      <---------YAB1              <-----------GT1     <---------ARR14(2)         <---------YAB1   gtctctgtattataatcttaagtgtaattcgaaaattttccagacatacttagcagtatctgcttgaatcttatacccgaacaatgattaaaactataag  12741500  Previous    Next  AGI:  At4g24690.1    Description:  ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein. similar to unknown [Populus trichocarpa] (GB:ABK95898.1); similar to Os02g0593700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047302.1); contains InterPro domain Zinc finger, ZZ-type; (InterPro:IPR000433); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449) Range:  from: 12741043    to: 12744543    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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