Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ANAC58              --------->ANAC46              --------->ANAC55(2)              --------->ANAC58            --------->ARR14(1)           --------->ARR14(2)           <---------ARR14(2)           --------->ARR11(1)                                       --------->YAB1          <------ZmHOX2a(1)                                   --------->ANAC58                      <     --------->HSFB2a(2)                                      --------->ANAC58            --------->ANAC58     <---------HSFB2a(2)       --------->YAB1                 --------->ANAC46            --------->ANAC58  --------->GLK1(2) <---------ICU4                      --------->AHL20(2)       --------->ZAT14   <- <---------GLK1(2) --------->ICU4<---------YAB1     --------->AHL20(2)           <---------ZAT14   -- ----------------------->TaNAC69(2)             --------->ANAC58   <---------ATHB12  <----------ID1-- ------>DOF2--------->CCA1(2) --------->AHL20(2)--------->ANAC58 --------->WOX13(1)--------->YAB1  <-   aaagattctagaggatacgccattaatacacatttattattctgaacaccaagaaaaaataaacaagcaatcaaaaattccactatagtgacaagaacag  12730400              --------->YAB1                                               --------->YAB1    <----------DOF2                                                       <---------YAB1 ----------DOF2                     ----------->GT1               <---------YAB1 --------HSFB2a(1)         ------->MYC3                         --------->YAB1 ------->HSFB2a(1)         <-------MYC3                        ----------->GT1 ------->HSFC1(2)          ------->MYC2                       <---------WOX13(1) --------HSFC1(2)          <-------MYC2                    <---------TOE2(3)              <---------ATHB12   aactttctttagaaaattgtaatctagcacatggaagagagtaagtagaaacttacaatttgagattgataattctatcatcgtcttcttcaatcttgct  12730500                                             <---------MYB46(3)                                          <---------MYB46(3)                                         <---------AtMYB61                                         --------->ALFIN1                                       <---------ANAC58                                       <---------ANAC46                              --------->GLK1(2)                             --------->ARR14(2)                             --------->ARR11(3)                             <---------GLK1(2)        ------->PIF5                            --------->HSFB2a(1)       <-------PIF5                            <---------HSFC1(2)      <---------LBD16                            <---------HSFB2a(1) <---------GLK1(1)       --------->ANAC46                            --------->HSFC1(2) <---------ARR14(2)    --------->TOE2(2)          -----                           ----------->ARR10<---------ANAC46 ------->MYC3                 ------->TEIL                   --------->MYB52(1)  <---------ANAC58      <-------MYC3        <-----------HVH21          --------->At4g35610<---------ARR14(2)--------->ARR14(2)  ----------->ARR10   <---------ATHB12   atagttgcaagatgctgaagacaacgaagaagattctgaagccgtggtggataccacgggccatatgctaacatacgctgttctgtcccatgaatctcct  12730600                                                                                      --------->TOE1(1)                                                                                     <---------LBD16                                                             ------>MYB46(1)---------->DOF2    ------                                                             ------>MYB83 --------->ANAC58--------->ARR14(2)                                --------->At4g35610         ----------->RAV1(1)     --------->TOE1(2)                                <---------At4g35610     <------ZmHOX2a(1) --------->ANAC46--------->GLK1(2)                  --------->ARR11(3)            --------->MYB52(1)        --------->ANAC58<---------ARR14(2)                  --------->GLK1(2)            <---------WRKY12<---------ARR11(3)   --------->TOE2(2) ->ZmHOX2a(1)     <---------ARR11(3)           <---------WRKY38(1)    ------>ZmHOX2a(1)  <---------GLK1(2)   cgttctctatcacccttcaaaatctttagaatcaagctgaagttgatggccaacgagaggaccaacatattcctccaagaaagaaacctcggaatctgtc  12730700                                                                                       --------->ARR11(3)                                                                            <---------ZAT2                                                                            <---------At4g35610                                                                            --------->At4g35610                             --------->ANAC46          *TSS    --------->At4g35610 ---------->DOF2                             --------->ANAC58       ---------->DOF2  --------->ALFIN1  <---------ARR11(3)                             --------->ANAC58     <---------------AGL15   <---------GLK1(1) <-------- ---->ID1            --------->ANAC46             ===================================================   ccattttctctcaaaactaaaacacaaaaccaagaaacaagaatgcaaaatgcttaaagaagaagagcagagtgggatagctggataaagacctctttta  12730800                                                   <---------At4g35610                                           ------>ZmHOX2a(1)                                           <---------------AGL15                           <---------     ---------->DOF2    <---------ANAC46   <----------DOF2                              --------->YAB1 <----------ID1      --------->ALFIN1     <-----------------AGL3       <---------YAB1 --------->AHL20(2) --DOF2      <---------MYB52(2)          ------>ZmHOX2a(2)          <---------YAB1    <---------AHL20(2) ==========================================================MADS_MADS--------->ICU4----------->GT1   aaaaaaacaaaggaaacaaacaagtggtgtccaacgagactgatcctttttttggctgatattcgaagttatgatttttgtaagagattaaaataaccct  12730900                                                                                            <--------                                                                                          --------->YAB1                                                                    <---------MYB59      <---------ATHB12                 <---------TOE2(3)                       ------>MYB46(1)                ------>MYB83                --------->DAG2                           ------>MYB83                   ------>MYB46(1)               ---------->DOF2                         <---------MYB111(1)             --------->WOX13(1)   --------->GLK1(2)       --------->YAB1              <---------MYB59             <-----------GT1  <---------GLK1(2)        <-----------GT1             <---------MYB46(2)       <---------ICU4 --GT1        --------->CCA1(2)                      ------->TEIL ------->TEIL --------->ICU4       <   tgaagaatctcaagagataaaggtatgtataacaatgtgtttatattggattacgaacctaactcatgtacttaactcataaatattaccaatcacgatt  12731000                                                                                         <-----------HVH21                                                                                       --------->DAG2                                                                                     ---------->DOF2                                                                                  <------ZmHOX2a(2)                                                         --------->RVE1(1)      <------ZmHOX2a(1)  --------->ARR11(3)                                --------->YAB1           <------NtERF2 -YAB1                                            ------>MYB46(1)            <---------At4g35610 ---------TOE2(3)   ------>ZmHOX2a(1)             ------>MYB83          <---------ATERF1(2)   ttaagaaattgaatttttaatcctagtagacaaattctaaactgagactacctatcaaaatacctgtagaattgcaggcagaggatcaaaaggtcacaga  12731100                                                                                 <----------DOF2                                                                      <------MYB83                 --                     ------>ZmHOX2a(2)                                <------MYB46(1)     <----------                  <------ZmHOX2a(1)                                  --------->MYB59   --------->MYB52(2)              ---------->DOF2                                 ----------->GT1 <---------ARR11(3)   --           --------->At5g28300                             --------->GLK1(2)  --------->ARR11(3)   --       ----------->RAV1(1)      <----------DOF2    ---------->DOF2 --------->ICU4--------------------   acaaattggccacagtgaaaggatcgctagaaggctttttatatgtaaactgaaaaagaagaatgtgtaattaggtcgaagctctttgtttgtttctctc  12731200              ----------------->AGL1              <<<<<<<<<<<<<<<<<LFY             <-----------------AGL1         <---------RVE1(1)         <---------CCA1(1)        --------->AHL20(1)                          --------->REM1(2)        <---------ARR11(3)                         ----------->HVH21    ---------->DOF2                              <---------ANAC46                                ---- ------->ANAC58                                  <---------ANAC58                               ----- -GT1   <---------AHL20(1)   --------->ARR11(3)  <---------ANAC58       <---------MYB52(1)      ----- ------->ANAC46          ---------->DOF2    <----------DOF2      <----------DOF2      <---------ARR14(2) ------->ANAC58      <----------ID1        <---------ANAC58      <---------DAG2       --------->ARR11(3) ->WRI1 --------->ARR11(3)--------->DAG2   <---------ANAC58    <---------At4g35610    <---------ARR11(3)   cacgataaaagatatttcccattgggaaaaagttattgtattttggctttggcgtgaagagtttcagcttttcggtttgtcaatggcagaccttggaaac  12731300  Previous    Next  AGI:  At4g24670.1    Description:  alliinase family protein. similar to alliinase C-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64270.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Allinase, C-terminal; (InterPro:IPR006948); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421) Range:  from: 12727844    to: 12730755    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version