Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ---------->DOF2                                      --------->GLK1(2)                             --------->YAB1           --------->ANAC58     --------->AHL20(2)                           --------->AHL20(2)<---------TOE2(3)             <---------AHL20(2)  ------             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ANAC58   <----------DOF2<---------ARR14(2)    --------->AHL20(2)   <----------DOF2  <----------DOF2                --------->TOE2(3)   <------- --------->GT1   <-----------GT1--------->YAB1<---------YAB1   --------->ANAC46<---------AHL20(2) -------->AGL1--------------->AtSPL8--------->DAG2  <---------AtLEC2   <---------YAB1   --------->ARR14(2)   ttagaaaaaaattcaatttgtacttcccttttaataataaagggatttatgtttgcaaggtatacatgtcatcatctttaaataatcgagaattcgtttg  12714200                    <---------HSFB2a(1)                    <---------HSFC1(2)             <-----------GT1                    --------->HSFB2a(1)        --------->AHL20(2)                    --------->HSFC1(2)         <---------AHL20(2)         --------->TOE2(3)                <---------YAB1         --------------->AGL15          --------->AHL20(2)         <---------------AGL15          <---------AHL20(2)         --------->TOE1(3)             <---------AHL20(2)       <---------TOE2(3)               --------->AHL20(2)                 --------->ANAC55(2)      <-----------GT1     ------>ZmHOX2a(1)   <---------AHL20(2)          <---------ANAC55(1)    <---------AHL20(2)<-----------GT1  --------->AHL20(1)                 <---------ANAC55(2) ----->GT1  <---------AHL20(2)         <---------AHL20(1)           --------->AHL20(2) --MYB52(1)--------->AHL20(2)<---------CCA1(2)--------->AHL20(2)    <---------AHL20(2)          <----   taaaattttaacattaaatggaattttcctcatctctacaatttatttttaaattacaaactttcaaagttttattaagtgtctattcaaacatgtcaaa  12714300                                                                                <---------YAB1                                                                       <---------ICU4                                                                      --------->ICU4                                                                      <---------YAB1      --------->ATHB12           --------->AHL20(2)                 --------->YAB1 <---------WOX13(1)   ---------->ID1       <-------TEIL                               <------ZmHOX2a(2)               <- -----GLK1(2)        ----------->GT1                      --------->ATHB12    --------->YAB1     ----   ttcttggctcattgagaaggaacaggttcaaacaattcaatagaattagtcaaaaccagttgatttgcgatcataatcaattgtaattgatagtcaattg  12714400                                      <---------MYB46(3)                                    <---------ANAC58                                    <---------ANAC58                                    ------->GAMYB                                    <-------GAMYB                                     ------>MYB83                                   <------MYB83                                       ------>MYB46(1)                                   <------MYB46(1)            ------->TEIL            --------->At4g35610                        <---------AHL20(2)             --------->AHL20(1)            --------->MYB52(1)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->YAB1                --------->MYB46(3) ---------ID1          --------->AHL20(2)           --------->AHL20(2)           <-----------GT1 ------>DOF2           <---------AHL20(2)     ------>ZmHOX2a(1)             --------->AHL20(2)   aaagacaaaatggacaatgactcaaataaatggtatttggttgttttcctacaaaaaaataatgtatcccaaaaacaaaaaaatcaccaactgaaattgt  12714500                                                                                               <-----                                                                                               ------                                                                                            ---------                                                                                          <---------bZIP60(1)                                                                                          <---------TGA2(1)                                                                                          --------->ANAC46                                                                                          <---------ANAC55(2)                                                                                          --------->bZIP60(1)                                                                                          --------->TGA2(1)                                                                                          --------->ANAC55(2)                                                                                         <-----------STF1                                                                                        <---------TGA2(2)                                                         ----------->GT1             <---------ICU4                                                         --------->YAB1              --------->ATHB12                                                 <---------ZAT18                    <---------YAB1                 <---------GLK1(1)  ----------->GT1    <------------CBF           <---------ICU4   --           <------ZmHOX2a(1)      --------->LBD16--------->ZAT18                  --------->YAB1<----        <-------PIF5         ---------->DOF2    <------ZmHOX2a(1)         <------ZmHOX2a(1)<---------        ------->PIF5 ----------->HVH21    <------------CBF        <---------TOE2(3) --------->ICU4 <-   atagtttgcacgaggaatgaaatctgacacaaaatgcgcagaaaaattgaggacactaattgtaatttgtggtttaggagataaacatgattacgtcata  12714600                                                   --------->AHL20(2) ----YAB1                                         --------->AHL20(2) --->ICU4                                     --------->AHL20(2)                           <------NtERF2 >TGA2(2)                               <---------AHL20(2)                 <---------TOE1(2) ------->AHL20(2)                 *TSS  --------->AHL20(2)           --------->KAN4(2)    ------>NtERF2 -----ICU4                        --------->YAB1--------->YAB1  <---------TOE2(2)        --------->DEAR3(1) --TGA1    ---------->DOF2 --------->TOE2(3) --------->YAB1     <---------TOE2(3)       --------->ATERF1(1) --------AHL20(2)         ----------->GT1   --------->AHL20(2) <-----------RAV1(2)     <-----------HVH21   atttaaaacaagagaaaggcagacaaaaacgtttaaacataaaaaaataaaaataaaaaaaaaactcaggttattcgctcgttcgtcttcgtcgcccatt  12714700                                                                                       --------->LBD16                                                                                      <---------ANAC46                      --------->ANAC46                                          <------MYB83                      --------->ANAC58                               <---------HSFB2a(2)                      --------->ANAC58                    <---------ANAC58     --------->MYB59                      <---------TGA1a         --------->TOE2(3)      --------->HSFB2a(2)<---------MYB52(1)                    <---------ALFIN1         <---------ICU4      <---------GLK1(1)<---------GLK1(1)    <-----------HVH21 --------->TGA1a       --------->ICU4<---------ANAC58     <---------TOE2(3) <------ZmHOX2a(1) <---------SPL7<---------YAB1------>ZmHOX2a(1) <----------DOF2<------MYB46(1)   gaaggaggtcagaccagaagtcgcacgcgagccttataattgtgtaatccttagggttttgctcgcgatttctggtactattaggtttccgtcgatttct  12714800                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                       --------->LBD16                                                                       <-----------HVH21                                                                      <---------ANAC58                                      --------->ANAC46                <---------ANAC58                                   <---------ZAT14           ------>ZmHOX2a(1) <--------P                           <------NtERF2                --------->GLK1(1)   <---------TOE2(2)                          --------->LBD16             <---------At4g35610   <---------TOE1(2)    <---          <-----------GT1 <---------SPL7 <---------ANAC46   --------->TOE1(2)<---------MYB46(3)<-----   <------NtERF2         --------->DEAR3(1)           --------->At4g35610<---------DEAR3(1)<---------   ----------->GT1      <---------LBD16 <---------------------WRI1<---------GLK1(1)     <------ZmHOX2a(1)   tcgtcgggataaaaaccctcttcttcgccggagggagaacacggcgagaattacacagctatccttcgaattccgtcgctggttagcttaggactttctg  12714900                                                          --------->ANAC58                                                          --------->ANAC58                                                 <---------HSFB2a(2)                  --------->ATHB12                                                 --------->HSFB2a(2)                  <--------ATHB1                                          ----------------->AGL1                     --------->ICU4   ---------->ID1                         <-----------------AGL1                     <---------ATHB12 <-----------RAV1(1)                      ----------------->AGL2                     <---------YAB1 ------GLK1(2)                  --------->MYB52(1)  ---------->DOF2               ------------>ATHB5 ----YAB1                 ----------->HVH21--------------->AGL15        ------>ZmHOX2a(1) -DOF2 <----------DOF2    --------->ANAC46----------------->AG          <----------DOF2 <---------WOX13(1)   attctgtcgctttaatcttcttctctccatgacacaacgggtattccaagtctggaaaggaagcaatgtaagtccttttttcatcgaatgattgagcctg  12715000                <---------ANAC58                     <---------GLK1(1)                <---------ANAC58            --------->KAN4(2)             <XXXXXXXXXXXXXXXXXXXXMIR835-3P --------->ARR14(2)      <XXXXXXXXXXXXXXXXXXXXMIR837-3P        <---------ARR14(2)   --------->ATHB12                        <---------KAN4(1)  <---------YAB1<---------ANAC46           --------->KAN4(1)  <---------AHL20(2)                 --------->At4g35610                    --------->ATHB12  --------->AHL20(2)                 <---------At4g35610                   <---------YAB1       -----  --------->AHL20(1)         <-----------RAV1(1)     --------->GLK1(1)  ------->TEIL     <---------MYB52(1) --------->AHL20(2)        <----------DOF2------->TEIL               <---------YAB1 <---------GLK1(1)   gaattttattggttttttgtgtgttttctctttgttgggagatgaatattctctgaattctgttctctggtatgaatatgatttggaattcgttttttct  12715100  Previous    Next  AGI:  At4g24630.1    Description:  receptor/ zinc ion binding. Identical to Zinc finger DHHC domain-containing protein At4g24630 [Arabidopsis Thaliana] (GB:Q9SB58;GB:Q0WWZ7); similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT5G50020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71728.1); contains InterPro domain Plexin-like fold; (InterPro:IPR016201); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 12714634    to: 12717121    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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