Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ------>ZmHOX2a(2)                            ----------->RAV1(2)                              <---------ARR11(3)                         <---------ANAC58                              --------->ARR11(3)                --------->ETT(2)                         ------>ZmHOX2a(2)                     --------->HSFB2a(2)                        <------ZmHOX2a(2)         ----------->GT1------------>AtMYB77                        <---------GLK1(1)        <---------TOE1(3)   <-------GAMYB<-----------------AG                        --------->GLK1(1)        <---------TOE2(3)   <---------At4g35610                       <---------ARR11(3)  --------->DAG2      <---------HSFB2a(2)<-----------------AGL1     --------->ZAT6    <---------AGP1--------->ZAT6          <XXXXXXXXXXXXXXXXXXXXMIR780.1--------->HSFB2a(2) -------->WOX13(1)     --------->ARR11(3)---------->DOF2<-----------GT1  <---------ANAC58 <---------HSFB2a(2)   atccatcacactaaattgtttctaagatctctgatcttaacacaaaaggttaaggttaaaaccttctcgacagttgctcgcctgtccgtcttagggaagt  12707500                                                   <------NtERF2                                                 <---------ANAC46                                                 <---------DEAR3(1)                                                <---------ABI4(1)                                                <---------LBD16                                                <------NtERF2                                                <---------At4g35610                                                --------->At4g35610                                                --------->ATERF1(1)                                               <---------DEAR4(2)                                               <---------RAP2.3(1)                                               <---------ERF1                                               <---------ORA47(2)                                               <---------RAP2.6(1)                                               <---------RRTF1(1)                                               ------>NtERF2                                               <---------ATERF1(1)                                              <---------RAP2.3(3)                                              <---------RRTF1(2)                                              <---------RRTF1(3)                                              <---------RAP2.3(2)                                              --------->ATERF1(2)                                              <---------DEAR3(1)                                              <---------ATERF1(2)                                              --------->DEAR3(1)                                             <------NtERF2                                             --------->ATERF1(1)                                             --------->RAP2.3(1)                                             <---------ABI4(1)                                            <---------RAP2.3(1)                                            ------>NtERF2                                            <---------ATERF1(1)                                            <---------RRTF1(1)                                            <---------ORA47(2)                                            --------->LBD16                                           <---------DEAR3(1)                                           <---------ATERF1(2)                                           --------->ATERF1(2)                                           <---------RAP2.3(2)                      ------>NtERF2        <---------DREB2C(2)                  --------->ANAC58         <---------RAP2.3(3)                  --------->ANAC46         --------->DEAR3(1)                  --------->ANAC58        --------->ATERF1(1)                 <-------TEIL             <---------LBD16                --------->CCA1(2)        --------->MYB52(1)            --------->At4g35610                --------->ARR14(1)       ------>NtERF2                 <---------At4g35610               --------->ARR14(2)        <---------ATERF1(1)      --------->HSFB2a(2)               --------->ARR11(1)     <---------ZAT2          --------->ZAT18                  ------               <---------ARR14(2)     --------->At4g35610     <---------ZAT18            <---------At4g35610             ----------->ARR10        <---------At4g35610    <---------ANAC58       <---------ARR14(2)         <---------ZAT2               --------->ZAT2         --------->ANAC55(2)    >>>>>>>>>GATA-4         ----------->RAV1(2)          ----------->RAV1(2)    <---------ANAC55(1)    >>>>>>>>>GATA-1         <---------At4g35610     ------>ZmHOX2a(1)--------->LBD16 <---------HSFB2a(2) <-------TEIL---         --------->ZAT2   <---------MYB52(1)<---------ERF1   <---------ANAC58       >>>>>>>>>GATA-2       <---------ALFIN1<------NtERF2<-----------RAV1(2)      <---------ANAC46       >>>>>>>>>GATA-3<-  <---------MYB46(3) --------->DEAR3(1) ----------->HVH21    <---------ANAC55(2)  <---------MYB46(3)   gagtttgttccacctgagatacgccgtcgttaatcctcccagctgccggcggcggagaaaattgcgtgctagaagctgaatcggtggattcatcttcctc  12707600                                        ------>MYB46(1)                                        ------>MYB83                                       --------->ORA47(1)                                      <---------MYB111(1)                                      --------->MYB46(3)                                      <---------MYB55(2)                                      <---------MYB46(2)                                      --------->DEAR4(1)                                      --------->DEAR3(1)                                      --------->DREB2C(2)                                  <---------ABI4(2)                                 --------->ANAC58                            --------->YAB1                                <---------ZAT18                     --------->TOE1(1)                         <---------DEAR3(2)                        <---------LBD16                         <---------MYB46(3)                      <---------TGA1a                       <---------MYB52(1) --------->AtMYB61      --------->ZAT2 >ZmHOX2a(1)         --------->TGA1a --------->DEAR3(2)          <---------ZAT2    --------->YAB1  <- ------>LBD16        --------->O2--------->ANAC58           --------->At4g35610 --------->YAB1     -- --------CCA1(2) <-----------HVH21--------->ZAT18           <---------At4g35610<---------YAB1     ---   cgtatcaccatcaaatctaggtcccgtctgttcgcgcgcaccgaccaaagtctctcttgatgagctcacctcggagtaagtataataagaagaatttctc  12707700                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---             --------->ANAC58                                                                    <---             --------->ANAC58                                                                    <---             --------->ANAC46                                                                    ----            ------>MYB46(1)                                                                      ----            ------>MYB83                                                                         <---           --------->MYB52(1)                                                                    <---          --------->AtMYB61                                                                      ----         --------->MYB46(3)                                                                      <---         <---------MYB52(2)                                                                      ----      ----------->HVH21                                                                          <---   --------->TOE1(2)                                                                   --------->At4g35610  <---------At4g35610                  --------->LBD16                                 <---------At4g35610  --------->ZAT2           --------->ZAT14                            <---------------AtSPL8    -----  <---------ZAT2         --------->ANAC58                             --------------->AtSPL8  -------  --------->At4g35610    --------->ANAC58                       --------->ANAC46   <-----------HVH21 --------->ARR14(2)   <---------ZAT18<---------LBD16           <---------LBD16     <-----------TGA1-- --------MYB52(1)   --------->ZAT14 <---------LBD16            ------>ZmHOX2a(1)--------->ARR14(2)<-- ------->LBD16 --------->ZAT18  --------->ZAT14------->TEIL    --------->LBD16 <---------CCA1(2)<---- ------>ANAC46------->GAMYB<---------ZAT14 <-----------------------TaNAC69(2)--------->YAB1   -------   ccgtagctgcgaccaacggcactggacactctactgttctcgggagacgaatcgagagagacatcctcggaatttgtactcatatcgtcatcggaagtga  12707800       --------->ANAC46 ----->TGA2(1) ------ANAC58 ------ANAC58 ------ANAC55(2) ------bZIP60(2) ------ANAC46 ----->bZIP60(1) ----->O2                                                     --------->ANAC58 ------bZIP60(1)                      --------->ZAT2          --------->ANAC55(2) ------TGA2(1)                        <---------At4g35610     --------->ANAC58 ----->bZIP60(2)             --------->LBD16                  --------->ANAC46 ------O2--------->MYB46(3)<-----------------AGL1   <-------MYC3 ----->TGA1a               <---------LBD16         --------->ANAC58 ------TGA1a               ----------------->AGL1  --------->ANAC58 ------>STF1            ----------->HVH21          --------->ANAC46 ---->HVH21             --------->WRKY38(1)        <---------O2 ------->TGA2(2)      <---------At4g35610     ----------->HVH21            <-----------RAV1(2) ---------TGA1    <---------ARR14(2)  --------->At4g35610    <---------LBD16       --------->TOE2(3) -------STF1 <---------STY1(1)        <---------ZAT2------->MYC3 ------->TEIL--------->ANAC58  <----- ---->TGA1   --------->STY1(1)      <------ZmHOX2a(1)      <---------REM1(2) --------->ANAC58 <------   cgtcagtatcagccactagggttctggtgaccggaataggagctgagggtgacacgcggtcttcacggaccttgagagcaggtaatctcaattctccgtt  12707900                                                                                             --------   --------->ATHB12                                                                          <-------  <------ZmHOX2a(2)                                       <------ZmHOX2a(1)                  <-------  <---------YAB1                             ---------->DOF2                    <---------ATHB12 ----MYB52(1)                        --------->ALFIN1--------->ALFIN1      <---------At4g35610      < -GAMYB                          <---------ZAT14  --------->ALFIN1    <------------CBF <----------DOF2   ggggatcattgtgaaatgcgaagttgaaatcgaagcacagtgtgagtaaaaggaggtggaggaagttgctaaaattgagctaatgaagtctttctctaga  12708000           --------->ARR11(3)    ==============================HOX2a_HOX2a <---------ARR11(3)              <------ZmHOX2a(2) --------->ARR11(3)             --------->ARR14(2)                   --------->TOE1(3) <---------GLK1(2)              <---------ARR14(2)      <------ZmHOX2a(1) ->HSFB2a(2)             <-----------HVH21--------->ARR11(3)         --------->TOE2(3) --HSFB2a(2)            --------->TOE2(3) <---------ARR11(3)<----------ID1 --------->YAB1 --HSFC1(1)<---------ARR11(3)   --------->AGP1 ------------>CBF  ---------->DOF2   <----------DOF2 ---------RVE1(1)       --------->TOE1(3) <---------GLK1(2)--------->ATERF1(1)---------->DOF2   agagatttttgaagaactcagagaaaccttcacagatcgagctagattttgcaatggaggagacgacgaaagcttaatcagaaagctttctcacagagag  12708100                        --------->ZAT18                        <---------ZAT14                        --------->ZAT14                        <---------ZAT18                            <----------DOF2                  <---------ARR11(3)            ---------->ID1     <---------DAG2            --------                  --------->ARR11(3)        <----------DOF2       <---------ANAC58     <---------YAB1                 <---------GLK1(1)          --------------------->WRI1           <-----------GT1  <--             <---------WOX13(1)          <-----------GT1          <---------ANAC58  <----------DOF2            <------------CBF       --------->ICU4               <-----------GT1  <---------AHL20(2) <   agagggagagagacgattgatatctgtgcacttcaaaatgatttttctttgttttttttgatatttttgctttttgttagtatttacttttgattttgaa  12708200                                                                                   <---------At4g35610                                                                                   --------->At4g35610                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                 --------->SPL7                                                                         <---------ANAC58                                                 <------MYB83  ---------->DOF2   --------->ZAT14                                                 <------MYB46(1)      --------->ALFIN1           <---------------AGL15               <--------P    --------->LBD16     <---------ZAT18           --------------->AGL15     --------->ANAC58      ------>MYB83 <------NtERF2          ------       --------->GLK1(1)             --------->ANAC58      ------>MYB46(1)       --------->ZAT18 --->GT1  ----------------->AGL1    --------->DAG2       --------->AtMYB61   <---------------AtSPL3 < -------AHL20(2)                 <------ZmHOX2a(1)     <---------ARR11(3)<---------ANAC58  <---------ZAT2 ------------CBF    ---------->DOF2---------->DOF2     --------->ARR11(3)<---------ANAC46  --------->ZAT2   aaaattgggaattcaaatttgggaaagggtagagaggaaaagcaatcgagttggtaagacctccccaaagcggtgtcgtttagtacgctcaccagcttga  12708300                           <---------bZIP60(2)                        <---------bZIP60(1)                                                <---------AHL20(2)                        ----------->HVH21                                                 --------->AHL20(2)                        --------->bZIP60(1)                                               <---------AHL20(2)                     --------->ICU4                                                       <---------AHL20(1)                     <---------ZAT6                                               --------->TOE2(3)              <---------ANAC46                                                    --------->TOE1(3)            --------->MYB52(1)                <---------ARR11(3)                 ----------->GT1 --->ATHB12----------->HVH21                  --------->ARR11(3)    ---------->DOF2   <---------YAB1 ------ZmHOX2a(1) <--------P     ---------->DOF2               ----------->GT1 <-----------GT1   ----   taggagctatggcataacgggtagtgatgacatgggaaagcgattcaacatcttggttttgaaaattgataaaagggattgtaacgttataatttttttg  12708400  Previous    Next  AGI:  At4g24610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65440.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65440.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61624.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22682.1); similar to hypothetical protein OsJ_008178 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24695.1); contains InterPro domain Globin-like (InterPro:IPR009050) Range:  from: 12700607    to: 12707909    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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