Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>MYB83                                                                 --------->GLK1(2)                        <---------HSFB2a(2)                     --------->ARR14(2)             <---------ANAC46    --------->ARR11(3)             <---------ARR14(2)             <---------YAB1    <---------AHL20(2)               <---------GLK1(2)             <---------ANAC55(2) <---------ARR11(3)         <-------TEIL <---------MYB59        <----      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->ARR14(2)      <----------DOF2     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <---------GLK1(2)------>MYB46(1)  <--------    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ---------->DOF2  <---------ARR14(2)  <----------DOF2   ----- ---ZAT14   --------->MYB59   --------->AHL20(2) --------->AHL20(2)   <---------WRKY18(1)<-----------GT1   ctactactacgagttatgtatgagttgcagaaataaatcttttgaaagaaaaaaaattcagattcagattcttgaccaaactttctttgtttcactttgt  12699600                                                                                       --------->At4g35610                                                                                     <---------GLK1(2)                                                                                    <---------ZAT2                                                                                    xxxxxxxxxxxxxxxxx                                                                                    --------->ZAT2              --------->DAG2                                    <---------MYB46(3)------->GAMYB             ---------->DOF2                                    <------MYB83     --------->MYB46(3)          --------->AHL20(2)                                <-----------RAV1(1) -------->P      <---------AHL20(2)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxx      --------->AHL20(2)                              <<<<<<<<<TBF1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----HSFB2a(2)       ---------->DOF2            <----------DOF2<------MYB46(1) ------>MYB46(1)   <-- --DOF2--------->AHL20(2)                     <-----------GT1 <--------P    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---->HSFB2a(2)----------->GT1          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ------>MYB83------->TEIL   agaagaaaataaataaaaagtaaacaaagatgagaagaagtttttgtttcactttcttcttcttgttggtgactctgtttccaaccagcttctgcatctc  12699700                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                       --------->AHL20(2)           <-----------GT1                           <---------AHL20(2)  --------->TOE2(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------AHL20(2)   <---------YAB1 --------->ANAC46                               <---------AHL20(1)     --------->ARR11(3) --------->ANAC58                               --------->AHL20(1)     <---------ARR11(3) --------->ANAC58                           <---------AHL20(2)  ----------->GT1                <----- xxxxxx>smallRNA(si3) --------->ICU4       --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxsmallRNA(si3) <----- xxxxxxxxxxxxx>smallRNA(si3) ------------>CBF  --------->AHL20(2) --------->ICU4               <----- -------REM1(2)   <-----------HVH21----------->GT1 --------->AHL20(2)<---------YAB1    <---------TOE2(3)   tacaagcaagttgttaccagtgtcatacttatccaattagttatattaaatatataaatttatatgtagttattatcttagaaaaatttaagtttttgct  12699800                              --------->AHL20(2)                              <---------AHL20(2)                     <---------ICU4              ---------->DOF2                     <-----------GT1<---------AHL20(2)                                    <-------TEIL                  --------->YAB1   --------->AHL20(2)                                   <---------SPL7                  <---------ICU4   <---------AHL20(1)               ---------->DOF2   --------------- ----ANAC58      <---------AHL20(2)--------->AHL20(1)           --------->TOE2(3)     --------------- ----ANAC46   <---------AHL20(2)   <---------AHL20(2)          ----------->GT1    --------->GLK1(2) ----ANAC58  --------->AHL20(2) <---------AHL20(2)   <---------GLK1(2)       ---------->DOF2    <----   tatgttttgtttatattaaataataactacatataaatttattagataaaaaaaagattagcaaaatgttaaaagcactaaaagaatcgacgtacaaact  12699900                         ----------->TBP                         --------->AHL20(2)                         <---------AHL20(2)                       <---------AHL20(2)                     ----------->TBP                     --------->AHL20(2)                   ----------->TBP                                                   <------MYB46(1)                 --------->AHL20(2)                                           ---------->DOF2       ----------->GT1 --------->AHL20(2)                                --------->AtMYB61       --------->ATHB12----------->TBP                                  --------->MYB46(3)      <---------YAB1 <---------AHL20(2)                               --------->ANAC46             xx >AtSPL3         <---------AHL20(2)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) >AtSPL8   --------->AHL20(2)    --------->ANAC46             --------->AHL20(2)     ----------->GT1 ------DOF2<---------AHL20(2)<-----------GT1                  <---------AHL20(2)     <------MYB83 ---   ttcattagatgattaaaatttatatatatatataccctctacttatactcttaacttcaccagtttaatttcccaccatcaaaagcttggtaactatgga  12700000            <---------ZAT6      --------->LBD16     <-----------RAV1(2)        <-----------GT1   <------ZmHOX2a(2)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->CCA1(2)     --------->TOE2(3)  --------->AGP1        ----------->GT1                            ---------->DOF2             <xxxxx  --------->ARR11(3)    <---------ZAT6                      <---------YAB1                <---------AHL20(2)  <---------ARR14(2)<---------AHL20(2)                  <---------ARR14(2)       <-----------GT1  --------->ARR14(2)<---------AHL20(1)                  --------->ARR14(2)      <---------AHL20(2)  <---------ARR11(3)--------->AHL20(2)                  ------->TEIL ----------->GT1--------->TOE2(3) xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      <---------CCA1(2)  <---------TOE2(3)<--------- ------->DOF2       --------->AHL20(1)         <---------YAB1--------->ATHB12  --------->AHL20(2)   gaaagatccaggtactgttcaatttattgttaatttcccttacattgttttgattttgtatcttcattgtaaagttaagaattttatcttattttatctc  12700100                                                    <------MYB83                                                    <------MYB46(1)                 ----------->GT1                                          <-------GAMYB                             <-------TEIL                           --------->GLK1(1)       <---------AtMYB61             ----------->GT1                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          <---------ARR14(2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <--------P               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ALFIN1            <-----------RAV1(2)               --------->AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx               --------->ATHB51          <-----------RAV1(1)           <---------TOE1(3)              <---------YAB1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->ICU4         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <-------TEIL            --------->YAB1--------->ARR14(2)  <---------ANAC46         <---------AtMYB61            -         ------>ZmHOX2a(1)<---------GLK1(2) <---------ANAC46           <---------TOE2(3)  xxxxxxxxxxx         <----------DOF2xxxxxxxxxxxxxxxx>smallRNA(i)----------->GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <--------Pxxxxxxxxxxxxxxxxx --GT1---------->ID1<-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   attgttttgtcctttcattatttatccagatttcgcagtctctctgttgtgggatggtgaaaacacccctgttgaggttgatcaggtagataatttgata  12700200                                     --------->ARR11(3)                                    --------->GLK1(1)                                    <---------GLK1(1)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          --------->WRKY38(1)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          --------->WRKY12                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        ----------->RAV1(2)                  >>>>>>>ZML2                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->HSFC1(2)                  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->HSFB2a(1) --------->ARR11(3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <------MYB46(1)     --------->GLK1(2)             xxxxxxxxxxxxxxxx>smallRNA(i)               <---------HSFB2a(1) <---------ARR11(3)         --------->HSFC1(2)        <---------ARR11(3)   <---------HSFC1(2)  <-----------ARR10         <---------HSFC1(2)        --------->ARR11(3)   <------MYB83   --------->AtLEC2 x>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxsmallRNA(i)           -------- ---------->RAV1(1)     --------->At4g35610      ---------->DOF2   <---------PCF2   <----------DOF2 xxxxxxxxxxxx>smallRNA(i2)----------->HVH21      xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    xxxxxxxxx xxxxxx>smallRNA(si3)   <---------At4g35610    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------DAG2xxx   aacaacattgaagcttctgtgagaactgctgacccaagatatcatcttgctcaaaggaaggttctagtgggacatgaaaatctcgactttatcaaggaga  12700300                                                                                              <xxxxxx                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            =========                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                         ------>MYB83                                       =========                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               ---------                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              ---------                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               ---------                       --------->ARR14(2)------>MYB46(1)                                   <---------                      <---------GLK1(1) <xxxxxxxxxxxxxxxxsmallRNA(i)                   --------->YAB1                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <---------TOE2(1)     <---------ALFIN1               ----------->HVH21<---------ICU4                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <---------TOE1(1)     --------->AtMYB61      <-----------HVH21<xxxxxxxxxxxxxxxxxxxxx                <-------TEIL          --------->MYB46(3)     <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxx             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------ANAC58 xxxxxxxxxxxxxxxxx>smallRNA(si3)            xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <--- ---------->DOF2xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ARR14(2)   xxxxxxxxxxxxxxxxxxx>smallRNA(si3) ->YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->ARR14(2)<---------MYB46(3)--------- xxxxxxxxxxxxxx>smallRNA(fl3)<----------DOF2         ----------->GT1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------MYB55(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<-------   atgaaaagtctctacaggtacaaggtttccgcttgatcaaaccaccctatcgagagcgtaaatgcgtcatatgtgatggttcagttcaaacatcacgtca  12700400                                 ----------->HVH21                               <---------ZAT2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->ANAC58              --------->ZAT2 --------->ANAC46          <---------ANAC58 --------->ANAC58          <---------ANAC46 xxxxxxxxxxxxxxxxxsmallRNA(si3)<---------At4g35610 ----TGA1                  <---------ANAC55(2) >TGA1a                    --------->bZIP60(1) -TGA1a                    --------->ANAC55(2) -bZIP60(1)                <---------ANAC58 -O2                       <---------bZIP60(1) >bZIP60(1)                <---------bZIP60(2) =============MYC_MYB      <---------REM1(1) -ANAC55(2)              <---------TGA2(2) >ANAC46                ----------->TGA1 >ANAC58                ----------->HVH21 >ANAC55(2)          <xxxxxxxxxxxxxxxxsmallRNA(i) >ANAC55(1)         <----------DOF2 ==============================bZIP_DOF >O2 -------->P     <---------DAG2 <xxxxxxxxxxxxxxxxxxsmallRNA(si3) >ANAC58           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) >bZIP60(2)       xxxxxxxxxxxxxxxx>smallRNA(i)                    ---------->DOF2               ----- --STF1     <---------ANAC58  ------->TEIL  --------->ZAT6<---------ANAC58               ============ xxsmallRNA(si3)  ------>NtERF2--------->At4g35610        <---------ANAC58               ============ xxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ANAC55(1)            xxxxxxxxxxxx ------MYB52(2)--------->At4g35610--------->MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <--------- >TGA2(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------ICU4--------->DAG2        <------ZmHOX2a(1) ----HVH21  <---------ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(i) <---------ANAC46              xxxxxxxxxxxxx   caaacgctacccttacgagcggccttatgacgtagctgacagactaatactacaagaattacttgtgcaaaagttgctatgtttttaacgaggaagacaa  12700500  Previous    Next  AGI:  At4g24600.1    Description:  unknown protein Range:  from: 12699996    to: 12700488    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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