Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ZAT14               <---------ZAT14           --------->ANAC46        --------->ZAT18        <---------ZAT18        <---------ZAT14                                                     <----------ID1        --------->ZAT14                                                     ----------->GT1    <---------------AtSPL8                            --------->ANAC46     ------------------------>ANAC81    --------------->AtSPL8                         <---------ZAT18         ----------->GT1    ------- -------->GT1--------->ANAC46              <---------ANAC46              ---------->DOF2---------->DOF2   tggagaatagtacacactacacaaactattgtctatgactctatggtgtatagttcacatcagagacaaaaaaaaaaaaggaaaaaaaaaaaaagaaggt  12696100                                                                                          <---------MYB52(1)                                                                                  <---------O2                   --------->YAB1                                                 --------->O2              <-------GAMYB                                               <---------AHL20(1)             ------>ZmHOX2a(2)            <-----------GT1           ----------->GT1      ------------            <------ZmHOX2a(2)          ----------->GT1             ------->TEIL  ----------->STF1   <           --------->ARR11(3)--------->YAB1                     <---------ANAC46 ---------->ID1   <--  <----------ID1  <---------YAB1<-----------GT1        --------->DAG2     --------->AHL20(2) <------- ---->GT1  <---------ARR11(3)----------->GT1          ---------->DOF2     <---------AHL20(2) <-------   gaaaacaacaagagatcgttgtcataaaaaatagtaacaagttgttacttcttgcataaagttgtgatgtatgtaaaaaatttgacgtcttcgttgtgtt  12696200                         <---------At5g28300                       ----------->HVH21                      <-----------TGA1                      <-----------HVH21                --------->At4g35610    <-----------HVH21--------->TGA1a                                                         --------    <-----------TGA1 <---------O2                                                            <-------   --------->DEAR3(1)<---------TGA1a                --------->ARR14(2)                       <-------   --------->ANAC46  --------->O2   --------->ARR11(3)                                    --------->YAB1 <---------At5g28300 --------->ANAC46  <---------AHL20(2)                                <---------YAB1 --------->WRI1 --------->ZAT2      <---------ARR11(3)                                  --------->AHL20(2) -----------GT1 <---------ZAT2      --------->AHL20(1)                               --------->ARR11(3) ---------HVH21 <---------At4g35610 <---------AHL20(1)                      <---------ANAC55(2) --YAB1      <---------At5g28300  <---------KAN4(2) <---------ARR14(2)    --------->ZAT6<---------AHL20(2) --ANAC46 <-----------HVH21  --------->ALFIN1------->TEIL   --------->At4g35610      <---------ARR11(3)   tgtcaccgtcactgttacagctcccgtcaccgtgggaatattttatgtatgccaaatatgccatctgtattccataacacttatcgagattttaataagt  12696300                               <---------TOE1(3)                               <---------TOE2(3)                               <---------YAB1                            --------->ICU4                 --------->ANAC55(2)                  <---------At4g35610           <---------YAB1   <---------YAB1       <---------ANAC55(2)      <---------ANAC58    <---------ICU4     <-------GAMYB --------->GLK1(1)                      <--      <---------ANAC58   <---------YAB1     <---------MYB46(3)                                    --- ------->AtSPL8  <---------ANAC55(2) <---------YAB1   --------->At4g35610                      <----- --------AtSPL8  <---------ANAC55(1) <---------AHL20(2) <---------YAB1                     <---------HSFB2a(2) --ICU4<----------DOF2   --------->ICU4    <---------TOE2(3)                               --------->HSFB2a(2)   actcaattgctttctgattaagtgttgatgattatggtttttattgtggttaagtatgctgatttcaaaattttaaaaatcaagaatacatttctaaaaa  12696400                                  <---------YAB1                      --------->AHL20(2)                      <---------AHL20(2)                 ------------>CBF                  --------->AHL20(2)                    --------->ANAC58                 <---------AHL20(1)              ----------->TBP                 --------->ARR11(3)           <---------ARR11(3)              --------->AHL20(2) --------->AHL20(2)     --------->ANAC58             --------->YAB1      <---------AHL20(2)   ---------->DOF2             --------->AHL20(2) --------->YAB1--------->ARR11(3)                     --------->GLK1(2)        --------->AHL20(2)      --------->AHL20(2) ----------->TBP        --------->ATHB12 -------AHL20(2) --------->AHL20(1)         <---------TOE2(3)--------->ICU4<------------CBF ------>AHL20(2) <---------ARR11(3)     <----------DOF2--------->DAG2    <---------ATHB12       <---- ----ICU4 --------->YAB1     --------->WOX13(1)--------->CCA1(2)   ---------->ID1   <---------GLK1(2)   ttatatacaaaataataaaaatatttaaaatcaattaaaattctttaagatatatataaagcaatatttgtcccaaagattgaatagaatctaatttcag  12696500                        <-----------HVH21                       --------->ANAC46           <---------LBD16                     <---------ANAC58           *TSS                     <---------ANAC58<----------DOF2             ---------->ID1 --------->ANAC58 <----------DOF2         <---------ANAC58   <---------O2     <---------DAG2         <---------ANAC58   --------->O2---------->ID1 ----------->GT1             --------->RAP2.6(2)         <---------ANAC46   --------->ANAC58<---------DAG2   --------->AHL20(2) <------MYB46(1) <---- -----At4g35610   <---------SPL7     <---------DAG2 --------->LBD16             <------MYB83  <------   caaatttagttgcttgttgtcttacgagtcacgactctccttttcccctttttccggtggaaataaaacaaacaaatattgtaggtcgcaattgtggagg  12696600                                                                                       <---------ICU4                                                                                      --------->ICU4                                                                             <---------ANAC58 --------->MYB46(3)                                           <---------GLK1(1)       <---------YAB1 --ZmHOX2a(1)                                 <----------DOF2 --------->GLK1(1)     --------->YAB1 -- ---ANAC46<-------TEIL <----------DOF2 --------->TOE2(3)  --------->AtLEC2   <---------ANAC58      --   agaaccatcaaattcatcttcttctctttcacaaatttcagcctaaaactttccgattccatggaaatcgaagtctcttgctcgactcatgatgccgaaa  12696700                                                                                                    -                                                                   <---------WOX13(1)               <                                                                   --------->GLK1(1)               --                                                                  <---------ARR14(2)               <-                                                                  --------->ARR14(2)           <-----                                                                --------->LBD16                ------                                                              <---------LBD16                <<<<<<<ZML2                                                          --------->At4g35610                <-------                                        ---------->DOF2   --------->ZAT2                  <---------HSFC1(1)                                   --------->DAG2     <---------ARR14(2)                  --------->HSFB2a(2)                                  ---------->DOF2     <-----------ARR10                   <---------HSFB2a(2)                             <---------ANAC46         --------->GLK1(2)                   --------->HSFC1(1) -------->DOF2               <---------ANAC58         --------->ARR14(2)             <---------At4g35610 ------->MYB52(1)            <---------ANAC58        <---------GLK1(2)        --------->ARR11(3)   <-   ccaaaggaaaccgcatcgatttggatagtattcgtgtaaagcgaaagacgttacagaatctgctcgcggattgccagagagctcttgagcttctagaact  12696800                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                          --------->LBD16          --------->MYB52(1)                                                             <---------LBD16   <---------DEAR3(1)                                   <---------ARR14(2)               <---------HSFB2a(2)  <------NtERF2                                --------->ALFIN1                        ============== ------>NtERF2                                <------ZmHOX2a(1)          <---------HSFC1(2)  -------- --------->LBD16                            --------->ALFIN1     --------->ANAC58      <------ZmHOX2a(2) -------->LBD16          ----------->GT1   <------ZmHOX2a(1)     --------->ANAC58     <---------ARR14(2) ---------LBD16   <---------ANAC58       --------->ALFIN1   ----------->HVH21  --------->At4g35610 ------->HSFB2a(2)<---------ANAC58      <------ZmHOX2a(1)--------->GLK1(2)     <---------At4g35610 -- --------HSFB2a(2)<---------ANAC46      xxxxxxxxxxxxxxxx>smallRNA(se3) <---------ARR14(2)--------->HSFB2a(2) ----HSFB2a(1)   <------NtERF2      --------->LBD16    <---------HSFC1(2)--------->HSFC1(2) <------ZmHOX2a(1) --->HSFB2a(1)  ------>NtERF2     <---------LBD16      <---------HSFB2a(1)  <---------MYB52(1)<------ --ARR11(3)    --------->ALFIN1--------->MYB46(3)<------ZmHOX2a(1)     --------->ARR14(2)<-----------RAV1(2) --------LBD16 <---------DEAR3(1)--------->MYB52(1) <------ZmHOX2a(1)----------->ARR10--------->ARR14(2)   tcccggcgatgaaaacggtggcgaacagagtgaatcaccggaggaggaggaggaggaagaatcggacagggaagaaccgtctgcttccgatccaggagat  12696900         ---------->DOF2   <---------At4g35610   --------->At4g35610 -->ZmHOX2a(2) ------->RAV1(2) ---->GLK1(2) --ZmHOX2a(2)                                              ------>ZmHOX2a(2) --->ARR11(3)                                          <---------YAB1 ----ARR11(3)                                      --------->ARR11(3) --->ARR14(3)                                     ================HOX2a_HOX2a ----ARR14(2)                                     <------ZmHOX2a(1) --->ARR14(2)                                   <---------TOE1(2) ----ARR14(3)                <----------DOF2    <---------TOE2(2) -->GLK1(1)                  --------->TOE2(3)--------->TOE1(2) =====HOX2a_HOX2a     <---------AHL20(2)     <---------ANAC46                                       < --->ARR10--------->DAG2  <-----------GT1    <---------ANAC58                                     <-- ---->ZmHOX2a(1)      <---------YAB1         <---------ANAC58      --------->At4g35610            --- ---GLK1(1)       <----------DOF2         <---------MYB52(1)       <---------At4g35610 --------->At4g35610   cctgaagctgataaagtatgcttttttattactttaatctctctgtttcgtaggattttgatcgatgttagctcaacttagaatatagaagctcaatttc  12697000  Previous    Next  AGI:  At4g24590.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49710.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO61623.1) Range:  from: 12696548    to: 12698228    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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