Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->YAB1                   ----------->RAV1(1)   ------->TEIL --------->ANAC58 -------ANAC55(2)--------->LBD16                                                               <----- ->ATHB12       --------->ANAC46                                                               ------ >HAHB4         <---------ANAC55(2)                                                            ------ --ICU4         --------->ANAC55(2)                                                            ------ ->YAB1         --------->ANAC58                                                 --------->ALFIN1---- >ICU4         <---------LBD16                           <---------REM1(1)     <---------TGA1a ------ -YAB1     <---------ICU4      <---------ATHB12    --------->ANAC58       <------ZmHOX2a(2)    ------ -ATHB12  <---------YAB1     --------->MYB52(1)    --------->ANAC58      <---------ARR11(3)    ------   acatgaatgctcatcatcgcgcaacaatgaccaatggagaagacagaaaatgcaggtaattgtagccaaaaacgagatcagaagtgggattgtgaacaag  12693900                                                                                       --------->LBD16                                                                                      --------->ANAC46       ------>ZmHOX2a(1)                                                            <---------ALFIN1     ----------->RAV1(2)                               <---------ARR11(3)          --------->MYB46(3)   <-----------GT1                                    --------->CCA1(1)         ----------------->AGL1 ----ANAC55(2)                                        --------->RVE1(1)     --------->REM1(2) --->ANAC58                                       <---------AHL20(2)       --------->ALFIN1 --->ANAC46                                       --------->AHL20(2)     <---------ANAC46 --->ANAC55(1)                             --------->DAG2                <---------ANAC58 ----->AHL20(2)             --------->ANAC58--------->ANAC58           <---------At5g28300  --------- --->ANAC55(2)              --------->ANAC58--------->ANAC58          <-----------GT1<---------LBD16 ----->GT1    <---------ANAC58            ---------->DOF2       <---------TOE2(3) ------>NtERF2  ---- --->ANAC58   <---------ANAC58        <------ZmHOX2a(2)--------->ARR11(3)<---------ANAC58   ---------   taatttctcctgcttcgcgttccattacagaggcaattcgatcaaaaagcaaataaatatctcattaagaaattaccgtgttgccaccacgggaacgcga  12694000                       ================================HOX2a_HOX2a                       <------ZmHOX2a(1)                    <------ZmHOX2a(1)      --------->LBD16                    ===================================HOX2a_HOX2a                 <-----------RAV1(2)     ----------->RAV1(2)                --------->LBD16      ----------->HVH21              --------->ZAT14       <-----------HVH21                                    >>>>>>>>>TBF1              --------->ZAT18      --------->ALFIN1                                   >>>>>>>>>TBF1              <---------ZAT14    <---------At4g35610                                  <xxxxxxxxxxxxxx >ANAC58<---------HSFB2a(2)      --------->At4g35610                               >>>>>>>>>TBF1 ----->GLK1(2)<---------LBD16  <-----------RAV1(2)                        --------->ATHB12 >ANAC58--------->HSFB2a(2)   <---------ZAT14   <------ZmHOX2a(2)       ----------->RAV1(1)      ----   gtctgtgtttccagactgcgcaggaggaatactgcaggtgtcaccctgagatcagaacaaaaacaaacattgagcaacattggaagaagaagaagaacaa  12694100                                                                                             <-------                                                                                        --------->At4g35610                                                                                        <---------At4g35610                                                                                     --------->At4g35610                                                                                     <---------At4g35610                                                                                     <---------ZAT2                                                                                    <-----------RAV1(1)                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                            <-------MYC3                          <---------ZAT2                                           --------->TGA1a                        --------->ZAT2                         --------------->AGL15                                   <-----------RAV1(1)                         <---------------AGL15                                 <---------At4g35610                        ----------------->AGL3                                 --------->ATERF1(1)                        <-----------------AGL3                                 <------NtERF2 <-------                        ----------------->AG------->MYC3                      <---------ATERF1(1)                        ----------------->AGL1      <---------At4g35610       ------>NtERF2<-------GAMYB       --------->HSFB2a(2)                ------->TEIL                        --------->ABI4(2)       <---------HSFB2a(2)             --------->ANAC58                       --------->MYB55(2) <---    --------->ARR14(2)  ----------------->AGL2      ----------->RAV1(2)       <---------MYB46(3) <---    <---------ARR14(2)  <-----------------AGL2    <---------ARR14(2)         <---------DEAR3(1)  <--- xxsmallRNA(i)      ------->TEIL       --------->ANAC58         --------->ATHB12<---------RAP2.6(2) ----->MYB46(3)--------->At4g35610   --------->CCA1(2)------>ZmHOX2a(1)--------->WOX13(1) <----------   caatcgggtctggagcgagatgaatttccaaaaatagagagacgcacatgaggctcctgctcttgttcattggcaatcggtggctgctgctgctgttgtt  12694200                                                                             <---------SPL7                                                                            =========================                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------bZIP60(2)                                                                            <---------TGA1a                                                                            --------->TGA1a                                                                         --------->WRKY12                                                                         ----------->HVH21                                                                   --------->ANAC58       <---------ALFIN1                                            --------->ANAC58      <------NtERF2                                                --------->ANAC46      <---------ZAT14                                           <-------TEIL<---------ANAC58      <---------At4g35610                                      <-----------HVH21  <------NtERF2 --MYB46(3)       <------ZmHOX2a(1)                          <---------MYB46(3)--------->SPL7   ----- ----RAV1(1)      --------->ATERF1(1)                       <---------DEAR3(1)--------->ALFIN1 ------ ---MYB83 <-------MYC3         <---------YAB1              <---------LBD16  <---------O2      <------ ------MYB46(3) --------->ALFIN1        ==============================================bZIP_DOF<------ ---MYB46(1)   <------ZmHOX2a(1)        <----------DOF2<---------WRKY18(1) <---------------AtSPL3<--- -RAV1(1) ------->MYC3      --------->ICU4            ----------->HVH21<------------CBF      --------   ggtttggctgcacatgaggaggaggctgtgaagatgattctgcgtttttgttagccatgaccgcggttcacgccattgacgtgcggcactataaacccag  12694300                                                    <---------MYB59                                                  --------->ARR14(2)                                                  <-----------ARR10                                                  <---------ARR11(1)                                                  ------->TEIL     --------->DAG2                      --------->ANAC46        <---------At4g35610    ---------->DOF2                      --------->ANAC58        --------->At4g35610 ==============bZIP_DOF       <---------HSFB2a(2)<---------CCA1(2) ---->ANAC46        --------->YAB1       --------->ANAC58    ------>ZmHOX2a(2) --->LBD16  <---------HSFB2a(1)     ================================HOX2a_HOX2a ---LBD16   --------->HSFB2a(1)  <------ZmHOX2a(1)<---------ARR14(2)                                - -----RAV1(2)    <---------At4g35610<------ZmHOX2a(1) --------->MYB52(1)                       <----- ---ZmHOX2a(1)  <---------TOE1(1)===================================HOX2a_HOX2a          <---------HSFB2a(2) ->TOE1(2) <---------KAN4(2)  --------->HSFB2a(2)<---------ARR14(1)<------ZmHOX2a(2)     --------->HSFB2a(2)   gaaacaaaaagagaatgtccgatgatcaaattcgaggaggaaaacgcagtcgtatctaactgatctcagatcagagaagcatgaattcgatcgagaaaca  12694400                                                                                                   <-                                                                                               <-----                                                                                               <-----                                                                                               <-----                                             --------->AHL20(2)                               <------                                            --------->YAB1                                   <-------              --------->YAB1         --------->YAB1                                          <-------        --------->LBD16              --------->AHL20(2)                                   --------->GLK1(2)      ------>ZmHOX2a(2)           --------->WOX13(1)                                     <---------GLK1(2)    <---------AGP1        ---------->DOF2  --------->AHL20(2)                            --------->ARR11(3) -------->TOE2(3)----------->GT1------------>CBF                                         <---------ARR11(3) ----MYB52(2)<---------YAB1--------->DAG2--------->YAB1         <----------DOF2         <---------RVE1(1)   aaccttgatctgggaatgatagtaaaaaaaaagtatcaattaaaaataaaaatagcgaaaatggtgttttagggagagaaatggtgagagagattttggt  12694500                                                                                                =====                                                                                   ==================      <------------CBF                                                             <----------DOF2 <---------AtLEC2                                                           --------->HSFB2a(1) <---- --------YAB1                                    ----------->GT1          --------->ARR14(2)    <---- ----ANAC58                                      <----------ID1           <---------ARR14(2)    ----- ----ANAC58<---------WOX13(1)               <---------REM1(1)      ---------->DOF2<---------ANAC58 --GAMYB --------->ATHB12          <------ZmHOX2a(1)  --------->AHL20(2) <------ZmHOX2a(1) ---------- ---MYB46(3)         <---------WRKY12       ----------->HVH21      ================================== --TOE2(3)<------------CBF  <-----------HVH21---------->DOF2   <------NtERF2<---------HSFB2a(1)<----- --YAB1<---------WOX13(1)------->GAMYB      --------->ALFIN1  --------->RAP2.6(2) <---------ANAC58   tgtgaatggattgattgatgagttcaacggcgttagaggagaagaggtgaagcgaaaaaaatggccgaaaaaagaggaacctttgcttttattttggcag  12694600      --------->TGA2(2)     <-----------TGA1    --------->bZIP60(2)    --------->ANAC46    --------->ANAC58    --------->ANAC58    --------->ANAC55(1)    --------->ANAC55(2)    --------->TGA1a    <---------O2    --------->O2   <-----------STF1   <-----------bZIP911(2) <---------REM1(2) =============MYC_MYB                                                                --------->ATHB51 =============bZIP_DOF                                      ---------->ID1           <---------ICU4 ---GAMYB   --------->At4g35610         <-----------GT1   --------->WRKY12          <---------MYB52(1) -----At4g35610                 ----------->GT1           --------->WRKY38(1)       <---------YAB1 ---->At4g35610          <---------ANAC58                 ----------->HVH21         --------->ICU4 ------------->TaNAC69(2)<---------ANAC46               <----------DOF2          --------->MYB46(3) =============bZIP_DOF   <---------ANAC58     <----------DOF2                    <---------ATHB12  <- ----MYB46(3)      <---------ALFIN1    <-----------GT1  --------------------->WRI1--------->YAB1  ---   ttgtacacgtcatcatcttccccccttccttggagggaaattttccctctttctccccctttgacctcttccctcttctctcaaccattatttctcttat  12694700                      --------->YAB1                      <---------ICU4             --------->ZAT6           <-----------GT1     --------->AHL20(2)     <---------AHL20(2)  <-----------GT1 --------MYB59       <---------YAB1 ------>ANAC46     --------->YAB1              <---------TOE2(3)                          ---------->DOF2   accgaatttatattaacactcttataattactctctactctatagttttatggattatatgctacttaatatgtcttagagtcttggcaaaataaagttt  12694800  Previous    Next  AGI:  At4g24580.1    Description:  pleckstrin homology (PH) domain-containing protein-related / RhoGAP domain-containing protein. similar to pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19390.2); similar to pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19390.1); similar to pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19390.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO61622.1); contains InterPro domain RhoGAP; (InterPro:IPR000198); contains In Range:  from: 12687889    to: 12694258    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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