Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------MYB52(2)          <-----------HVH21                       <------ZmHOX2a(2)   <<<<<<<<<<WRKY26                    --------->LBD16        <---------ZAT14   <<<<<<<<<<WRKY43              --------->ARR11(3)    ---------->DOF2           <---------ZAT2   <<<<<<<<<<WRKY38              --------->ARR14(2)   --------->LBD16            --------->At4g35610 <------MYB46(1)                <---------CCA1(2)<---------ARR14(2)   --------->TOE2(2)   ------>ZmHOX2a(1) <------MYB83                  ------->TEIL      --------->ARR14(2)   --------->TOE2(3)  --------->TOE2(3) -------ANAC58           <-------TEIL<---------LBD16 --------->LBD16-------->P   <---------At4g35610 -------ANAC58--------->At4g35610<---------ARR11(3) <---------HSFB2a(2)      <-----------HVH21 ----->ATHB12 <---------At4g35610<---------ARR14(2) --------->HSFB2a(2)  --------->MYB52(2) ---------   gcttggtcatcttgtcagccctctaggctcatgtatatctcccgattgctcgatcccgaaagtcttcactaaccttcgttgtcagcttaatcctcaaagt  12675500                             --------------->AGL15                           ------->TEIL                       <---------------AtSPL8                       --------------->AtSPL8                     <-----------RAV1(1)                   <---------ANAC55(2)                   <---------ANAC55(1)                   <---------ANAC46                   --------->ANAC55(2)             --------->AHL20(1)                                                                     <             --------->AHL20(2)                                                                    <-             <---------AHL20(1)                                                                  ----             <---------AHL20(2)                                                            <------ZmHOX2a(2)            <---------AHL20(2)                            --------->TOE1(1)            --------->LBD16            --------->AHL20(2) <----------DOF2      <---------ANAC58                   --------->HSFB2a(2)      --------->HSFB2a(2) <-----------GT1           <---------ANAC58                ------>ZmHOX2a(1)      <---------HSFB2a(2)<---------SPL7 --------->At4g35610                         ==============HOX2a_HOX2a ->DOF2   --------->YAB1<---------REM1(1) ------->GAMYB  ------>ZmHOX2a(1)    <-----------GT1   -----   tttgacttccaaaaataaattatgtgttgtaccctttatatcaactcacattttgcttcctcgtaaacaatgtttttttttttctcctccgagatcgaac  12675600      <---------------AtSPL8      --------------->AtSPL8    --------->YAB1                                                                                  - --------HAHB4             ------>ZmHOX2a(1)                                                       <- --------YAB1             --------->TOE2(3)                                                   ------- ----->YAB1               --------->TOE1(3)       >>>>>>>>>CBP60g                             ------- ---->MYB46(3)      <---------ICU4--------->YAB1  >>>>>>>>>SARD1                         <----------ID1   catcatttatagtacttactacttatttccttaaactcataacaagttcgaaatttgggccatattgatgtcttaaaaataggcccatataagaacaaga  12675700                                                                                         --------->MYB46(3)                                                                                       ----------->RAV1(1)                                                                                      --------->AtMYB61                                                                                      <---------ALFIN1                                                                                     --------->MYB46(3)                                                          <------NtERF2          --------->AtMYB61                                                          --------->At5g28300    <---------ALFIN1                                                         ------>NtERF2          --------->ANAC46   <---------ICU4                                      --------->RAP2.6(3)    --------->AtMYB61  --------->ICU4                                   <---------DOF5.7(2)        <---------ALFIN1 ------  <---------YAB1            <-----------HVH21      --------->MYB52(1)        --------->MYB46(3)------ -------->YAB1        --------->HSFC1(2)         --------->DOF5.7(2)     --------->DOF5.7(2)   ------ --------ATHB12       --------->HSFB2a(1)      --------->ANAC46        <---------ANAC55(2)--------->ANAC46 -->ANAC58            <---------HSFB2a(1)<---------HSFC1(2)           <-----------------------TaNAC69(2) -->ANAC58       --------->ANAC46        --------->HSFC1(2)     ----------->GT1 --------->bZIP60(2) -   aatcataattcacaaaaacacagaaccctccgtctcatgaagaagcttcacgataacgacggcaaatggtaaaacgtgaaccacctcaccaccagacaca  12675800                                                                                       ==============                                                                                       ------>ZmHOX2a(2)                          <---------ZAT14                                             --------->GLK1(1)                          <---------ZAT18                                             <---------GLK1(1)                          --------->ZAT14                                            --------->ARR11(3)               <---------DEAR3(1)                                         <------ZmHOX2a(1)              --------->SPL7<---------ZAT6    ----------->HVH21           ====================HOX2a_HOX2a       ----------->HVH21--------->At4g35610  --------->At5g28300        <---------TOE2(3)  <----------ID1     <------ZmHOX2a(2)    <---------LBD16               --------->ANAC46 --->ANAC58   <------ZmHOX2a(2)      ------>MYB83            --------->MYB46(3)      <---------ARR11(3) --->ANAC58  --------->ARR14(2)      ------>MYB46(1)        *TSS    <----------DOF2<---------YAB1 --->ANAC46  <---------ARR14(2)    <---------MYB59         --------->ARR14(2)    --------->YAB1 --------->DOF2------>ZmHOX2a(2)<-----------GT1            <---------ARR14(2)   --------->ICU4   caaaaagacgagaccgatcggcgatcagtagacttaaccaaactcgcggtgaaacagtcggaatccaccgctataaggaacgatgatgatctcccaattc  12675900                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                             <------------------------ANAC81                                                           ------>ZmHOX2a(2)                                            --------->At4g35610 =======================HOX2a_HOX2a                                            <---------At4g35610 ------>ZmHOX2a(2)                                   ----------->HVH21       ==============HOX2a_HOX2a                                 <---------ANAC58          ============================HOX2a_HOX2a                                 <---------ANAC55(1)     --------->ARR14(2)             <---------DAG2                                 <---------ANAC46        <---------AGP1<---------At4g35610                                 <---------ANAC58        <---------ARR14(2)             <----------DOF2                <------ZmHOX2a(1)--------->ANAC55(2)  <---------HSFB2a(2)              <---------ANAC58    <---------CCA1(2)            <---------ANAC55(2)  --------->HSFB2a(2)       ------>ZmHOX2a(1) ======================HOX2a_HOX2a--------->LBD16 <----------DOF2 ------>ZmHOX2a(1)    <---------ANAC58   ttcgtcttatctcagcgaggagataacatcgtcttccgtgactgtaagctctctttctcgatctgatcctctctgcttcttcctgttttgctttttctct  12676000                                            --------->ARR11(3)                                            <---------ARR11(3)                  ------>MYB83                                  <-----------GT1                               ------>MYB46(1)                                <---------HSFB2a(1)              ------>ZmHOX2a(2)    <---------ANAC58                                --------->HSFC1(2)          <---------WOX13(1) ----------->RAV1(1)                <-----------GT1<---------KAN4(2)  <---------HSFB2a(2)        --------->MYB46(3)------             --------->bZIP60(1)<---------HSFC1(2)--------->HSFB2a(2)       -------->P<---------ANAC58             <---------bZIP60(1)--------->HSFB2a(1)    <---------At4g35610------>ZmHOX2a(2)  --------   tcagagtcgagtcttatgtcactgtttcatgagaattttccattgaaatcttctctaagctcattgatctgtttgatctaccaacatttcttatccgatg  12676100           <---------At4g35610                                                 ------->TEIL           --------->At4g35610                                           --------->GLK1(2)     <---------YAB1                                                  <------NtERF2 ----->HVH21                   ----------->GT1         --------->WOX13(1)--------->ARR14(2) ->At4g35610        ----------------->AG              <---------AHL20(2) <---------ARR14(2)     -----   acaaattatgttgagctgaatttccaaatcagattgtacaaatatagcaaaactattcaattagtttgggcagagtatctgtatgtaatgtagtagaaga  12676200                                  ------>ZmHOX2a(2)                                <---------ARR14(2)                                --------->ARR14(2)                              <------MYB83                                                  ---------                            <--------P                                                      ---------                           <-------GAMYB                                                 --------->ANAC58                          <------MYB46(1)                                                --------->ANAC58                          <---------MYB46(3)                                          <---------SPL7                          <------MYB83                                              <---------TOE2(3)                         <---------AtMYB61                     <---------AHL20(2)<----------CDC5                  <-----------GT1<------ZmHOX2a(2)       <-----------GT1        <---------ZAT2 ----->DOF2 <---------TOE2(3) <------MYB46(1)      <---------ARR11(3)           --------->ZAT2   <---   aagctatttgttttgagattatacgatttggttggatccaatacaagtttcaagatgtgtaacgttttattgctacagaccgggctgaggtacccaaagg  12676300                                                               <---------CCA1(2)                                                              <---------MYB111(2)                                                            ------>NtERF2                                                           --------->DEAR3(1)                                                           <---------ALFIN1                                                          --------->ORA47(2)                               --------->HSFC1(1)         --------->DEAR4(2)                               <---------HSFC1(1)         --------->RAP2.3(1)                               <---------HSFB2a(2)        --------->ATERF1(1)                               --------->HSFB2a(2)        <------NtERF2                              <---------LBD16            ------>NtERF2                              <                            --------->ARR14(2)           <---------ATERF1(1)                        -                            <---------ARR14(2)          --------->ANAC58                            <                    --------->DAG2                      --------->PCF2                       <-------                  <---------MYB52(1)                    --------->RAP2.3(2)                  <-------GAMYB                 --------->LBD16                        --------->ANAC46 <------MYB46(1)     <-------                <---------ANAC46                        --------->ANAC58<---------TOE1(2)   <------MYB83                <---------ANAC58                       --------->RAP2.3(1)                  <-------- --------->ZAT14<---------ANAC55(2)                    --------->ATERF1(1)                 --------->MYB59 <---------ZAT14--------->ANAC55(2)              --------->ZAT14   <----------DOF2 <----------DOF2--- <-------TEIL   <---------ANAC58                 <---------ZAT14------>MYB83  --------->YAB1<------MYB46(1) >MYB52(1)      --------->HSFB2a(2)             --------->AtLEC2------>MYB46(1) <-----------GT1<----- ->DOF2         <---------HSFB2a(2)     <------ZmHOX2a(1)<---------RAP2.3(1) <---------YAB1<---------AtMYB61 ------------AtSPL8---------->DOF2   <------ZmHOX2a(1)<---------ATERF1(1)<------MYB83    <---------MYB52(1)   aagtacagagacattcttccgtaaagtcaagttctggaaggaggatggcaatgcagaggcgccacctatctttgtaggtattatactttctgtttggttg  12676400  Previous    Next  AGI:  At4g24550.1    Description:  clathrin adaptor complexes medium subunit family protein. similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT5G46630.1); similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT5G46630.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61106.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, sigma subunit/coatomer, zeta subunit; (InterPro:IPR000804); contains InterPro domain Clathrin adaptor, mu subunit, C-terminal; (InterPro:IPR008968); contains InterPro domain Clathrin adaptor, mu sub Range:  from: 12675860    to: 12679074    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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