Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ----------->GT1      --------->At4g35610                           <---------------AGL15   --------->ATHB12                                 -               <---------At4g35610             <---------AHL20(2)             <---------ANAC46     <-               --------->At4g35610             --------->AHL20(2)           --------->MYB52(1)     <-   --------->TOE2(3)      ----------------->AG--------->AHL20(2)           ----------->TGA1     -----   --------->YAB1         ----------------->AGL1  <---------ATHB12         ----------->HVH21 <------ZmHOX2a(1)   gccaaacttaattcttcagcttcacaatcccaaaatgtgaaattccaaataaatcatcggagatagagagagagagactgacggagaagagagaaggaga  12669600                                  <---------ARR14(2)                                  --------->GLK1(2)                                  --------->ARR14(2)                       <-------TEIL                      --------->CCA1(2)                      --------->GLK1(2)   ------>NtERF2      --------->ARR14(1)          --------->ANAC58        <---------At4g35610 <------NtERF2       --------->ARR14(2)           --------->ANAC46        --------->At4g35610 ----------->HVH21   <---------GLK1(2)--------->LBD16              --------->At4g35610 ----->NtERF2        --------->ARR11(1)   --------->DAG2        ---------->DOF2            --------->GLK1(2) --------ANAC58      <---------ARR14(2)  ---------->DOF2     --------->ZAT2             <---------TOE1(3) --------ANAC58    ----------->ARR10<---------LBD16          --------->At4g35610   --------->ATHB12 ---->ALFIN1--------->At4g35610  <---------GLK1(2)--------->ANAC58 <---------At4g35610  <---------TOE2(3)   ggcgcgaccaagagggctgaagagattcggatagagaatcgggaaaaggagcacgaaaacaccagctaaagctgtcttctgcgactgattaaggttctgt  12669700                                               <---------TOE2(1)                                               <---------TOE1(1)                                              <---------TOE2(2)                                              --------->SPL7                 <---------HSFB2a(1)          <---------TOE1(2)                            ----------        --------->ATHB12                    <---------SPL7                         --------->MYB52(1)      <----------DOF2                       --------->TOE1(2)                     <---------SPL7     <-----------------AGL3                <---------ANAC58                   --------->DEAR3(1)   --    <---------At4g35610                    <---------ANAC58    <---------MYB52(1)<---------MYB52(2)--    --------->At4g35610                   --------------->AtSPL3             --------->At4g35610 <---  <---------RAP2.6(2)                     <---------------AtSPL8             <---------At4g35610 ----   aatggctgcttcatttggagcattcgattttcaacaaaaacagagtcgtacgatgaagacaatcccttattctaaactcagcgacgaacgaataaaagac  12669800                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                 ----                                                                                                -----                                       --------->ARR14(2)                                       <----                                ------->MYC3                                                   <-----                                <-------MYC2                                                   ------                                ------->MYC2                                                   ------                                <-------MYC3                                                   <-----                               --------->ANAC58                                                >>>>>>  <----------DOF2           <---------ZAT2 --------->LBD16                                     >>>>>> >DOF2   --------------->AtSPL8--------->ANAC58         --------->ARR14(2)                     ------ ---->MYB83        =============================HOX2a_HOX2a                                    >>>>>> ---->MYB46(1)     ------>ZmHOX2a(1)   <---------ARR14(2)                                     ------- ------MYB59 ------->TEIL--------->LBD16 ------>ZmHOX2a(2)                           ----------->GT1- ----->AtMYB61    ----------------------->TaNAC69(2)    <---------ARR14(2)      ---------->DOF2>>>>>>   caaactttctcggtgtacctcctcatcccgagcacgtttctgatccgaaagtttgccaaatccaatttgttgaaattggatggaaagtggtaacagagat  12669900                                                                      <---------At4g35610                                                                   --------->TGA2(2)                                                                  <<<<<<<<<<<AtbZIP1                                                                  <-----------TGA1                                                                  <-----------HVH21                                                                 --------->bZIP60(1)                                                                 --------->O2                                                                 <---------bZIP60(1)                                                                 --------->bZIP60(2)       --------->MYB52(1)                                        <---------O2      --------->MYB46(3)                         ----------->RAV1(2) --------->ANAC58 -------->ANAC46                              --------->HSFB2a(1)--------->TGA1a -------->ANAC58                              <---------HSFB2a(1)<---------bZIP60(2) --------LBD16                               --------->ARR14(2)  <---------TGA2(1) -->ZmHOX2a(2)                               ---------->TaMYB80  --------->TGA2(1) ---->CCA1(2)                                --------->GLK1(2)   <---------TGA1a --ZmHOX2a(2)            <-------GAMYB       <---------ARR14(2)  <---------ANAC55(2) ----ARR11(3)            ==================================================MYC_MYB --->ARR14(2)            <---------At4g35610<---------GLK1(1)    <---------ANAC46 --->ARR11(3)        ----------->RAV1(1)--------->ALFIN1         <---------ANAC58 ----ARR14(2)        ------------>AtMYB77   <---------GLK1(2)    ==================================bZIP_DOF >>>GATA-1           ------>NtERF2   --------->LBD16             <---------ANAC58 >>>GATA-2          --------->ETT(2)--------->HSFB2a(2)         <-----------STF1 --->AGP1--------->MYB46(3)         <---------ANAC58            ----------->STF1 >>>GATA-3   --------->CCA1(2)      <---------ANAC46          ----------->TGA1 -->GLK1(1) --------->ARR14(2)      <---------HSFB2a(2)       ----------->HVH21 -------->ANAC58 --------->ANAC46   <---------ANAC58         <-----------HVH21 >>>GATA-4  <---------ARR14(2)     <---------LBD16 ------>ZmHOX2a(1) --------->ANAC58   <----------DOF2   ctacggaaacaaccgatacacgacgacagttgatacttccgggtgggaatctcctgagagagatgtgacgtcagcaattccaaataatctctttttttcg  12670000                          --------->AHL20(2)                          <---------AHL20(2)                         <---------AHL20(1)                         --------->AHL20(2)                       <---------TOE1(2)               ---                         <---------AHL20(2)                       <---------TOE2(2)          <-------                         --------->AHL20(1)  ----------->GT1  <------ZmHOX2a(2)           <---------ARR14(2)                       *TSS          <-------TEIL     <-----------HVH21                   --------->ARR14(2)                     <---------AHL20(2)  --------->ARR11(3)   ==================================HOX2a_HOX2a                    <---------AHL20(2)   <---------ARR14(2)  --------->ARR11(3)          <------ZmHOX2a(1)                    --------->AHL20(2)  <---------CCA1(2)    <---------ARR11(3)     <---------REM1(1)   caaaaacaaatattgggaagaataaaatttattttcagattcaaatcttgtaatatggtcacagatcataggttctaatttctcaaatgtaggattcacc  12670100                                                                                                 ----                                                                                                 ----                                                                                 <---------ARR14(2)                                                      <---------TOE2(2)          --------->ARR14(2)          ------>NtERF2                             <---------SPL7--------->At5g28300        <-------      --------->ANAC46                             <---------MYB46(3)            <---------ARR11(3)      --------->ANAC58                         <---------AtMYB61  --------->DOF5.7(2)  <---------YAB1      --------->ANAC58                       --------->YAB1      ----------->GT1 --------->ARR11(3) < ------>LBD16                               --------->ICU4<-------TEIL         ----------->GT1------- ----GT1 --------->DEAR3(1)           ---------->DOF2 <---------TOE1(2)     --------->ALFIN1 <-------   cgtgaatcacgcctcccatttcatatgtataacttcgactcaaagaatgatggtcgtaggctcgtagcggtaactagagaggggatattagaattgtttg  12670200                                                                 <---------ANAC58                                                                 <---------ANAC46                                                                 <---------ANAC58                                                              ------>ZmHOX2a(1)                                                            ----------->RAV1(2)                                                          ===================================HOX2a_HOX2a         --------->ANAC58                                 ------>ZmHOX2a(2)        --------->SPL7                                    ================================HOX2a_HOX2a      ----------->HVH21                                  <---------GLK1(1)      <---------SPL7                                     <------ZmHOX2a(2)               ----------->GT1     --------->TOE2(1)                                   --------->GLK1(1)             --------->ALFIN1     --------->TOE1(1)                                   ====================================HOX2a_HOX2a  --------->TGA1a                                        =================================HOX2a_HOX2a  --------->O2        <---------ARR11(3)                --------->ARR14(3)          --------->ALFIN1 ----->PCF2 <---------ARR14(2)                          --------->ARR14(2)         <------ZmHOX2a(1) ------>ID1 --------->ARR14(2)                          <---------ARR14(3)      <-----------RAV1(2) --ANAC58--------->ANAC46                               --------->ARR11(3)      <---------LBD16 ---------ALFIN1      --------->ARR11(3)                <---------ARR11(3)<---------TOE2(3) -------->AtSPL8      <---------GLK1(2)                 <---------ARR14(2)<---------TOE1(3) --ANAC58--------->ANAC58           <---------YAB1  ---------->DOF2    <<<<<<<<<MYB98 <------ZmHOX2a(1)   tcccacatcggacggaacttggaagatttttgtgaattagtatagaatgtgttagaaagatctcctgtcttgggttagggtttcaggaggagggagaatc  12670300                                                                                           <---------YAB1                                                                                     ------->TEIL                                                                                     <-------TEIL                       --------->TOE2(3)                                          --------->ANAC58                --------->YAB1                                                    --------->ANAC55(2)          --------->ANAC55(2)                                                     <---------ANAC55(2)          --------->ANAC46                                                       --------------->AtSPL3          --------->ANAC58                               <---------ARR11(3)  <---------ETT(2)          --------->ANAC55(1)<---------AHL20(2)          <-----------ARR10   <---------ZAT18          --------->ANAC58  --------->AHL20(2)           --------->GLK1(2)  --------->ALFIN1         <---------LBD16   <---------YAB1       <----------DOF2        --------->MYB52(1)  ------->TEIL <---------GLK1(2)    ----------->GT1         <---------DAG2      --------->AtLEC2--------->ANAC58   acacattcttacacggaatcaaaaacgttattaaaaagtttggactcactctttctcaaaatctaaccatgaaaaccggtggacacgtacatgaatattg  12670400                                                  --------->ATHB12                                                  <---------AHL20(2)                                                 --------->AHL20(1)                                           --------->TOE2(3)                                     <---                                     --------->HSFB2a(2)                                         ----                                     <---------HSFB2a(2)                    ---------->DOF2      <---                                <----------DOF2  <---------AHL20(1)    ---------->DOF2           ----        <---------AHL20(2)     <---------DAG2    <---------AHL20(2)<---------ZAT18      --------->DAG2       --------->AHL20(2)    --------->GLK1(2)   --------->AHL20(2)--------->ZAT18     ---------->DOF2   tttgagttataaaattctaacttcacttgagaaccttttctaaaaacttaatttattgaaattttgtagtgcataaagaaaagtttgggaaaagctaagt  12670500  Previous    Next  AGI:  At4g24530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61608.1); similar to expressed protein [Prunus persica] (GB:ABJ96379.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78778.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 12667368    to: 12670023    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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