Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------At4g35610                          <---------ARR11(3)     <---------ICU4       <----------DOF2           <---------YAB1 --------->ARR11(3)    <---------YAB1       <---------ANAC58               -          --------->AHL20(2)                  --------->YAB1         <---------ANAC58              <-      ----------->GT1  <-----------GT1  --------->YAB1         --------->GLK1(2)<-----------TGA1  --- ------>ANAC58   <---------TOE1(3)      <---------ICU4         <---------ARR14(2)   --------->At4g35610 ------>ANAC58   <---------TOE2(3)     <---------ATHB12   --------->YAB1        <-----------HVH21 <--   aagccaaattgttaaaattaaggtttaacatctctagttgaatcattctcatcatcgctatcgcaattctggctttgctcatcgtcagaagacggagacg  12611700            <---------ANAC58            <---------ANAC58            <---------ANAC46           <------NtERF2          <---------ATERF1(1)         <---------DEAR3(1)                      <-----------ARR10        --------->ZAT2                           <---------ARR11(3) ----->ZmHOX2a(2)                         --------->ANAC46 -----ZmHOX2a(2)                 --------->At4g35610 ------>ARR14(2)                 <---------At4g35610                                          >>>>>>> -------ARR14(2)              <------ZmHOX2a(2)<---------At4g35610                       ------>ZmHOX2a(1)   gatcgagacgggctgcgtctatagcccattggatcagcttatccacttcagcatcttctccgatttcatcaccatcttctccgatttcatcctgaagaag  12611800                                                              ------>ZmHOX2a(2)                                                              =================================HOX2a_HOX2a                                                             <------ZmHOX2a(2)                                                            --------->ARR11(3)                                                            --------->ARR14(3)                                                            --------->AGP1                                                      --------->YAB1                                               ------->TEIL <---------ARR14(3)                                               <-----------ARR10                                               --------->ARR14(2)                                               <---------ARR14(2)                                               <---------ARR11(1)                    <---------ANAC46           --------->GLK1(2)                                <----                    --------->ALFIN1          <---------CCA1(2)                         ------>ZmHOX2a(1)                   <------NtERF2              <---------ARR14(1)  <-----------RAV1(1)   <----------DOF2                  --------->LBD16          --------->LBD16  --------->ARR14(2)   <---------ALFIN1                 --------->ALFIN1          ------>NtERF2    <---------ARR11(3)   --------->AtMYB61<--                <---------LBD16           --------->RAP2.6(2)==================================HOX2a_HOX2a    <------ZmHOX2a(1)                  --------->ARR14(2)   <---------ARR14(2)   ------->GAMYB ------ >>TBF1   <--------------OsCBT         <---------ARR14(2) ----------->ARR10     --------->MYB46(3)---   aacagaggacgaagaagacgcggaggggagagaagttttcagagccgcgaatctaagcatgagatcttctggtgtttcttcaaccacatcctttgatttc  12611900                                                                                      <---------AGP1                                                                                      <---------ARR11(3)                                                                                      <---------ARR14(2)                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                 --------->CCA1(2)                                                                                <---------ARR11(3)                                       ------>ZmHOX2a(1)                        --------->ARR14(2)                                     ------>ZmHOX2a(2)                          --------->ARR11(3)                               --------->At4g35610                              --------->ARR14(3)             <-------GAMYB   <---------RAP2.6(2)                                --------->GLK1(2)            <---------MYB46(3) <---------At4g35610                              --------->AGP1          ------>NtERF2     <---------At4g35610                                 <---------AGP1 <------NtERF2          <-----------RAV1(1)                                     <---------ARR14(2) -----RAP2.6(2)         <---------MYB46(3)        <---------TOE2(3)             <---------ARR14(3) -------At4g35610     <-------GAMYB<---------ARR14(2)                         ----------->ARR10 --->RAP2.6(3)<---------MYB52(1)   --------->ARR14(2)--------->CCA1(2)   <---------ZAT6 ------>ZmHOX2a(2) ------>At4g35610    <-----------RAV1(1)     <----------DOF2      --------->GLK1(1)   --------->ARR14(2)   ggctgcattctcggccgttgtttctgttgttgctgctgatccttcttcttttgagatttgagagcgagaaatctagagtgaagatctggatctaagtaat  12612000                      --------->GLK1(2)                          --------->ANAC46               --------->ALFIN1                                  --------->ANAC58         --------->HSFB2a(2)                                     --------->ANAC58         <---------HSFB2a(2)                                <---------ANAC58                        =       <------ZmHOX2a(2)                                    <---------ANAC46                        -      <---------ARR11(3)           <----------DOF2          <---------ANAC58                       <-      --------->ARR14(2)    ------->GAMYB               <---------At4g35610                <---------ANAC58      <---------ARR14(2) ----------->RAV1(1)            --------->At4g35610                <---------ANAC58      --------->ARR11(3) --------->MYB52(1)             <---------ZAT2             ---------->ID1----   cggaagaagatcgagaagtgtgagaatcaacagagagctttagtatcatctcatcttgagctgcttgaagcaactgttcaacttcgtcttcttccttgcc  12612100                        <---------ARR11(3)                <---------ARR14(2)                ------->TEIL                <---------ARR11(1)                --------->GLK1(2)                --------->ARR14(2)        <---------CCA1(2) ------>ZmHOX2a(2)                      <---------ARR11(3)     ------>ZmHOX2a(1)  --------->ARR11(3)                       --------->ARR11(3)     ============================HOX2a_HOX2a                   <---------YAB1 ================================HOX2a_HOX2a               <----------DOF2 ----->ZmHOX2a(1)  <-----------RAV1(1)                     <---------DAG2                <---------ZAT14 --------ALFIN1<---------CCA1(2)                       <---------RAP2.6(2)--------->ANAC46 -->NtERF2  --------->HSFB2a(2)          *TSS      <------------CBF------>ZmHOX2a(2)  <---------ANAC46   tcctctcctcatctctcgaatctgttgatctcaaaatcgattttcaaaaaccgaattgcgactttatgatctctatacaaaaccggtttagtatagggtc  12612200                                                                             ----------->GT1              --------->ANAC58                                              --------->ARR11(3)              --------->ANAC58                                              <---------ARR11(3)             ------>MYB83                                                  <---------At4g35610             ------>MYB46(1)                                            <---------MYB52(1)            --------->MYB52(1)                                         --------->LBD16           >>>>           --------->AtMYB61                                           <-----------HVH21         <<<<          --------->MYB46(3)                     ------->MYC3         <---------ANAC58          <----          --------->DEAR3(2)                     <-------MYC3         <---------ANAC46          -----    <------------CBF     <---------ANAC46       --------->O2          <---------ANAC55(1)      ------   --------->ATHB12      <---------ANAC58       --------->ANAC46      <---------ANAC58      <--------  <---------YAB1 <---------MYB46(2)    <---------ANAC58               --------->ANAC55(2)------>ZmHOX2a(2)  <---------AHL20(2)     <---------ANAC58       <---------O2         <---------LBD16   --------->ARR11(3) --------->AHL20(2)    --------->MYB52(1)     <---------ALFIN1   <<<<<<<<<SARD1        <---------ARR11(3) <---------AHL20(2) >>>>>>>>>MYB98     <---------ANAC58          <<<<<<<<<CBP60g <---------AHL20(2)   gattttaattggaccaacgcctaacttacgggcacacgatgtcgtttcccacgcggtttagattccaaatttccgtgagatgtttatttgatctccaccg  12612300                                     >>>>>>>>>>WRKY62                                     >>>>>>>>>>WRKY40             ----------------->AGL1                                     <---------WRKY18(1) <---------ATHB12                                     >>>>>>>>>>WRKY18   ------>MYB83                                    --------->WRKY12    ------>MYB46(1)                                 ------>ZmHOX2a(2)   --------->MYB46(3)                               <---------ARR11(3)    <---------MYB55(2)                               --------->ARR11(3)    <---------ATHB12                           <-------GAMYB            ------>MYB83 ---------->ID1 >>>>>>>>>>>>>LFY    <-------GAMYB<----------DOF2   ------>MYB46(1) <<<<<<<<<<<<<LFY   <---------ANAC58--------->WRKY45--------->ANAC58 -------HVH21       <---------ANAC58--------->WRKY38(1)--------->WOX13(1)   ---------->DOF2        -- ---->ORA47(1) <---------ICU4--------->WRKY12       -------->P --------->MYB59                   <--- --->DEAR3(1) <---------YAB1<---------MYB52(1)      --------->ANAC58    --------->YAB1   --------->TOE1(3) -ALFIN1   <---------YAB1 <---------ANAC46  <---------ICU4   <---------MYB52(1)          --------->TOE2(3)   tccaatggaaactctgattatttcgttgccgttgatctttgaccaaaaattgccaaccaatcagtttggcccaataagaaaaggaagaaaacctgaattt  12612400                                                                            --------->HSFB2a(2)                                                                            ------>ZmHOX2a(1)                                 <-------MYC2                               <---------HSFB2a(2)               <----------DOF2   <-------MYC3                               --------->LBD16               <---------DAG2    ------->MYC3                              <---------LBD16               ===========================bZIP_DOF                         <---------ANAC46              <---------------AGL15                                   <---------MYB46(3)            -             <-----------------AGL3                                   --------->HSFC1(2)          <--             ----------------->AGL2     --------->AHL20(2)            <---------HSFB2a(1)   ---------             <-----------------AG------->MYC2                         <---------HSFC1(2)   <---------ARR14(2)       --------->MYB52(1)       --------->TGA1a     <------ZmHOX2a(2) --------->HSFB2a(1)  --------->ARR14(2) ------->ANAC55(2)         <-----------GT1 --------->AHL20(2)  --------->MYB46(3)        ----------->ARR10 --------GT1 <-----------------AGL1  ----------->GT1===============================HOX2a_HOX2a    ---   cacttaatctatcggcccttttttggtatttcccatgtgcgataaatttatacgatcaaatgtgaaccacgatggttcctggaagaaggaagagatttgc  12612500                                                                                           --------->ANAC58                                                                                           --------->ANAC58               ---------->DOF2                                                           <------ZmHOX2a(1)            <---------YAB1                                                           <---------ANAC46        <-------GAMYB                                                                <---------ANAC58       ----------->GT1                                                               <---------ANAC58   ------->GAMYB                                                                --------->ATHB12 ---------->RAV1(1)    --------->ANAC58                                       ==================HOX2a_HOX2a -------At4g35610      --------->ANAC58      *TSS                             <------ZmHOX2a(2) >CCA1(2)   ----------->TBP           --------->MYB52(1)                     <---------ARR11(3) ------>At4g35610--------->DAG2       ----------->RAV1(1)                    --------->ARR11(3) <----   agcaacagagcgttataaaaaggcgaagcaagagggaagacaacagataacaaattgtgaagaatgggaagcgaaggaagatcgattgcgaggaagccaa  12612600  Previous    Next  AGI:  At4g24370.1    Description:  unknown protein Range:  from: 12611406    to: 12612141    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24380.1    Description:  hydrolase, acting on ester bonds. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65400.1); similar to unknown [Populus trichocarpa] (GB:ABK94545.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61643.1); contains InterPro domain Protein of unknown function DUF341 (InterPro:IPR005645) Range:  from: 12612545    to: 12613729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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