Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                  ------>ZmHOX2a(2)                                                             -----                 <---------GLK1(1)                                                            -------                 --------->GLK1(1)                                                       --------->At4g35610  ---------->ID1--------->ARR14(2)                                                       <---------At4g35610 ----ARR11(3)   <---------ARR11(3)           --------->YAB1                              <---------ZAT2 ----ARR11(1)   --------->ARR11(3)           <---------ICU4                            ============== ------ARR10    <---------ARR14(2)         --------->GLK1(2)                           <-----------RAV1(2) --->ARR14(2)   <---------AGP1            --------->YAB1                         <---------HSFC1(2) ----ARR14(2)  <---------CCA1(2)        --------->ANAC58                         --------->HSFB2a(1) ---CCA1(2)  <---------HSFB2a(2)        --------->ANAC58                         <---------HSFB2a(1) ---ARR14(1) --------->HSFB2a(2)   <----------ARF1                        --------------------->WRI1 -MYB111(1)  ------>ZmHOX2a(1)     --------->ETT(2)        <-------TEIL   <----------DOF2--------->ZAT2 -MYB59     <---------LBD16        <---------ETT(2)------>NtERF2 <---------YAB1  --------->HSFC1(2)--   ctttgtagcattgtcctggatctcccttaccatcttgtagacaagaatcatgcctccatgatacattataaatgttctttggaagtttcccagctgcaaa  12579700                                                                                                  ---                                                                                                  ---                                                                                                 <---       <---------ICU4                                                                            ----  --------->TOE2(3)                               ---------->DOF2                               <---- --------->REM1(1)                             --------->TOE2(3)                               <----- ---->ANAC58                                 <---------ARR11(3)                              <------- ---->ANAC58                                 --------->ARR11(3)                              -------- --->DOF2   <---------ANAC55(2)             --------->RVE1(1)                                <------- ==========RAV          <---------YAB1      --------->CCA1(1) <---------ANAC58      --------->ARR11(3) --------->RAV1(1)    --------->YAB1  ----------->GT1         <---------ANAC58      <---------ARR11(3)   gcaacatcaacatcacataagaaatcaaaattgagacatgaagaaaaaatctcaaagttttagtgcttacattgttgagcattgaagaacttgagagctg  12579800                                               <---------bZIP60(2)                                               <---------ANAC58                                         <---------AtMYB61                                         --------->ALFIN1                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC46                                 --------->MYB52(2)                               <---------ARR14(2)                             <---------MYB46(3)<---------ANAC46                             --------->MYB55(2)<---------REM1(1)                          --------->MYB55(2)   <---------ANAC58 ------>SPL1(2)          <---------AtMYB61     --------->ALFIN1 ------>SPL7             <---------DEAR3(1) <---------AtMYB61 ------SPL1(1)           --------->ALFIN1<---------DEAR3(1)         ---------->DOF2 ----->SPL1(1)          <---------MYB52(1)<---------MYB46(3)      <------ZmHOX2a(2) -----SPL7             --------->LBD16<---------AtMYB61       <---------TOE1(3) -----DOF2           <---------LBD16  <-----------RAV1(1)     <---------TOE2(3) --At4g35610<---------ZAT6<---------MYB46(3)--------->ALFIN1 <-----------GT1      --------->LBD16   < ->At4g35610----------->GT1 <---------AtMYB61<---------MYB46(3) ------->GAMYB ------->TEIL    ------- -----------SPL14--------->ICU4--------->ARR14(2)      --------->ICU4      <---------YAB1  ----------   tacggagagcgatagtgtaattatccggtggtggttccttgtggtggtggtgtggcaatgttttaacgatcaaagttatgaatccagagagaagagcagt  12579900                                      ----------->HVH21                                    <---------At4g35610                                 --------->RAP2.6(3)                                --------->MYB52(1)                               <---------SPL7                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                     <----------DOF2                            --------->ARR11(3)                     <---------DAG2                            <---------ARR14(3)            <------ZmHOX2a(2)                            <---------AGP1  <---------TOE2(3)--------------->AtSPL8                            <-----------ARR10            <---------ARR11(3)                            --------->ARR14(3)           <---------ARR14(2)                      ----                            <---------ARR11(3)           --------->ARR11(3)                      ----      <---------MYB46(3)    <---------ARR14(2)  <-------TEIL --------------->AtSPL3            ------ <<<<<<<<<<<<<<<<LFY        --------->ARR14(2) --------->CCA1(2) ------->TEIL                 ------- ---->GT1<---------------------WRI1 --------->At4g35610  --------->ARR14(2)         <----------DOF2 -->AtMYB77             ---------->DOF2    <---------------------WRI1               <---------DAG2   tactacaatggttccaagagtccaaagaaagatcttacggctgactaagatacatccaagatcgacgtactttttcttcttaagcacttttggtccaaga  12580000                                                                                                -----                                                                                                <----                                                                                               ------                                                  <---------ARR14(3)                           ------                                                  <---------ARR11(3)                           ------                                                  --------->ARR14(3)                           ------                                                  --------->ARR11(3)                           ------                                             --------->WRKY18(1)                               ------                                          --------->ANAC58                                     ------                                          --------->ANAC58                                    -------                             ----------->HVH21<---------WRKY12                               <-------                <---------ANAC58     --------->ATERF1(1)                                     --------           <---------ANAC46 <------NtERF2--------->SPL7                                      <-------        <---------MYB52(1)  ------>NtERF2<---------TOE1(2)<------MYB83                       ------>NtERF2       <-------GAMYB   --------->ALFIN1<---------SPL7     <------MYB46(1)                    <------NtERF2      <-----------RAV1(1) <---------DEAR3(1)<--------ZAP1<---------TOE1(2)                  --------- ----->ANAC58   <---------ANAC46     <---------------AtSPL3                      <-----------HVH21 ----->ANAC58   <---------ANAC58  <------ZmHOX2a(1)     <--------P       ------>ZmHOX2a(2) --------->ZAT18 ---->DOF2 <---------ANAC58 --------->LBD16 <-----------HVH21           <------ZmHOX2a(2)  --------->SPL7 -->ANAC46 <---------ANAC58--------->RAP2.6(2)<---------WRKY38(1)    <---------YAB1       --------->ATERF1(1)   agccaactctgttgcgtttcgtcgagtggccgcgaaggagtcgcacggtcaaggtcttgtaggtttcgactacgatcgtcgtctgtcatggagtccgccg  12580100       <---------HSFB2a(2)       --------->HSFB2a(2)    ------>ZmHOX2a(2)    ===============HOX2a_HOX2a  --------->ARR11(3)          ------------------>SPL14  <---------ARR11(3)         --------->ANAC58 ->NtERF2                    --------->O2 --NtERF2                    <---------TGA1a --->RAP2.3(2)           <-----------HVH21 --------->YAB1 --->RAP2.3(3)   --------->ANAC58          -------->HAHB4 --->RRTF1(2)    --------->ANAC46         --------->ICU4 ----->RAV1(1)   ------>MYB46(1)          <---------YAB1 --->RAP2.6(2)   ------>MYB83--------->ANAC58                       --------->At4g35610 --->DEAR3(1)    --------->ANAC58       <---------ICU4        ----------->ARR10 --->RRTF1(3)  <---------ALFIN1     <-------TEIL      --------->GLK1(2) -->RAP2.3(1)  --------->AtMYB61--------------->AtSPL3--------->ARR14(2) --ATERF1(1)  --------->MYB46(3)<-------TEIL          <---------ARR14(2) ->At4g35610=====================HOX2a_HOX2a      --------->YAB1--------->ARR14(2) --At4g35610<------ZmHOX2a(1)--------->TGA1a   --------->WOX13(1)--------->CCA1(2)              <---- >ANAC46    <---------PCF5<------ZmHOX2a(2)<---------ICU4 --------->At4g35610             <------ZmHOX2a(1)   cattgatctctagaggaccaccccatggatcacgtccgtacataatgatcagtcaaaatccgatgagatttgctgaaatttctgagggaagaggaagagg  12580200                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               ------                     <----------DOF2                                                           <-----                  <---------AtMYB61                 ---------->DOF2                            <-----          <---------HSFB2a(1)                  <---------bZIP60(2)                             <-----          --------->HSFB2a(1)         <---------ANAC58                                         <-----          --------->ALFIN1            <---------ANAC55(1)                                      ------          <---------ZAT6              <---------ANAC58                                         ======        <---------ANAC46     <--------P --------->ALFIN1                                       ======        <---------ANAC58  <---------TOE2(3)    <---------ANAC46                                <<<<<<        <---------ANAC58  <---------TOE1(3) ----------->HVH21                                  ------ --ZmHOX2a(1)   ------>ZmHOX2a(1)     <---------ANAC46                <---------ZAT6      <----------   aagagttttggagtgttcctgtggttttagggtaagtgaggcgtgtgtgatgtggaaagtgcaagtgaagaagtgtaagttaactcagtattttgccacg  12580300 <---------GLK1(1) -->MYC2 -->PIF5 ---MYC3 -->MYC3                                                    <---------AHL20(2) ---MYC2                                                 --------->AHL20(1) ---PIF5                                                --------->AHL20(2) -->MYC4                                                <---------ICU4 ---MYC4                                                --------->ATHB51 --->TGA1a                                              <---------AHL20(2) ----TGA1a                                             --------->ICU4 ----O2                                              --------->YAB1 ----ANAC46             <---------DAG2              --------->AHL20(2)              --------->PCF2 ----PIF3(3)            <----------DOF2             <---------AHL20(2)            --------->SPL7 --->O2          <------------CBF              <-----------GT1                   <---------MYB52(1) ==================================bZIP_DOF--------->AHL20(1)                   <---------SPL7 ==================================bZIP_DOF<---------AHL20(1)                  <---------ANAC46     < <<<<HY5    <---------ANAC58     <----------DOF2  <----------DOF2          <------MYB83<---------ALFIN1 --->PIF3(3)<---------ANAC46     ------>ZmHOX2a(1)--------->TOE2(3)        <------MYB46(1)    ------- -GT1       <---------ANAC58  ---------->ID1<---------ICU4 <-----------TBP--------->MYB59 <----------DOF2   tggaattcattcggtcgtgcattggactttatgtccttttttaaaaatattactttaattattttatagctggaatttggtccgtaggcccactttgttg  12580400                                <------MYB46(1)                                <------MYB83                                <---------ANAC46                           --------->WOX13(1)                         ------------>CBF   <---------ARR11(3)                                      -                <-----------HVH21         --------->ICU4                                   --------->YAB1                --------->TOE2(3)         <---------YAB1                                   <---------ICU4               --------->ANAC46 <---------ANAC55(2)                                       <---------AHL20(2)              <---------TOE2(3)--------->MYB46(2)                                         <---------YAB1       --------->ICU4   >>>>>>>>>MYB2   --------->YAB1        --------->ICU4            --------->YAB1 ---------ANAC46<-----------TGA1----------->GT1--------->AHL20(2)                      <---------YAB1 --->ID1     <-----------GT1   --------->MYB59 <---------AHL20(2)               <----------DOF2    --   ttttgggtaatgttttaacgtcagaaaaccaattaggtgaattcatgattttattgcagaagaaatgtttgtctgtaatccactttgtttttataattag  12580500                                        --------->ANAC58                                        --------->ANAC46                                        --------->ANAC58                                         <---                                      <-----------GT1                                    <---------ICU4             --------->ANAC46      <---------GLK1(1)                                     --------->ATHB51             --------->ANAC58     >>>>>>>>>>GATA-1                                       -------->ATHB1             --------->ANAC58<------MYB46(1)                                             --------->ATHB12          <---------ARR14(2) <------MYB83                                               <---------AHL20(2)          --------->ARR14(2) <---------ANAC46                                           <---------YAB1        ------->TEIL        --------->MYB46(2)                                          --------->ICU4      <-------TEIL          --------->MYB59                                             <---------ATHB51 -------->At5g28300         --------->MYB111(1)             ---------->DOF2             --------->AHL20(1) --------->GT1          --------->WOX13(1)  <---------DAG2--------->CCA1(2)           --------->YAB1   agggtaaatgcatttacgccagaaaccaattaggtggatttcacgaccttatgttataagataaaagaaaatttcaaaataccatcaaaaattattgtat  12580600  Previous    Next  AGI:  At4g24260.1    Description:  ATGH9A3/KOR3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 21 (KOR3) [Arabidopsis Thaliana] (GB:Q9STW8); similar to AtGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49720.1); similar to endo-1,4-beta-glucanase [Populus tremuloides] (GB:AAS45400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22253.1); similar to cellulase; endo-1,4-beta-D-glucanase [Brassica napus] (GB:CAB51903.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPr Range:  from: 12577881    to: 12580143    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24265.1    Description:  unknown protein Range:  from: 12580569    to: 12581175    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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