Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                             <------NtERF2                                                                                  ===============HOX2a_HOX2a               --------->LBD16                                                    <------ZmHOX2a(2)        <-------MYC3                                                             <---------ARR11(3)        ------->MYC3                         <---------At4g35610       ==================HOX2a_HOX2a     <---------ALFIN1                        --------->At4g35610       ==============================   -------->P<---------LBD16               <-----------RAV1(2)         --------->HSFB2a(2) <---------DEAR3(1) ---------At4g35610                      <-----------HVH21             ------>ZmHOX2a(1)  =========== -------->At4g35610                    <---------ZAT2                  <---------HSFB2a(2)------>ZmHOX2a(1) ------->ANAC46------>NtERF2           --------->ZAT2             =======================HOX2a_HOX2a- -->ZmHOX2a(1)<---------LBD16          --------->At4g35610        ------>ZmHOX2a(1)   <---------ALFIN1 ---------------->TaNAC69(2)           <---------At4g35610 <---------MYB52(1)    --------->ARR11(3) <   tccgctaccacgttttccggcgagacagaagaaatggactcagcttcagccgagtcgctctgttcgtcctgtcctcgaactaagatcacctcctcggcga  12568400                       --------->At4g35610                       <---------At4g35610                       ------>NtERF2             --------->TGA1a       --------->ZAT2                    ----------->HVH21             <---------TGA1a       <---------ZAT2                 <---------HSFB2a(2)             ===================================bZIP_DOF          --------->HSFB2a(2)             <---------O2          <---------At4g35610         <---------ARR14(2)             --------->O2--------->DEAR3(1)                    --------->ARR14(2)          ----------->HVH21  <------ZmHOX2a(1)              <---------ANAC58 <-------TEIL ---ZmHOX2a(2)         <---------ZAT2<----------DOF2 <---------GLK1(2)--------->MYB52(1) ===HOX2a_HOX2a      <-----------RAV1(2)             <---------ARR11(3)   --------->At4g35610 ===HOX2a_HOX2a     <---------At4g35610      <---------WRKY38(1) ----------------->AGL3 -------->ANAC55(2) --------->At4g35610    <-----------HVH21<---------ANAC58<----------DOF2 ---------ANAC55(2) <------NtERF2  --------->At4g35610   <-----------GT1<------------MYB.PH3(1)   <--   tcacataattttccgacgaggctgcagccgaggactcagcttcacggtcaccacagattttagcgtttccagtaacagcttcatcgacttcataaactcg  12568500                                                                        <---------HSFB2a(2)                                                                        <---------HSFC1(1)                                                                        --------->HSFC1(1)                                                                        --------->HSFB2a(2)                                 <---------ALFIN1                   <----------DOF2  <---------GLK1(2)           --------->ARR14(2)                   <---------ANAC58 <---------At4g35610   <---------ETT(2)                       ------>ZmHOX2a(1) --------->At4g35610  <------ZmHOX2a(2)        --------->MYB46(3)  <---------ANAC58 ----ZmHOX2a(2) --------->MYB52(1)  <---------GLK1(2)   <---------GLK1(1)   atcagcttcttcgctaagaaaccgatcgacaagttccacattctcatcaacaacttggaaattcctctggctttcgagaacacgagcatccatcttcata  12568600                                      <---------ANAC58                                  <---------LBD16                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                         <---------ALFIN1     <---------At4g35610                       <-----------HVH21      --------->At4g35610                      --------->DEAR3(1)    <---------DEAR3(1)                      <---------ETT(1)<---------ANAC58                      --------->DREB2C(2)   <---------RAP2.6(2)                      --------->At1g77200  <---------At4g35610                      --------->DEAR4(1) <---------WRKY18(1)            ------>ZmHOX2a(1) --------->ARR14(2)                                            <--------            ===========================HOX2a_HOX2a                                          <--------            ==========================HOX2a_HOX2a                                          --------->ZAT2       --------->HSFB2a(1)    <---------ARR14(2)    --------->YAB1                 ------->GAMYB    =       <---------HSFB2a(1)------>NtERF2<----------DOF2                 <---------ALFIN1    <---------ZAT2      ------->TEIL <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <---------ATHB12 ----------->RAV1(1) -   ccaaaacgaacatcctctgtaacaccgacaccgatctcgggcttgagcggctgatcagaactcaaatcgttctccaccgtagcaacagaaacgagcttgg  12568700                                       <---------HSFC1(2)                                       --------->HSFC1(2)                                --------->LBD16                                <-----------HVH21                               --------->O2                               --------->TGA1a                               <---------TGA1a                               <---------ANAC46                               <---------O2                            =============MYC_MYB                            ------->GAMYB                            --------->DEAR3(1)                           --------->DEAR3(2)                           --------->MYB46(3)                           <------------AtMYB77                           <---------MYB55(2)                           ==============MYC_MYB                          -------->P  --------->ANAC58                          ===============MYC_MYB                         ================MYC_MYB                         ------->GAMYB--------->ANAC58                         --------->MYB55(1)                        <---------MYB111(2)                                                  <-------     ====================================bZIP_DOF                                            --------     ---------->DOF2    --------->MYB46(3)                                             ----------->GT1 -ANAC58                <---------MYB55(2)                                           ---------->DOF2 -ANAC58                <---------MYB52(2)                                      ---------->DOF2 ========================================bZIP_DOF               ------>ZmHOX2a(2)--------->DAG2    <- --------->DOF2       ----------->RAV1(1)              --------->TOE2(3)    <---------YAB1 ----------   ccaaaaggaaagaaaacaagagagcaacaaccgccgtgagaagcatctctaagaaaacctccatgatcgaagaagatgatgaaaaaggaaagtaagatac  12568800      ---------->DOF2    ------>ZmHOX2a(2)    ======================HOX2a_HOX2a   <------ZmHOX2a(2)   =======================HOX2a_HOX2a  <---------ARR11(3)  --------->ARR14(2)                            --------->DAG2  --------->ARR11(3)                        --------->ANAC58              ----------->GT1  <---------ARR14(2)                        --------->ANAC46             ------------------------>ANAC81 <------ZmHOX2a(1)                ----------->GT1----------->GT1        --------->DAG2 --ARR11(3)                    *TSS     --------->YAB1             <----------ID1 ->ARR11(3)           ---------->DOF2  --------->ICU4             ----------->GT1                ---- --------TOE2(3)   <------ZmHOX2a(1)   <---------YAB1   ---------->DOF2---------->DOF2    ---------->DOF2 ->ARR10     >>>>>>>>>TBF1  ---------->DOF2 --------->ANAC58    ---------->DOF2       <----------ID1   ttaggatctaaagaagaagaaggagaaaggcaaagaatgtaattatacgaaaggttagaaaagaaggaaaggaaaaaggaataaatgagagacaaagaag  12568900                                      <---------AHL20(1)                 <---------TGA1a                                      --------->AHL20(1)              ----------->HVH21                                      <---------AHL20(2)            <---------ZAT2                                     --------->YAB1                 <---------At4g35610                                     --------->AHL20(2)             --------->ZAT2                                  --------->WOX13(1)                --------->At4g35610                                <---------MYB52(1)             ----------->HVH21                               <-----------HVH21               <---------YAB1           <----------DOF2   --------->SPL7               --------->ANAC46          <---------ANAC46    --------->ARR14(2)       <-------TEIL                --------->MYB46(3)        <---------LBD16    --------->KAN4(2)      --------->ARR14(2)          --------->MYB52(1)<---------ANAC58    <---------ARR14(2)     <---------ARR14(2)          --------->ARR14(2)<---------ANAC58   <----------TaMYB80      <---------PCF2              <---------ARR14(2)<---------O2<--------------- ------>DOF2               --------->TCP20            ----------->HVH21  <---------bZIP60(2)<--------   aaagcatattcggctttaaacgggaagcgggtccgtcaattatattttctcaacgcctaaccgctatgactgctgacttggctcttgcggttttattctt  12569000                                                  <---------DAG2                                                  <----------DOF2                                                ------>NtERF2                                               --------->RRTF1(3)                                               --------->RAP2.3(2)                                               --------->DEAR3(1)                                              <------NtERF2                                              --------->DEAR4(2)                       ------>ZmHOX2a(1)     ------>NtERF2                    ------>NtERF2            <---------ATERF1(1)                 <---------ATERF1(1)        <---------DEAR3(1)            ----------->HVH21             --------->DEAR3(1)              <----------DOF2           <---------ALFIN1------>ZmHOX2a(1)--------->ANAC46             ------>ZmHOX2a(2)           --------->AtMYB61             --------->At4g35610           <---------ARR11(3)          --------->bZIP60(2)   <---------ICU4--------->RAP2.3(1)      <---------AGP1          --------->ANAC46--------->TOE2(3)--------->ZAT18             --------->ARR11(3) ------>ZmHOX2a(1) --------->ARR14(2)    <---------At4g35610           --------->ARR14(2) ---------ANAC81--------->DEAR3(1)------>ZmHOX2a(1)                    <---------ARR14(2) -YAB1  <---------ALFIN1  --------->TOE1(3)<---------ZAT18            <---------CCA1(2)  <----------DOF2   atcctcttctccacctcaccggctccttccttaatccttatgcagcgcgccgcttttttttttgctctcactggatctttgtctttggactctttacaaa  12569100                                                             --------->YAB1                                                             ----------->GT1                                                            <---------YAB1                                                           <---------TOE2(2)         <---------WOX13(1)         <------------------------ANAC81       <--------ATHB1              <------------------------ANAC81  <---------ARR14(2)       -------->HAHB4           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->ARR14(2)       <---------ICU4          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->GLK1(2)       --------->ATHB12        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->RVE1(1)      --------->ICU4         <---------AHL20(2)            <---------TOE1(2)      <---------YAB1        <---------AHL20(1)          <---------ANAC46   <----------DOF2    <---------ICU4          --------->AHL20(2)          <---------ANAC58  <---------ANAC58    --------->YAB1          <---------AHL20(2)          <---------ANAC58  <---------ANAC58      -----   --------->ICU4       <---------AHL20(2)          <---------GLK1(1)     <---------ANAC46     <----- --------->YAB1         --------->AHL20(2)         <---------GLK1(2)--------->ARR11(3)    <----------DOF2   ctaaaataatgattggaagagtttttttaattttttttttttttttttttttggattttcgtatgataaaaatctggcttttaaaaaacacacttttatg  12569200                                                                                                 ----                                                                                                 <---                                                                                              -------                    <---------WOX13(1)                               <---------ICU4           -------                  --------->ATHB12                                --------->YAB1             <-------                 <---------YAB1                            <---------At4g35610               --------         --------->TOE2(3)                                 --------->At4g35610              <-------- ---->YAB1------>ZmHOX2a(1)                                <---------ZAT2                  --------->YAB1 ----YAB1--------->TOE1(3)                                 --------->ZAT2               <----------DOF2   aaaactaatttccttaattttgattggatgtttagtgagtttttttgaaataacaaaaaccagctcattgaaaattactcccattccaagctttaatgat  12569300  Previous    Next  AGI:  At4g24230.1    Description:  ACBP3 (ACYL-COA-BINDING DOMAIN 3); acyl-CoA binding. similar to ACBP1 (ACYL-COA BINDING PROTEIN) [Arabidopsis thaliana] (TAIR:AT5G53470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61453.1); contains InterPro domain FERM/acyl-CoA-binding protein, 3-helical bundle; (InterPro:IPR014352); contains InterPro domain Acyl-CoA-binding protein, ACBP; (InterPro:IPR000582) Range:  from: 12566641    to: 12568831    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24231.1    Description:  unknown protein Range:  from: 12568885    to: 12569034    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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