Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ----------->GT1   --------->ANAC55(2)                                <---------ATHB12   <---------ANAC55(2)                                <---------ATHB51 ------>HAHB4                                         --------->AHL20(2) --------ICU4                                         <---------AHL20(2) ------->YAB1                                   --------->ANAC58 ---->YAB1         <------ZmHOX2a(1)            --------->ANAC58                         <----------DOF2 ----AHL20(2)     <----------ID1           --------->DAG2                            <---------GLK1(2) -->AHL20(2)   ---------->DOF2           ---------->DOF2   <-----------GT1 ------>ZmHOX2a(1)   ataatacctatttgttaaaaaggacaattcaagtgagaaaatgaaaaggcacccaaataattcactctgtttaagtcctaaacgactgattcttttatct  12563200    <---------ANAC55(2)    --------->ANAC55(2)                           <---------GLK1(2)    <---------ANAC58                    <---------AHL20(2)    <---------ANAC58                    --------->AHL20(2)    <---------ANAC55(1)               --------->CCA1(2)                                     <-------TEIL   <-------TEIL                      --------->ARR11(3)                     <---------HSFB2a(2) <---------ARR14(2)                  <---------ARR11(3)                     ------>ZmHOX2a(1) --------->ARR14(2)                <---------TOE2(3)      <---------MYB52(1)--------->HSFB2a(2)     <   gaaaatacgtgatgctaaattagtcaatagttgaaataagatttaaaaaatggattatccgttaattcacaaaaattcctagaggtctctctggtacatt  12563300             <---------AHL20(2)                                                     ---------->ID1            --------->AHL20(2)                                         <---------ANAC58         <----------DOF2                                               <---------ANAC58    --------->ZAT6                                         <---------YAB1         <-----------RAV1(1) --------->YAB1                                           --------->TOE2(3)   <---------DAG2 ---------ATHB12          --------->AHL20(2)           ----------->RAV1(1)    <----------DOF2   caatgaacactctttttaatagttgaaaataaacatttgggaagaactaagaagaaacaacattataagatgggcttgggctttttgttgtattgttttt  12563400                 <-----------GT1           <---------AHL20(1)           --------->AHL20(1)                                                           --------->DAG2           <---------AHL20(2)                                                          ---------->DOF2           --------->AHL20(2)                         ---------->DOF2        <---------ARR14(2)          --------->AHL20(2)<----------ID1     <------ZmHOX2a(1)             --------->ARR14(2)    <-----------GT1--------->MYB46(3)      ---------->DOF2                <---------ANAC46          <   tatgttttacaattttatttaacaaacaagatgacaaaaaaaaaaaaaaggactccaaaagtccaaaacagctatggagtatatgagggtaaagtcgtca  12563500                                              ---------->DOF2                                         --------->ARR11(3)                                       --------->HSFC1(2)                                       <---------HSFC1(2)                                       <---------HSFB2a(1)                                       --------->HSFB2a(1)<---------At4g35610      --------->DAG2                 ---------->DOF2      --------->At4g35610                       <     ---------->DOF2        ---------->ID1  <---------HSFB2a(2)                              -------- -----------GT1        <---------MYB52(1)<---------ARR11(3)    *TSS                  <----------DOF2<   ttttacaaaaagcatttttatcttcgttttgtcgtcttcgaaagttctcaaagagaaggcatctgagaaaccccaatctctaatcttcttttcaattcaa  12563600                                                 --------->ANAC46                                              ------>ZmHOX2a(2)                    ------>MYB46(1)                                            --------->ARR11(3)                     ------>MYB83    --                                         <---------WOX13(1)                     --------->DEAR3(2)<--        <-----------GT1                --------->ATHB12                        --------->MYB52(1)<---      <-----------GT1               <----------DOF2                    --------->ZAT18          <---- ---------DAG2             <---------ATHB12 <---------ARR11(3)         --------->ZAT14          <---- ->AHL20(2)         ------>ZmHOX2a(1) <---------YAB1  <---------ATHB12 <---------ZAT18 <---------YAB1 ----------DOF2     =================================HOX2a_HOX2a  ---------->DOF2------->GAMYB <-----   tacttttttttctcaatctctcctctcaaatcaaacaactttgattgatcttcgcaatcgattccacatgaagcgcagtactaccgactctgatttggcc  12563700                                                                                           --------->ALFIN1                                                                                      <---------TOE2(1)                                                                                      <---------TOE1(1)                                                                                   <---------ZAT14                                                                                   --------->ZAT14                                                                                   <---------ZAT18                                                                                   --------->ZAT18                                                                                   <---------SPL7 ------->ALFIN1                                   <---------GLK1(1)               <---------ZAT6 -------------------WRI1                      >>>>>>>>>TBF1                 <-----------ARR10 ------At4g35610                          <------ZmHOX2a(1)                 --------->ARR14(2) -----MYB46(3)    --------->ANAC58  --------->ZAT14     <---------GLK1(2)   --------->GLK1(2) -----DEAR3(1)    --------->ANAC58  <---------ZAT14     --------->ARR14(2)  <---------ARR14(2) ----ORA47(1)<----------ID1<---------------------WRI1   <---------ARR14(2) <---------GLK1(2)       <-   ggtgatgctcacaacgagacaaacaagaagatgaagagtacagaggaagaagaaatcggattctccaatttagacgagaatctagtgtacgaggtgttga  12563800                                                         --------->ANAC58                                              ------>ZmHOX2a(2)                                             --------->CCA1(2)                                             <------ZmHOX2a(2)                                            <---------ARR14(2)                                            --------->AGP1                                            <---------AGP1                --------->TOE2(3)           --------->ARR14(2)                                 ------          ---------->DOF2                   <---------ARR11(3)                                 ------       --------->ANAC46                     --------->ARR14(3)                          -------------       --------->ANAC58                     <---------ARR14(3)                          ------>ZmHOX2a(2)       --------->ANAC58                     --------->ARR11(3)                        --------->ARR14(2)    --------->DEAR3(1)                    ----------->ARR10                           <---------ARR14(2)    <---------DEAR3(1)            <---------ANAC55(1)    --------->ANAC46         <---------At4g35610  <-----------HVH21               <---------ANAC58       --------->ANAC58         <---------ZAT2<---- --------->ANAC46                 <---------ANAC46  --------->ANAC58              --------->At4g35610 --------->O2 <---------ARR11(3)  --------->ANAC55(2)   --------->RAP2.6(3)       --------->ZAT2<---- <---------O2 --------->ARR11(3)  <---------ANAC58  --------->ANAC58              ------------------- --------ALFIN1 --------->TOE1(3) <---------ANAC55(2)  --------->MYB52(1)  <----------DOF2--------->ZAT14   aacacgtcgacgcaaagaccttagctatgtcatcttgcgtgagcaagatctggcacaaaacggcacaagacgagcggctttgggagctgatctgtactcg  12563900                              <---------ZAT2                              --------->At4g35610                         <---------ARR14(2)                         --------->ARR14(2)                    ------>NtERF2              <---------DEAR3(1)                   --------->ATERF1(2)      <-----------RAV1(1)                   --------->LBD16        <---------ANAC46                   <---------ATERF1(2)   <---------MYB52(1)                  <---------ANAC58     <-----------RAV1(1)                  <---------ANAC58    ------>ZmHOX2a(2)     <---------ANAC58                  <---------ANAC46   <------ZmHOX2a(2)     <------NtERF2                 --------->At4g35610<---------AGP1       <---------RAP2.6(2)  <---------ZAT18<---------LBD16    --------->ARR14(2) <------MYB46(1)  <---------ZAT14<------NtERF2<---------At4g35610<------NtERF2           <---------ALFIN1  --------->ZAT14<---------At4g35610--------->AGP1   <----------DOF2    --------->ZAT14 --->bZIP60(2) <---------DEAR3(1)   <---------ARR14(2) <------MYB83 --------->HSFB2a(1) --->ANAC46   --------->ZAT2  --------->ZAT2<---------ANAC46<---------ANAC58      <-----------GT1 -->AtSPL8    ----------->RAV1(2)   --------->ARR11(3)--------->MYB55(2)<---------ZAT14 -------TGA1  --------->At4g35610  <---------CCA1(2)<-------GAMYB--------->LBD16<----------DOF2 -------HVH21 <---------At4g35610 ----------->ARR10<---------MYB46(3)   <---------ZAT18 ---->TaNAC69(2) --------->ATERF1(1)<---------ARR11(3)<---------MYB46(3)--------->ZAT18   tcactggactaacatcggctgcgggcagaaccagctcagatctgttgtgttggcgcttggtggcttccgaagactccactctctttacctctggcctctc  12564000                        <------MYB83                        <------MYB46(1)                        <---------HSFB2a(2)                       --------->MYB46(2)                       --------->MYB59                      <-------TEIL                   <------MYB83                  <---------TOE1(2)               <---------ZAT2             ------->PIF5             <-------PIF5             ------->MYC2             <-------MYC2             ------->MYC3             <-------MYC3           --------->LBD16       --------->ARR14(2)                                                  --------->HSFB2a(2)       <---------ARR14(2)     <------ZmHOX2a(1)  <----------DOF2           <---------HSFB2a(2)   --------->ANAC46<------MYB46(1)             <---------DAG2          --------->TOE1(2) --------->ZAT6   tctaaacccaatccgcgtgctaggttcggtaaggacgagcttaaactcactctttctcttctctcaattcgatactacgagaagatgagtttcactaaga  12564100  Previous    Next  AGI:  At4g24210.1    Description:  SLY1 (SLEEPY1). Identical to F-box protein GID2 (GID2) [Arabidopsis Thaliana] (GB:Q9STX3;GB:Q8LAQ7); similar to SLY2 (SLEEPY2) [Arabidopsis thaliana] (TAIR:AT5G48170.1); similar to F-box protein [Gossypium hirsutum] (GB:ABO09801.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 12563563    to: 12564492    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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