Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ----------->RAV1(2)     --------->ANAC58     <-----------HVH21 <---------At4g35610     --------->ANAC58                --------->ANAC55(2) -------DOF2         --------->REM1(1)     --------->YAB1               ------->TEIL ->ZmHOX2a(2)        <---------ALFIN1     <---------YAB1             <---------YAB1 ---ARR11(3)    ----------->GT1          <---------ARR11(3)        --------->YAB1 -->ARR11(3)   --------->DAG2        --------->YAB1     <---------AHL20(2)     --------->YAB1 -YAB1        ---------->DOF2    ---------->DOF2 <------ZmHOX2a(1)--------->ICU4                   --   tttaacttgtcacaaaaaaagttacacctgattttaaaagcatgatcataaggaatattgaatttagaatgatgaatccatacataattcaaattttgct  12514700                                                                                              <------                                                                                     --------->ATHB12                                                           --------->ICU4 <---------ANAC55(2) <------                             <----------DOF2  --------->DAG2          <-----------HVH21<---------YAB1                ----------->GT1     <----------DOF2     <------ZmHOX2a(1) --------->ANAC55(2) <------        ------->TEIL     <----------DOF2     ---------->DOF2     <---------YAB1     --------->ICU4 ------->YAB1<---------MYB52(1)  <-----------GT1  --------->CCA1(2)<----------DOF2----------->GT1  <-   ataaaaaatgaatcagttgggataattctttcttttaactttgtataaaaagttatgaggaatatttatctttgtcaagtgatgaagtgattagtgactt  12514800                                                                         --------->ICU4                                                                       --------->YAB1               -                                                                    ----------->GT1                 <                                                                   ------->PIF5                     -                                                                   ------->MYC2                     <                                                                   ------->MYC3                     -                                                                   <-------MYC2                     <                                                                   <-------MYC3                     -                                                                   <-------PIF5                     =                                                                   ------->MYC4                     =                                                                  --------->O2                      -                                                                  --------->TGA1a                   -                                                                  <---------TGA1a                  <-                                                                  <---------O2               --------                                                           =================bZIP_DOF        ---------         ---------->DOF2                         --------->ATHB51 <---------ANAC55(2)       <--------       --------->MYB46(3) <---------WRKY38(1)    --------->AHL20(2)<-------MYC4             <--------      <-----------------AGL1                    <---------YAB1    <--------ABF1     --------->At4g35610 ---ANAC58               --------->WRKY18(1)    --------->ICU4    <---------ANAC46  <---------HSFC1(2) ---ANAC58              <-----------HVH21     --------->YAB1 --------->ANAC58       --------->HSFC1(2) ---ANAC46       <-------TEIL         ------>ZmHOX2a(1)    ---------->DOF2--------->YAB1    --------- --------ZAT18  <--------P<---------WRKY12   <---------ATHB12--------->ANAC58--------->TOE2(3) <-----   gtgaacttaaccaaagaggtagatggggtcaaggccattcctagccattcattatttatagtaaagccacgtgtaataatcttagaagcttacagatata  12514900     <---------At4g35610     --------->At4g35610  --------->TGA2(2) <-----------TGA1 <-----------HVH21 -------->ANAC58 ---------TGA1a -------->O2 ---------O2 -------->TGA1a ---------bZIP60(1) -------->bZIP60(2) =============================bZIP_DOF =============================bZIP_DOF -------->ANAC58                                                 --------->At4g35610 -------->ANAC46                                                 <---------At4g35610 ----------STF1                                              <-----------HVH21                 ------ ->CCA1(2)                                              --------->ALFIN1                     -------- >ARR14(2)                                            <---------ANAC58                      --------- -ARR14(2)                                            <---------ANAC46                     ---------- -ARR11(3)                       ------>ZmHOX2a(2)    <---------ANAC58  ----------->GT1--------->At4g35610 >ARR11(3)                <----------DOF2      <----------DOF2 <---------WRKY12       --------->ANAC58 ------GT1         <----------DOF2            <---------ANAC46 <---------WRKY38(1)    --------->ANAC58   ccacgtcagcacaaaacagttcttttgtctttcgatcgctctcaaatcgcgttttgtcgtggaggtcaactgatcagaaaaatatagcaagcagaaagtg  12515000                <---------YAB1               <---------AHL20(2)               <---------AHL20(1)             <---------YAB1           <---------ICU4           <--------HAHB4    --------->At4g35610    <---------At4g35610               <---------AHL20(2)    --------->ZAT2 <-----------GT1    --------->AHL20(2)                              *TSS ----->GT1 --------->ATHB51       <---------AHL20(2)                              --------->ZAT18 --->GT1   -------->ATHB1         --------->AHL20(2)                              <---------ZAT14 >DAG2     --------->YAB1     --------->AHL20(2)      ------------>CBF      <---------HSFB2a(2) >DOF2    --------->ICU4      <---------AHL20(2)------------>CBF            --------->HSFB2a(2)   aaaaacagctgaattattatttttctatacaaaaaattaaaaaattagtatccaatttcaatggggtttcgacttgttctcgagtaaactactagtctct  12515100              <---------ARR14(2)              <---------GLK1(2)              --------->ARR11(3)              <---------ARR11(3)              --------->ARR14(2)                           --------->ARR14(2)       <---------ZAT2                                      ------->TEIL   <-----------GT1       --------->At4g35610                  --------->ATHB12  ----------->HVH21            <---------AtMYB61       --------->ZAT2    <<<<<<<<<TBF1 <---------AHL20(2)  <---------ARR14(2)          <----------DOF2       <---------At4g35610  <<<<<<<<<TBF1  <-------TEIL   <---------CCA1(2)         <---------YAB1   atctctctcagctccagattttgtttcttcttcttctgtgttaaattcatttgatttgttgtatctgaaggcgaaattactggtttctgatttttggtgg  12515200                    --------->ANAC58                                <---------MYB46(3)                   <---------LBD16           <------ZmHOX2a(1)     <---------AtMYB61                  --------->MYB52(1)       --------->ALFIN1      <---------MYB46(3)             ---------->DOF2              <------ZmHOX2a(1)     <---------AtMYB61             -------        <-------GAMYB                   --------->ALFIN1        --------->ALFIN1              <------       <---------DEAR3(2)         --------->MYB55(2)            <---------DEAR3(1)            -------       ----------->GT1            <---------MYB46(3)         --------->ALFIN1                 <------       <---------MYB46(3)        --------->ALFIN1          <---------ANAC58    <---------AtMYB61      <---------RAP2.6(2)        <---------ANAC46      <---------ZAT6    <---------ZAT6    --------->At4g35610      <---------DEAR3(1)      --------->ALFIN1         <---------AtMYB61 <---------AtMYB61 <---------At4g35610     <---------ZAT18--------->ANAC58   <------ZmHOX2a(1)   <---------ANAC58    <---------ZAT6--------   tattcagggcggttttaaagcgacggaagaagatggtgggaggaggaggaggtagtagtggtcgtggtggtggtagtggtagtggtagtagtaagcagca  12515300   <---------ARR14(2)   --------->ARR14(2) -->ZAT2 ---ZAT2 -->At4g35610      ---------->DOF2                     --------->ZAT2                           <---- ---At4g35610     ------>ZmHOX2a(1)           --------->ANAC46  <-------GAMYB                  <----- --->RAV1(1)  ------->TEIL       --------->MYB52(1)    <---------At4g35610      <------ZmHOX2a(2)   gagaggtttctctatgaatcctaaagactataagctaatggaagaaataggccatggagctagcgctgttgtctatcgagcgatctatctccctactaat  12515400                               --------->At4g35610                        <---------ANAC58                              ====================================HOX2a_HOX2a       <------NtERF2          ------>ZmHOX2a(2)                           <---------ANAC58      ------>NtERF2   <---------AGP1                                      <---------ANAC46    <------NtERF2     --------->ARR14(2)                             <---------ICU4    --------->ATERF1(1) ------>ZmHOX2a(2)          --------->MYB52(2)--------->ATHB51   <---------ATERF1(1)<---------ARR14(2)          <-------TEIL       --------->ATHB12 -----ATHB12          --------->ARR11(3)  --------->WOX13(1)        <---------YAB1                <-- ----TOE2(3)         <---------CCA1(2) --------->YAB1      ------>ZmHOX2a(1)  <---------YAB1<--------   gaagtcgtcgccatcaagtgtttggatctcgatcgctgcaatagcaatctggttcgttttcctccatcttattattgcttatgaattagagaggctttag  12515500           ------>ZmHOX2a(2)          <---------GLK1(1)          <------ZmHOX2a(2)          <<<<<<<<<GATA-3          <<<<<<<<<GATA-1          <<<<<<<<<GATA-4          <<<<<<<<<GATA-2         <---------ARR11(3)         <---------ARR14(2)                                     <---------ARR11(3)         --------->ARR14(2)       ------->TEIL              <------ZmHOX2a(1)         <---------AGP1       <---------TOE2(3)        --------->ATHB12         --------->ARR11(3) <---------AHL20(2)       <---------WOX13(1)      --------->GLK1(2)    <---------ANAC46       <---------AHL20(2)        <--------P --------->ARR11(3) <-----------RAV1(1)       --------->AHL20(2)       <-------GAMYB           <---------GLK1(1) --------DOF2         <---------YAB1               <---------MYB46(3)       <---------GLK1(2)    <--- --DOF2 <---------CCA1(2)------->TEIL             <---------AtMYB61    <------ZmHOX2a(1)      <------   cttttgtcgtagatctcttgttttatgaatttaatgtatttttgtttttgttttggttgataggatgatattaggagggaatctcagactatgagtttga  12515600  Previous    Next  AGI:  At4g24090.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN62286.1) Range:  from: 12512746    to: 12514602    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g24100.1    Description:  protein kinase family protein. similar to kinase [Arabidopsis thaliana] (TAIR:AT4G10730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77043.1); similar to hypothetical protein OsI_033178 [Oryza sativa (indica cultivar-group)] (GB:EAY79219.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62926.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 12515086    to: 12519851    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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