Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ------->MYC2                      ------->PIF5                      <-------MYC3                      <-------PIF5            --------->ALFIN1           <-------MYC2           ------->PIF5           <-------PIF5           ------->MYC2           ------->MYC3           <-------PIF4           <-------MYC3           ------->PIF4           ------->MYC4           <-------MYC4--------->ALFIN1          =====================bZIP_bZIP          <---------O2<-------MYC2          --------->TGA1a          <---------TGA1a          --------->O2------->MYC3          --------->PIF3(3)                                                    <---------DOF5.7(2)          <---------PIF3(3)                                                   <---------WRKY12         <-------TEIL--------->ANAC55(2)                                      <---------WRKY38(1)         ------------>OsbHLH66     <---------WRKY12                          --------->WRKY18(1)     --------->ANAC58<---------ANAC55(2)                                    <-----------HVH21     --------->ANAC58<---------ANAC46                                <---------MYB46(3)     --------->ANAC46<---------bZIP60(2)    <-----------RAV1(1)     <---------WOX13(1) ------>ZmHOX2a(2)   <---------O2  <---------WRKY38(1)              <--------P<---------WRKY45      < -------->At4g35610  <---------TGA1a        --------->ALFIN1       <-------GAMYB                 <--- --------ARR11(3)    --------->O2 --------->WRKY18(1)            <---------AtMYB61           <------- ------->ARR11(3)    --------->TGA1a  --------->MYB46(3)         --------->ALFIN1       ---------->DOF2 -----MYB52(1)  <---------GLK1(1)<-----------HVH21 --------->ZAT14<---------MYB46(3)<----------DOF2 -   tgatctcaaggcacgtgggtatcacgtggtgctcgggtcaaccgatgtgtcgctgtacaagaaggctgtggttgatgaggtcaacgcttttaaagcgtag  12512300                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                          <---------ICU4                                                                          --------->YAB1                                                                         <---------ATHB12                                                                    --------->ANAC58                                                                    --------->ANAC46                                                   --------->ANAC55(2)   --------->ICU4                                                   <---------ANAC55(2)   <---------YAB1          ---- ---------ANAC46                                 --------->ICU4     --------->ANAC58         -------- ------ZAT6                                 ----------->GT1        ------->TEIL            <---------MYB52(1) --ZAT14                                  <----------DOF2         <-----------GT1      -------------- -------->ETT(1)                          <---------ANAC46     --------------->AtSPL8  <----------DOF2   tgtcggaattagattagagtctgaataaaacgggaattagagtgctttgtaataagtgatgagtttatgtaccccatgattatcttctactttgttagtt  12512400                                              <-------TEIL                                             --------->ARR14(1)                                             --------->CCA1(2)                                            <---------ARR14(2)                                            --------->ARR11(1)                                            --------->ARR14(2)                   <---------At5g28300        <----------DOF2                     <---------GLK1(2)                <----------DOF2        --------------------->WRI1        ----------->ARR10                --------->LBD16 ----->MYB59           <----------DOF2    <---------TOE2(3)          ---------->DOF2 ->MYB52(2) <---------MYB52(1)            <---------YAB1  ---------->DOF2 --------->RAP2.6(2) ------->WRI1 --------->MYB52(2)          <---------TOE1(3)         <---------AHL20(2)            <--   atgtctactactttgttagttttgacttttgagcaagtcttgttaagattcgcattatccaaaagaaaatttaaagccgcattaacagtgtttagctctg  12512500                        --------->LBD16                       <---------ANAC58                                             <---------MYB52(1)                       <---------ANAC58                                            <---------RAP2.6(3)                  --------->ICU4                                                  <---------ANAC58             ----------->GT1    <---------ALFIN1            <----------DOF2       <---------ANAC58           ---------->DOF2 --------->WRKY18(1)     <----------DOF2           <---------ANAC58     ---------->DOF2  <---------LBD16             <---------ANAC58           <---------ANAC58 -------ZAT6--------->DAG2<-----------HVH21       <---------ANAC58          <-------TEIL   gtgttactaaagaaaaagtgattatgcgggtcaaacacttctcaaatagtttgctttgatttctttggagaactgaaatgcatgccgtttcgaaatatta  12512600                           <---------------AGL15                     --------------->AtSPL3             <---------LBD16            <---------ANAC58            <---------ANAC46            <---------ANAC58   ---------->DOF2                                       <---------ANAC46         <---------MYB52(1)--------------->AGL15                         <---------ANAC46       <---------ANAC58   <-----------------AGL1                         <---------ANAC58       <---------ANAC58   ----------------->AGL3                         <---------ANAC58          <-   ------->TEIL  >>>>>>>>>>GATA-1                                       ---------->ID1  <----------DOF2  <---------AtLEC2   --------------->AtSPL8                         <---------ANAC58 <---------ANAC58  <---------ANAC58<---------GLK1(1)                         --------->AHL20(2)<-----------GT1 <------  <---------ANAC58--------->GLK1(1)              ------->TEIL       <---------ANAC58 <---------ANAC58   gaatgcatgtcgtttcgtggatttcagtaccagtaaaggctaatgctgatgcatcgttgcattttaaaaatcgtgtcgtttttcattccgttttagtggc  12512700                                 <----------DOF2                              <-----------GT1                           --------->ARR14(2)                           --------->ARR14(3)                           <---------ARR14(3)                           <---------GLK1(2)            <----------DOF2                           --------->ARR11(3)          --------->YAB1                  ------>MYB83        -------->P         <---------ARR14(2)          <---------ICU4                  ------>MYB46(1)    --------->ANAC46       <---------ARR11(3) *TSS    <---------ATHB12        --------->AtLEC2    <-- --------ALFIN1          ----------->ARR10  --------->YAB1       --------->ZAT14    ----------------- ---ZAT18         --------->ARR11(3)   <----------DOF2--------->ICU4        <---------AtLEC2      <--   cactcttcgcaaccagataagaactcgaagattttctttttctttatcaaaatgcaatctttatctctgcaatcgcttccatggaaaccaaattcagtga  12512800          <---------AHL20(2)   --------->TOE2(3)   --------->TOE1(3)  ----------->RAV1(2)      --------->ANAC46 -------DAG2               --------->ANAC58                                                     <---- >AGL3    --------->AHL20(2)                                     --------->ANAC46               ----- --------DOF2              --------->ANAC58             <---------ANAC46              <-------TEIL  <   ctttacctgaaattaatcttttgaatcccaagcaattgactgcctcgagttctcagtatcgtagaactcgaaactggagaattagaagttcgtcggaaga  12512900                          <---------ARR14(2)                        ----------->ARR10                       <------NtERF2                      --------->LBD16                     <---------ANAC46                     <---------DEAR3(1)                    <------NtERF2                    --------->ATERF1(1)                    <---------LBD16                   <---------ERF1                   ------>NtERF2                   <---------RAP2.3(1)                   <---------RRTF1(1)                  <---------bZIP60(1)                  <---------ANAC46                  --------->ATERF1(2)                  <---------RAP2.3(3)                  <---------DEAR3(1)                  <---------RRTF1(3)                  <---------RRTF1(2)                  <---------O2                  <---------ATERF1(2)                  <---------RAP2.3(2)                  <---------RAP2.6(2)                --------->MYB52(1)             <---------MYB52(1)           <---------ANAC58                   --------->LBD16           <---------ANAC58--------->CCA1(2)<---------LBD16                     --------->At4g35610 -----ARR11(3) ----------->TGA1           <-----------HVH21      --------->ALFIN1               <---- ---->ARR11(3) ----------->HVH21   <---------GLK1(1) <---------ANAC46 <------ZmHOX2a(1)   <----------ID1 ---------REM1(1)--------->RAP2.6(3)     ----------->HVH21--------->GLK1(1)     <---------At4g35610   taatgtagcaatttcgagtgacggcggagatttgaagaattctctgtccggtattgtgggaaatcaagtggaggagctattgagcagagaagagaacaaa  12513000                  ---------->DOF2                                         --------->ANAC58             <---------HSFB2a(2)                                      --------->CCA1(2)    <----------DOF2      <---------ANAC46                     --------->CCA1(2)    <---------WOX13(1)  <-------TEIL                         --------->ARR11(3)   <---------ANAC58  --------->HSFC1(2)                      <---------ARR11(3)   <---------ANAC58  <---------HSFC1(2)              <---------ZAT2  <----------ID1   <---------AtLEC2--------->DAG2          <---------ANAC46  <---------ARR14(2) -----TOE2(3)--------->HSFB2a(2)  --------->ALFIN1   --------->At4g35610  --------->ANAC58         <-   ggtttgcttgatggtctggaaaaagcttcgttgagagtggagattgcgaagagagagctcgaagatatagagagacaagaaattgaggcgaaattgctac  12513100                                          <---------ANAC58                              <------NtERF2             --------->ZAT2   <-----------RAV1(2)             --------->At4g35610          <---------ANAC58             <---------ZAT2   <----------CDC5             <---------At4g35610        --------->ARR11(3)        --------->WOX13(1)   --------->At4g35610      <---------AHL20(2)     --------->LBD16     --------->YAB1         ----------->RAV1(1)    <---------YAB1          --------->DEAR3(1)                   --------->CCA1(2)   --------->AHL20(2)       --------->RAP2.3(2)  <---------HSFB2a(2)        <---------WOX13(1)   <---------AHL20(2)      --------->RAP2.3(1)   --------->HSFB2a(2)      -------->HAHB4   <---------AHL20(1)    <---------ARR14(2)      --------->HSFC1(1)       --------->ATHB12         <-   --------->AHL20(1)    --------->ARR14(2)      <---------HSFC1(1)      --------->ICU4          <--- -----ZmHOX2a(1)    <---------ATHB12--------->ALFIN1      <---------ZAT6 <---------YAB1    <---------   aggattatattaatcagctcgaatcaagagccgcagaggtgagagcttgttctcgaaatggtgttagatatgaaaatgattgaacatttgattcttttgc  12513200  Previous    Next  AGI:  At4g24080.1    Description:  ALL1 (ALDOLASE LIKE); carbon-carbon lyase/ catalytic. similar to HpcH/HpaI aldolase family protein [Arabidopsis thaliana] (TAIR:AT4G10750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62931.1); contains InterPro domain HpcH/HpaI aldolase; (InterPro:IPR005000); contains InterPro domain Pyruvate/Phosphoenolpyruvate kinase, catalytic core; (InterPro:IPR015813) Range:  from: 12511394    to: 12512300    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g24090.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN62286.1) Range:  from: 12512746    to: 12514602    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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