Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <-------TEIL                                                             <---------GLK1(2)                                                             --------->ARR14(2)                                                             <---------ARR14(2)                                                            --------->At4g35610     <----------DOF2                                                        <-----------HVH21         --------->ZAT18                                                       --------->TGA1a            <---------ZAT18                                                       =================================bZIP_DOF                                                      <-------MYC3                <-------TEIL                                  <-----------TGA1    <-------MYC2           ---------->DOF2                           <<<<<<<<<MYB98             <-------MYC4       --------->TOE2(3)                         <---------YAB1               ------->MYC2       --------->YAB1                        <---------TOE2(3)             ------->MYC3      ----------->GT1 ----DOF2      <---------YAB1     <-----------HVH21 ------->TEIL   >>>>>>>>>>>>>>>>>LFY    <---------YAB1   cactcacatttgttcttgttattgtttatgttaaatcgtcactcacattgtatgcacatgtcagattcagaccaatgttaaaagtgcattattttgtttg  12511000                                                                                          <---------ANAC55(2)                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                          --------->ANAC55(2)                                                                                          --------->bZIP60(2)                                                                                          --------->ANAC55(1)                                                                                          --------->ANAC58                                                                      <----------DOF2   <---------ALFIN1                           ------->TEIL                      ----------->GT1  <----------DOF2                ---------->DOF2             --------->DAG2  <---------------AtSPL8   --------->ANAC46   --------->ALFIN1        <-------TEIL    ---------->DOF2  --------------->AtSPL8 <-----------GT1 <---------ANAC58      <---------------AtSPL8               --------->DAG2 <---------ARR11(3) <---------ANAC46      --------------->AtSPL8              ---------->DOF2 --------->ARR11(3) <---------ANAC58--------->DAG2   --------->TOE2(3)  --------->HSFB2a(2)  <---------CCA1(2)     <----   gaagcgtgtgagaaaacaaaaagtttatgtacataacataaatccaaaagtactactcgaataaagtacaaactttatatcttttaaactccacgtaata  12511100                                                                            <---------YAB1                                                                           --------->ARR11(3)                                                                           <---------AHL20(1)                                                                           <---------ARR11(3)                                                                           --------->AHL20(1)  <-----                                                                          --------->CCA1(1)   -------                                                                      >>>>>>>>>>GT-3b         <------                                                                   <---------TOE2(3)     --------->MYB52(1)                                                             --------->ARR11(3)          <-----------GT1                                           <---------ANAC58  <---------ARR11(3)       --------->YAB1 -------GT1        --------->YAB1          <---------ANAC58 --------->YAB1--------->RVE1(1)  --------   actcatttttgtttgttttaatcaaaaattcaaacgtctaaaatttcgtcttaaataagaaatgatattaagaaaaatatctttggattaataacagatc  12511200                                --------->AHL20(2)                                <---------AHL20(2)                               --------->AHL20(2)                          ------->GAMYB                          ------------>CBF                        ------>MYB83                        -------->P                        ------>MYB46(1)                       --------->MYB55(1)                      <---------MYB111(1)     <------------CBF                      <---------MYB111(2)    --------->ATHB12                         ---------->DOF2                      <---------MYB59       --------->AHL20(2)                        <---------AHL20(2)      --------->YAB1  --------->MYB46(3)    <---------AHL20(2) <---------ICU4        --------->AHL20(2) -ZmHOX2a(2)          --------->AtMYB61     --------->AHL20(1)--------->ICU4    ----------->GT1    <- -->ARR11(3)          <---------MYB46(2)   --------->AHL20(2)<---------TOE2(3)--------->DAG2   ------ ---ARR11(3)       <-----------GT1<---------GLK1(2)         --------->YAB1   ---------->DOF2  ------- ->At4g35610  ----------->GT1  <---------AHL20(2)  ---------->DOF2      ----------->RAV1(1)   -------   accgaaaattagaatatggttttaccaacccaattaaattctcaaattaattggaaagagaataatgttgacaacaacaaaaaggaaataaatcgcatgc  12511300                                                                                                  --- ---------->DOF2                                                                       ------------>CBF --------ATHB12                                <<<<<<<<<TBF1                 --------->ZAT14   ------ ------>CBF          <<<<<<<<<TBF1  <---------TOE2(3)                  ------>ZmHOX2a(1)      <------ -->ANAC58        <<<<<<<<<TBF1    <-----------GT1     ------>ZmHOX2a(1) <---------ALFIN1     <------ -->ANAC58 ------->TEIL <<<<<<<<<TBF1       <<<<<<<<<TBF1          <---------ALFIN1   --------->YAB1   aatgaaaggaatgaatcttcttcttcttcttctctattaacgcttcttcttcttctccttcttcatcaccctcctccacttctctcagtcacaatggcga  12511400                  <-----------TGA1                 --------->ANAC46                 ============================bZIP_DOF                 <---------ANAC55(2)                 --------->ANAC58                 --------->ANAC55(2)                 ============================bZIP_DOF                 --------->TGA1a                 <---------O2     --------->RVE1(1)    <---------ARR11(3)    --------->ARR11(3)                                                    <---------ANAC58    --------->GLK1(2)                             <---------DAG2          <---------ANAC58          -   --------->RVE1(1)                           <---------ALFIN1          <---------ZAT2             <   --------->CCA1(1)                         ------>NtERF2               --------->ZAT2        ------ ------>AtMYB61  --------->O2----------->GT1--------->ANAC46          --------->LBD16          ------ >NtERF2         --------->ANAC58         --------->HSFB2a(2)        --------->ANAC46 --------->At4g35610 ----ID1         <---------TGA1a      <---------GLK1(2)       <----------DOF2        ------>ZmHOX2a(2) ---ETT(2)     <-----------GT1    ---------->DOF2 <----------DOF2   <---------LBD16 <------ZmHOX2a(2)   ccaaaaaatctctgaaatcacgtctccaagatggagaaaagcttctcggccactttcttctctccttttctccggagcttgcagagatcgctgcaagagc  12511500                                              <---------ANAC46                                              <---------ANAC58                                              <---------ANAC58                                             <-------TEIL                                           --------->ARR14(2)                                           <---------ARR14(2)                                         <------NtERF2                                        --------->LBD16                                        ------>NtERF2                                       <---------ANAC46                                      <---------LBD16                                      <------NtERF2                                      --------->ATERF1(1)                                     <---------ERF1                                     <---------RAP2.6(3)                                     <---------RAP2.3(1)                                     ------>NtERF2                                     <---------ATERF1(1)                                    <---------RAP2.3(3)                                    --------->DEAR3(1)                                    <---------RRTF1(2)                                    <---------DREB2C(2)                                    <---------RAP2.3(2)                                    <---------ATERF1(2)                                    <---------RAP2.6(2)                                    --------->ATERF1(2)                                    <---------ANAC46                                    <---------DEAR3(1)                                   --------->ATERF1(1)                                   <------NtERF2                                   --------->DEAR3(2)                                        <-------                                   <---------LBD16            <---------ZAT14          <--------P<---                                  <---------ATERF1(1)         --------->ZAT14         <-------GAMYB                                  --------->ABI4(2)         --------->ANAC46         <---------MYB46(3) -------->ARR14(2)                ------>NtERF2          --------->ZAT14             --------->MYB55(2) ---------ARR14(2)               --------->ALFIN1        <---------ZAT14           <---------MYB52(1) --->ZAT2                     <---------DEAR3(1) ---------->DOF2                  --------->At4g35610 --->At4g35610 <---------ANAC46  <---------DEAR3(1)     <----------DOF2           <---------At4g35610   tggatttgacttcattgtcgtctaccttgagcacggtgccggcgggattcgtgaagcgcttcactgcattcgagcaatcgaagccgctggttgctccact  12511600                                                           --------->ANAC58                                                           --------->ANAC58                                                           --------->ANAC46                                                          --------->RAP2.6(3)                                                          --------->SPL7                                                         --------->MYB52(1)                                                         <---------ATERF1(1)                  ------>ZmHOX2a(2)                                                        ----------->HVH21                    <------ZmHOX2a(2)                                                       --------->DEAR3(2)                    --------                                                       --------->MYB46(3)                   ---------                                                     --------->ARR14(2)                     <--------            ----------->RAV1(1)                      <---------ARR14(2)                     ---------           --------->ANAC46                     ------>ZmHOX2a(2)                           <--------           ----------->HVH21                   <---------GLK1(1)                            ---------           <---------ETT(1)                    <------ZmHOX2a(2)                            <--------        ------->TEIL                          <---------AGP1 <------NtERF2                  <--------      --------->REM1(2)                       --------->ARR11(3)                            <--------      --------->ZAT14                         <---------ARR11(3)--------->ICU4            -----------    --------->LBD16                 ---------->DOF2----------->HVH21                   --------->LBD16   <---------ANAC46           <---------At4g35610 --------->TOE1(1)                  <---------LBD16 ------>ZmHOX2a(1)       <---------ANAC58    <---------CCA1(2) <----------DOF2     <---------ARR14(2) --ALFIN1 --------->MYB46(3)  --------->At4g35610 --------->TOE2(1)                --------->ARR14(2) --------HVH21           <---------ANAC58 <---------MYB52(1)------>NtERF2   <---------ATHB12---------   gtcctccgtgtacccgacattagtcaggcttgagctaagaaagcgttagatctcggacccgacggcattatgttcccaatggtcgaaaccggaagatctg  12511700                                              <---------DEAR3(1)                                             <------NtERF2  --------->LBD16                            <---------At4g35610 ->CCA1(2)                        <XXXXXXXXXXXXXXXXXXXXMIR4228 >AGP1                          --------->MYB52(1) -ARR14(2)                     ----------->HVH21 >ARR14(2)                     ------>ZmHOX2a(1)   <---------ANAC58                    <---------TOE2(3) -ARR11(3)              --------->ARR14(2)   --------->At4g35610                   <----------DOF2 >ARR14(3)             <---------CCA1(2)     <---------ZAT2                 <---------GLK1(2) -ARR14(3)         <---------ANAC58          --------->ZAT2                --------->At4g35610 ---ARR10          <---------ANAC58        <---------RAP2.6(2)             <---------ZAT2 -AGP1<---------RAP2.6(2)      ----------->TGA1    <---------ANAC58        <---------At4g35610 >ARR10            <---------ANAC46       <---------LBD16   <---------MYB52(1)<---------LBD16   <---- >ARR11(3)         <---------AtLEC2  --------->ALFIN1      <-------GAMYB   --------->ZAT2       -----   catccgaggcggtctcgttttgcctgtatcgtcctgacggtgttcgcggctgtgcttactccgttgtgagagactccagcttcggatttaacgaagggta  12511800                                                  --------->ARR14(2)                                           <------ZmHOX2a(2)                                          <---------ARR14(2)                                          --------->ARR14(2)                  --------->ANAC58                                    <---------ZAT2<---------ARR14(2)  <---------AHL20(2)                                   <---------TOE1(2)                  --------->AHL20(2)                                  <-----------RAV1(2)                 --------->AHL20(1)          <---------At4g35610<---------ANAC58 ------>ZmHOX2a(1)       <---------YAB1----------->GT1 ----------->GT1             <---------ANAC58--------->TOE2(3)       --------->AHL20(2) -----ARR14(2)     <---------ARR11(3)   ----------->ARR10      <-----------GT1--------->ANAC58 ---->ARR14(2)     --------->ARR11(3)  <-------TEIL     <----------DOF2--------->ATHB12 <---------AHL20(2)   tttgggtaattacgctgataagctcttcattatgtgccaggttcgatcctcaaatcccctttgattttcaattttattggacgaaattgttaaattgaat  12511900  Previous    Next  AGI:  At4g24080.1    Description:  ALL1 (ALDOLASE LIKE); carbon-carbon lyase/ catalytic. similar to HpcH/HpaI aldolase family protein [Arabidopsis thaliana] (TAIR:AT4G10750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62931.1); contains InterPro domain HpcH/HpaI aldolase; (InterPro:IPR005000); contains InterPro domain Pyruvate/Phosphoenolpyruvate kinase, catalytic core; (InterPro:IPR015813) Range:  from: 12511394    to: 12512300    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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