Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              ----------->RAV1(1)           --------->MYB46(3)           --------->REM1(1)       --------->At4g35610  --------->ANAC58  --------->ANAC46  --------->ANAC58                           <-----------GT1 ------>ANAC58                     <---------ANAC58 ------>ANAC58                     <---------ANAC58 ------>ANAC46                   <------------------------ANAC81                      --------->ZAT18 ------>RAV1(1)         <---------ZAT18  <----------DOF2                              <---------ZAT18 ---->AtMYB61          --------->AtLEC2 <---------DAG2                              ------->PIF5 --->MYB46(3)      <-----------HVH21 <-----------GT1<<<<<<<<<TBF1                   <-------PIF5 ->ANAC46----------->RAV1(1)    <----------DOF2  <<<<<<<<<TBF1     <----------DOF2------>ZmHOX2a(1)   acacaagacagcaacaacacgagtcatgcactctctttcttaccttttttcttcttcttcatccgtcttcttttgctcttgttcctcgtgccctcttctc  12442200                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                   --------->ARR11(3)                                   <---------ARR11(3)                                  ------->GAMYB                                 --------->MYB46(3)                                ------>MYB83                                ------>MYB46(1)                                    ------>ZmHOX2a(2)                              --------->TOE2(2)                                   <<<<<<<<<GATA-4                              --------->AtMYB61                                   <<<<<<<<<GATA-2                              ------->GAMYB                                       <<<<<<<<<GATA-3                              --------->TOE1(2)                                   <---------GLK1(1)                             --------->MYB46(3)                                   <------ZmHOX2a(2)              <-----------HVH21--------->MYB52(1)                                 <<<<<<<<<GATA-1             --------->ANAC46<---------MYB52(2)                                  <---------AGP1          <-------TEIL       <---------MYB55(2)                       --------->ANAC46        <------         --------->CCA1(2)  --------->ANAC46                        <---------ALFIN1          <------        --------->ARR14(2)  --------->ANAC58                    <-----------HVH21--------->ARR11(3)        <---------ARR14(2)  --------->ANAC58                 <---------AtLEC2    <---------ARR11(3)   ggtttctacagatacaggtcatagtcatacaaccaacgatctctcttgactctctccatctgtgcatgtcacacacgagtatagatctcttctctgcttt  12442300              --------->ANAC58              --------->ANAC58              <------NtERF2             <---------LBD16             ------>NtERF2            <---------ANAC46                                                  ------>NtERF2       <---------ANAC58                                                      ----------->HVH21       <---------ANAC46                                                      --------->ANAC46       <---------bZIP60(2)                                                   <---------ETT(1)       -       <---------ANAC58                                                  <---------GLK1(1)          -  --------->CCA1(2)            --------->CCA1(2)                         <---------HSFB2a(1)        < --------->ARR11(1)<---------At4g35610                                  --------->GLK1(2)      <----- --------->ARR11(3)<---------ZAT2                                       --------->ARR14(2)     <----- <---------ARR14(2)--------->At4g35610         <------------CBF         <---------ARR14(2)    ------- ----DOF2--------->ALFIN1     --------->ARR14(2)               <------------CBF               <------ ---DAG2 <---------DEAR3(1)   <---------ARR14(2)      <---------TOE2(3)<---------GLK1(2)     --------   atagatatggcgaggcgcggaagctgttcgacgatatgcctgaatgaaaaattgcaaaggtttcgaattgtcagaatctccgacaaggctgataatttta  12442400            --------->HSFC1(2)            <---------HSFC1(2)            <---------HSFB2a(1)            --------->HSFB2a(1)            <---------ZAT2      --------->At4g35610 --------->HSFB2a(2)                                                                                < <---------HSFC1(1)                                                                                 - <---------HSFB2a(2)                                                                              <-- ---------------->AGL1                                                                         ------ ---------------->AGL2                                                                   --------->ANAC58 -----------------AGL1 <---------HSFB2a(1)                                      <---------ANAC58 ---- ----AHL20(2)<---------GLK1(2)                                    ------>ZmHOX2a(1)    ---------->DOF2 ----YAB1   --------->At4g35610                             ------>ZmHOX2a(1)   <---------ANAC58 <--- -->AHL20(2)<------NtERF2                              <---------ANAC58        <---------ZAT2  <----- ---AHL20(2)<---------At4g35610                        <---------ANAC58        --------->ZAT2 ------- ->YAB1  <------NtERF2 --------->HSFB2a(1)        <-----------RAV1(1)    --------->ANAC46--------->ANAC58   attccagaagcggcagcttcttcgagcgttctatctctctcgttctcttactctggtgcttcctcttcctcgtctactccaagcttggccaaagccatga  12442500    --------->YAB1   <---------YAB1   <---------TOE2(3)                               <---------ICU4 ---------YAB1                                    <---------YAB1 -------->ICU4                                 <---------MYB52(1) -------ICU4                              <---------ARR14(2) --->YAB1                                 --------->GLK1(2)            <------ZmHOX2a(1) ----->ICU4                              <---------GLK1(2)   --------->TOE2(3) ------YAB1                <---------ANAC58   <-------GAMYB ----------->GT1                        <- ----ICU4                  <---------ANAC46  --------->ANAC55(2)     <---------TOE2(3)          ----- -->ICU4       <--------P  <---------ANAC58  <---------ANAC55(2)     <---------TOE1(3)  <----------DOF2   tgattatggtaatgcaggtaagtgttcttccttgtttgagagagattccgttatcatttcaaatgttaattaaggaaacaaatttagggtcttttaactt  12442600           --------->LBD16          --------->HSFB2a(2)          <---------HSFB2a(2)      --------->KAN4(2)     <----------TaMYB80     <---------KAN4(1)                           <---------AHL20(2)     --------->KAN4(1)                           --------->AHL20(2)    <---------ARR14(2)                          --------->AHL20(2)    ---------->TaMYB80                          <---------AHL20(1)    --------->ARR14(2)                          <---------AHL20(2)    <---------KAN4(2)            ------>ZmHOX2a(1) <---------ANAC46                <---------At4g35610 ----------->GT1                 --------->At4g35610                                         -------- --------ANAC46     <----------DOF2             --------->AHL20(1)                   <------ZmHOX2a(2) ---->ALFIN1    <---------WOX13(1)         <---------ATHB12                      <---------WOX13(1)   ggggggtatattccagagattgctatattgtgttcctctgaagaaatcaatttattttgtagatagaattgggaattacactgatggatcagtctcaaag  12442700                                                                         ----------->GT1                                                                      ------------>AtMYB77                                                                    --------->DAG2                                                             ------>ZmHOX2a(1)                                                             --------->LBD16                                       ---------->DOF2     ----------->RAV1(2)                             --------->ANAC58              --------->At4g35610    --------->GLK1(1)        --------->ANAC46              <---------At4g35610 -->DOF2                     --------->ANAC58      <----------DOF2---------->DOF2 <---------ARR11(3)   acactgaattccacgagttctgtcttccctcaggccactgagaaagaaaacaacttttgtctcctgagaaaaggccagttacaagatgtgtatgagcatg  12442800                                                         --------->ANAC58                      ------                                                         --------->ANAC58         ------>ZmHOX2a(1)                          ---------->DOF2            --------->ANAC58         <---------ARR11(3)                      ------>ZmHOX2a(2)              --------->ANAC58      ----------------------->TaNAC69(2)                     --------->At4g35610          <---------KAN4(2)    <---------At4g35610  ---------                     <---------At4g35610         --------->YAB1   <---------HSFB2a(2) --------->CCA1(2)                    <---------ARR14(2) --------->HSFB2a(2)        --------->HSFB2a(2)<---------ARR11(3)                    --------->ARR14(2) <---------HSFB2a(2)       <---------LBD16------>ZmHOX2a(2)             <----------DOF2     <-----------RAV1(1) --------->ANAC46  <---------ZAT2--------->ARR14(2)   ttcttgtgaacaacgctttgttgatctgcaaagttgtgttgccagaacgaagaataagcaagaaaactctggaagctcgtgatcctagatatgtcaatct  12442900       <---------GLK1(2)                                                             <-----------GT1 --->YAB1                           ----------->GT1                             ----------->GT1 >WOX13(1)   ---------->DOF2     <---------ZAT2                     <-----------RAV1(2)   tgaagacaagagtctcaaagttaatggctcatcacagcttgtgaataatgggactcgttataggttagaaccagatggaaatgggtataactacgcttct  12443000                                                                        --------->YAB1                                                                       --------->ICU4                                                                       <---------YAB1                                                                     --------->YAB1                                                                    <------ZmHOX2a(2)                                             --------->At4g35610   <---------ARR11(3)                                       ---------->DOF2             --------->ARR11(3)                                   --------->ANAC58      <---------AtLEC2                         <--             <---------TOE2(3)     --------->ANAC58      <---------ANAC58   --------->ANAC55(2)   <--            ---------->DOF2    --------->ANAC58          <---------ANAC58   <---------ANAC55(2) <----         --------->At4g35610   --------->ANAC58 --------->ANAC58  --------->YAB1       --------->GLK1(1)       --------->ZAT18         --------->ANAC46 --------->ANAC58 --------->ICU4        <---------GLK1(1) ----------->HVH21     <------ZmHOX2a(2)     --------->ZAT2    ---------->DOF2 --------->GLK1(2)-----   gctatgaagggtgctaaagttgtggatcacaacaaggaagcaaaaggagctagcaatgtgcttggcaaagatcatgataagtatctaagaaatccctgtt  12443100  Previous    Next  AGI:  At4g23950.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22882.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68972.1); contains InterPro domain Sad1/UNC-like, C-terminal (InterPro:IPR012919); contains InterPro domain Galactose-binding like (InterPro:IPR008979) Range:  from: 12442563    to: 12444340    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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