Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------AHL20(1)                                    --------->AHL20(1)                       <---------ETT(2)                                    <---------AHL20(2)             --------->AHL20(2)                            <---------AHL20(2)                    <---------AHL20(2)  <---------ARR14(2)     --------->AHL20(1)         <---------HSFB2a(2)    <---------ZAT14  --------->ARR14(2)     <---------AHL20(1)         --------->HSFB2a(2) <---------ANAC46  <---------ARR11(3)     --------->AHL20(2)      <---------YAB1<---------ARR11(3)  --------->ARR11(3)    <---------AHL20(2) <------ZmHOX2a(1)   --------->AHL20(1) <---------CCA1(2)     --------->ICU4<---------AHL20(2)      ------->TEIL  --------->ZAT14 --->AHL20(2)     ----------->GT1   --------->AHL20(2)    ----------->GT1 <---------ZAT6 ->YAB1         --------->ICU4<-----------GT1<---------RVE1(1)<---------CCA1(2)               -------   aacatatcttgttgggaaattagtaaatattttatcaatttattaggattttttatagaaacgtatatattatttagtgtagacaatagagagaaacaaa  12419000                                                                              <---------RVE1(1)                                                                             --------->ARR11(3)                                                                     --------->MYB46(3)                                                                    ------>MYB83                                                                    --------->ANAC58                                                                    ------>MYB46(1)                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                  ------->GAMYB                                                                  --------->AtMYB61                                                                  <---------ALFIN1                                                                 --------->MYB46(3)                                                                 <---------MYB55(2)                                                                -------->P   <---------ARR11(3)                                                                ------>MYB46(1)                                           ------>MYB83         ------>MYB83 <---------GLK1(2)                                           ------>MYB46(1)    --------->AtMYB61                                         --------------->AGL15<---------MYB111(2)             <---------YAB1              <---------MYB59      --------->MYB46(3)     >>>>>>>>>GT-1                      ----------------->AG  <---------MYB55(2)  ----------->GT1                  --------->At4g35610       --------->MYB46(3)  <---------MYB46(3)               <---------At4g35610    <----------ID1 ---------->DOF2 --------->ALFIN1  <---------TOE2(3)    ----------------->AGL3<---------MYB111(1) <-----------GT1  -- --->DOF2  <----------DOF2      ---------->DOF2 <---------AtMYB61<---------MYB111(2)     <---------WRKY18(1)   gaagtggttaatacttttattgagataacgcgttgaaagcttaccaaattttggtggattacgaccaaccacccaaaaagatttttacgcttgactaagt  12419100                                                                         --------->AHL20(2)                                                                      --------->WOX13(1)                                                                --------->YAB1                                                               <---------ATHB51                                                               --------->ICU4                                                             <---------ICU4                                                            <---------YAB1                                                            --------->ICU4                                                         <---------YAB1  <---------AHL20(2)                                                         <---------TOE2(3)--------->MYB52(1)                                              --------->ARR14(2)-------->HAHB4                                              <---------ARR14(2)<---------ICU4   --------->ANAC58                                              --------->GLK1(2)<---------YAB1    --------->ANAC58                                 <---------ATHB12       <-----------GT1 <---------ATHB12         ---- ---->ZmHOX2a(1)      <----------DOF2         ------->TEIL--------->YAB1--------->ICU4          <----   cctggttctctcttagtctctaccctttgctatcaaacattcagtctgaatctgagattaacataattatggcaattaatggcactcaaacaaaaaacac  12419200                                                     <---------ANAC58           ------->GAMYB                                            <---------TOE1(3)                --------->MYB52(1)                                      <---------AHL20(2)                     ----------->RAV1(1) ----->ATHB12             ------>ZmHOX2a(1) <---------TOE2(3)     <---------AHL20(2)      ------->TEIL -----YAB1     ---------->DOF2       <---------YAB1  <---------ANAC58    ---------->ID1<---------MYB52(2)   gattgagtcaaaaacaaaaaagaaattcctagtttgatttttatttatggttttgacttgagagggattttttttgtcccaacagagaaacgaacattgt  12419300                                                                                           --------->LBD16                                                                                          --------->HSFB2a(2)                                                                                          -----------                                                                                          <---------HSFB2a(2)                                      ------->GAMYB <---------ALFIN1                     <---------LBD16                                      --------->TOE2(3)                                 <-------TEIL            <-----------HVH21        --------->MYB46(3)<---------DAG2                --------->HSFC1(2)     --------->AHL20(2)            --------->MYB52(1)  <----------DOF2               <---------HSFC1(2)     <---------AHL20(2)          <---------MYB59   <---------ZAT18                   <---------HSFB2a(1)  <----------DOF2         ----------->RAV1(2)    --------->PCF2                      --------->HSFB2a(1)   gaggcttttaaatgggtcatatagacttatctgggcctaaccacaaaaaatggcccacttttggagaaactttgaaaataaacccgaaggttcgggaaaa  12419400                                     <---------------AGL15                                    <-----------------AGL2                          <---------ETT(2)                         <------NtERF2                        <---------ATERF1(1)                        ------>NtERF2--------------->AGL15                       --------->DEAR3(1)                      --------->ATERF1(1)                      --------->RAP2.3(1)                              ---------->DOF2                      <------NtERF2 <-----------------AG            <----------ID1                     <---------RAP2.3(1)       <---------ZAT14  ---------->DOF2           <---------DOF5.7(2)    *TSS     <-----------GT1        <-----------------AGL1  --------->ANAC58             --------->ZAT14    ----------->GT1 <---------DEAR3(1)         --------->ZAT14---------->DOF2            <---------ZAT14 >GT1 ----------->GT1<---------ATERF1(1)<----------DOF2     --------->ANAC58      ------->TEIL   tacagagagagaaaatttccagtcgccgtcgtcaacattctccttttggtacacagacgagaacgaaagagcgaaaagaagatgaacgtagttcacggtt  12419500                                                                             --------->ANAC46           --------->ANAC46                                               <---------REM1(2)          ------>ZmHOX2a(1)                                               <---------ZAT14      <---------GLK1(1)                       <---------TOE1(3)--------->ANAC46  --------->GLK1(2)     --------->ARR14(2)                      <-----------RAV1(2)  ------->TEIL   <-----------ARR10     <---------ARR14(2)                    ------>ZmHOX2a(1)   --------->AtLEC2 <---------GLK1(2)    <------ZmHOX2a(1)                 <-----------GT1      <---------YAB1 --------->ZAT14      <-----   tgaagaggattcctcgcatcaaattccctcagagacatattaatccttcaggttttcgattatccatgaaactctctacacagaatctatgttatttttt  12419600                                                ----------->GT1                                            --------->ZAT14                                            <---------ZAT14                                            <---------SPL7            --------->CCA1(2)              <---------DAG2              <---------------AtSPL3     <---------ARR14(2)        <---------ANAC58                 <---------ANAC46            --------->ARR14(2)        <---------ANAC58  --------->ATHB12<---------------AtSPL8------->TEIL                 -------- ------GT1    <----------DOF2       <---------AHL20(2)     <---------AtLEC2         --------->ATHB12   ccacaattttgctcggctttttctcgcttgattcgaattttttttgtgtacggtttcattttcatgaatcagatatgagattgtattcatttggctgtga  12419700                                                                   <---------GLK1(2)                                                                   --------->ARR14(2)                                                             <-------TEIL     <----------DOF2                                        --------->CCA1(2)    <---------ANAC58       <---------WOX13(1)              --------->ARR14(2)    <---------ANAC58     --------->ATHB12                  <---------ARR14(2)  <-----------GT1       <---------YAB1 --------->AHL20(2) <------ZmHOX2a(1)                      <--- ->At5g28300<------ZmHOX2a(2)--------->ATHB12       <-------TEIL   <---------ARR14(2)    <---------ARR14(2)   atttttgctttccgatctatttcgctctgattgatttgcatttacatagttagattcaaaggatacacagatttgtttagccattgaatcgaatcgtgtt  12419800                 <---------YAB1               <---------ICU4                                                       =================               <--------HAHB4                <----------DOF2                        <----------DOF2               --------->YAB1            <-----------GT1             <---------MYB46(3)              <---------ATHB12   <---------TOE2(2)                 <---------MYB52(1)               <              --------->ICU4--------->ARR11(3)               --------->YAB1      <-----------GT1  ---     <---------CCA1(2)      <---------ARR11(3)              --------->ICU4     <----------DOF2    <-- ------MYB46(3)-------->ATHB1    <---------TOE1(2)          <---------ATHB12   ======================   tgttatcaaatctcgaatcattatagagaagctcttatgttttttagcttttggtttgggtaatcatctgtttgttatgcgatttactttctggcattgc  12419900  Previous    Next  AGI:  At4g23882.1    Description:  heavy-metal-associated domain-containing protein. similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT1G30473.1); similar to hypothetical protein OsI_033892 [Oryza sativa (indica cultivar-group)] (GB:EAY79933.1); similar to hypothetical protein OsI_036204 [Oryza sativa (indica cultivar-group)] (GB:EAY82245.1); similar to heavy metal-associated domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22362.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 12417563    to: 12418903    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g23885.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24165.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69543.1) Range:  from: 12419404    to: 12420477    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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