Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------At5g28300                                                                <-----------GT1                                                               <---------YAB1                                                             <--------ATHB1                                                             <--------HAHB4                                                             --------->ATHB51           --------->YAB1                                    <---------ICU4      --------->ZAT18                                        --------->YAB1      <------NtERF2                                         --------->ICU4     <---------DEAR3(2)                             <---------ANAC58  --------->ETT(2)    <---------DEAR3(1)                              <---------ANAC58  <---------ETT(2)    --------->ETT(1)--------->ICU4        <---------YAB1    <---------ATHB51   --------->RAP2.6(3)        <---------YAB1 <---------YAB1 <---------ATHB12   <---------ORA47(1)-------->HAHB4      <---------GLK1(2)  --------->AHL20(2) -------ANAC58--------->ARR11(3)       --------->ICU4     --------->YAB1        <---------REM1(1) -------ANAC58<---------ARR11(3)       <---------YAB1    <---------YAB1  <---------ALFIN1   ccttggtcggcactaatatctaattatcgaccattaatgtcatgattcttatttgcgttacaataattactgtcgacacttgttgtagttcttagttttt  12375800                                         <---------ZAT18      --------->YAB1                                         --------->ZAT18    --------->ANAC58                        -                                      <---------ANAC46--------->At5g28300                       <----               ---------->ID1         <---------ANAC55(1)   --------->ANAC58                   <-----    <-----------GT1              --------->WOX13(1)  ----------->GT1             <----------DOF2-----   gttttttatctagttttgtctctaaatttcaatttcaattaagtgtacatttggactgtaacaagcatagttttgacaattgtctttcattcatttcatc  12375900                                         -------->HAHB4                          --------->RVE1(1)                         --------->GLK1(2)                         --------->ARR11(3)      <---------ARR11(3)                  ----------->GT1        <---------ICU4   --------->bZIP60(1)   <---------ARR11(3)<---------YAB1   <---------bZIP60(1)  --------->RVE1(1)--------->YAB1       --------------->AtSPL8 <-----------GT1--------->DAG2          --------->ICU4        <---------------AtSPL8--------->ZAT14 ---------->HVH21----------->GT1        <---------ATHB51  <---------GLK1(2)         <---------ZAT14 -----ICU4     ---------->DOF2        <---------ICU4   --------->YAB1             --------->ANAC46 ----YAB1    --------->YAB1           --------->YAB1<----------DOF2             --------->ZAT6 ---->ATHB12<---------ATHB12      --------->ZAT6 --------->ARR11(3)    --------->AHL20(2) ---------->DOF2   atttgacatcaccaatgaaaagttaaaaatctcttaacactaattatgaaatgtctttcatattcttgtacatatatataaaacactaaactcaaagtgt  12376000                                             <---------------AGL15                                             --------->TOE2(3)                                             --------------->AGL15                                            ----------------->AGL3                                            ----------------->AGL1                                            ----------------->AGL2                                         <---------ALFIN1        <----------DOF2                                         --------->AtMYB61     <---------YAB1                                         <---------MYB111(2)  <---------ARR11(3)                                         --------->DEAR3(1)   --------->ARR11(3)                      <-------TEIL      --------->ANAC46      <---------AHL20(1)          <---------GLK1(1)                     --------->CCA1(2)<---------ALFIN1        --------->AHL20(1)          --------->CCA1(2)         ---------->DOF2             <---------ZAT18  ---------->DOF2                    --------->ARR14(2)      --------->AHL20(2)      ------->TEIL ------>MYB83      --------->RVE1(1)           <---------ARR11(3)     --------->AHL20(2)    <---------ATHB12------>MYB46(1)   --------->CCA1(1)           --------->ARR11(3)   ttagcaaataaaaaagaatttagatacaaatgaatcttgtccacctcccttaaacagaaagaaatatctttgtcaaaagttttttttataagatattcga  12376100                                                                      <---------AHL20(2)                                                                     --------->AHL20(2)            <-                                                                    ----------->TBP                --                 ---------->DOF2                                  ------>ZmHOX2a(1)              <---      --------->AHL20(2)                                        ------>ZmHOX2a(2)                ----      <---------AHL20(2)                   <---------AHL20(2)  <------ZmHOX2a(2)                 ----  <---------AHL20(2)                       --------->YAB1     <---------ARR14(2)               <-----  --------->AHL20(2)                       --------->AHL20(2) --------->ARR14(2)               ------  --------->AHL20(1)          ----------->GT1                 <---------ARR11(3)               <----- --------->AHL20(2)      ---------->DOF2--------->YAB1        --------->ARR11(3)               ------ <---------AHL20(2)  ---------->DOF2--------->ZAT6        ---------->DOF2    <-----------GT1   ------   aaattaaattaaataccaaaaaagaaagaaaggagtaaacactaataatatgagacgtttcaaagatcctataaaatagtcactctctaccattacatgt  12376200     ------>NtERF2    *TSS  ------>NtERF2  <---------At4g35610 --------At4g35610 ------->At4g35610 ------ZAT14 ----->ZAT14                                                                       ------>NtERF2<---- ----->ZAT18                                                                    --------->At4g35610 --MYC2                                  <----------DOF2                        <---------At4g35610 ->MYC4                                <---------DAG2                           ------>ZmHOX2a(1)  <- --MYC3                           <-----------HVH21                      <---------CCA1(2)  <-------- ->MYC3   --------->AHL20(2)   --------->O2                          <---------ANAC58      --------->AHL20(2) ->MYC2<----------DOF2        ------>ZmHOX2a(1)   <---------ALFIN1   <---------ANAC58      <---------AHL20(2)   gctctgccgcttttaaatctctcatcttcttcctcgtgtcactctttctctcacactctgcaaaaacattttcttgtctctcctctgcccaaattttttt  12376300                ------>ZmHOX2a(1)                --------->HSFC1(1)                <---------HSFC1(1)      <------ZmHOX2a(1)    --------->LBD16                                              --------->At4g35610   <---------HSFB2a(2)         ---------->DOF2           --------->DAG2   <---------LBD16          --------->ANAC58            ---------->DOF2  <----------DOF2   --------->HSFB2a(2)      --------->ANAC58         ----------------->AGL2 -------GT1     <---------HSFB2a(2)    <-----------GT1--------------->AGL15         <-----------GT1<- ---------DOF2  --------->HSFB2a(2) <----------DOF2 ------>ZmHOX2a(1)    <---------DAG2      ------>ZmHOX2a(1) -AHL20(2)--------->KAN4(2) --------->ANAC46     ------>ZmHOX2a(1)     ------>ZmHOX2a(1)<----------DOF2   tctttccaggaatatttcctagaaaaacccaagcaaagctttaaccccttcctcctccaaaagtagcatcttcctctttttctatttctcctttcctctt  12376400                                                                                      --------->ANAC58                                                                               --------->ARR11(3)                                                                               --------->GLK1(2)                                                                               <---------ARR11(3)                                                                               <-----------ARR10                                                                         --------->LBD16                                                                        <---------HSFB2a(2)                                                                        --------->HSFB2a(2)                                                                       --------->HSFB2a(2)                                                                       <---------ANAC46                                          ---------->DOF2              <---------LBD16--------->ANAC58                                     <-----------GT1     <----------DOF2--------->LBD16   --------->ZAT2                           ------>ZmHOX2a(1)         <-----------GT1   <---------HSFB2a(2)<---------ZAT2 <---------CCA1(2)        --------->TOE2(3)      <---------DAG2       <---------LBD16 --------->ANAC46 --------CCA1(2)          --------->TOE1(3)      <----------DOF2   <----------DOF2 <---------REM1(2)   cttatctctctctcgtttgtgaacgattccttaagaatataaccaaaagcccttttctcctttcttcaactttccgggaaaaatcttcacgcagcaaggt  12376500                                          --------->HSFB2a(2)                                   ---------->ID1                              <----------DOF2                             <----------DOF2       --------->AHL20(2)      <---------DAG2                             <---------DAG2  --------->YAB1                <----------DOF2                        <---------ANAC58  <---------------AGL15     <---------TOE2(3)                        <---------ANAC58  <---------HSFB2a(2)   ------>ZmHOX2a(1)                      <-----------GT1 <----------DOF2           <----------DOF2              >>>>>>>>   ttctctctcggctctcgcagtgtttttcgtgccttttgttctttctataaaaaaaaaattcgcgtcctttaagaaaactttttccacctagagaagaaga  12376600                                                                           <----------DOF2                                                                          <---------ANAC58                                                                    <---------DAG2                                   --------->AHL20(2)               <----------DOF2                                   --------->YAB1         ---------->ID1  <---------ANAC58                                --------->YAB1        <----------DOF2   <-----------GT1 >TBF1                       <----------DOF2   <----------DOF2 <----------DOF2   agagtatcactcttgttgttcaagtttctctctttaataaaaaatccatctttattctttgtcttctttcctttttgctttccctaatctctatgttata  12376700  Previous    Next  AGI:  At4g23750.1    Description:  CRF2 (CYTOKININ RESPONSE FACTOR 2); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor CYTOKININ RESPONSE FACTOR 2 (CRF2) [Arabidopsis Thaliana] (GB:Q9SUQ2;GB:Q8L701); similar to CRF1 (CYTOKININ RESPONSE FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G11140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65840.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 12376204    to: 12378034    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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