Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->REM1(2)                                                                                         <------NtERF2                                                                                         <---------ANAC46                                                                                        ------>NtERF2                                                                                       <---------ANAC46                                                                                      <------NtERF2                                                                                     <---------ORA47(2)                                                                                     <---------RAP2.6(1)                                                                                     <---------RAP2.3(1)                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                     <---------RRTF1(1)                                                                                     <---------ERF1                                                                                     <---------DEAR4(2)                    <---------At4g35610                                             <---------RAP2.6(2)                    --------->At4g35610                 --------->ARR11(3)          <---------RAP2.3(2)               ----------->HVH21                        <---------ARR11(3)          <---------RAP2.3(3)               --------->WRKY38(1)              --------->ANAC46                    <---------DREB2C(2)              <-----------HVH21                <---------LBD16                      <---------RRTF1(3)           <---------LBD16                    --------->MYB52(1)     <---------------------WRI1  <---          --------->MYB52(1)                 <---------ZAT14       <---------ANAC58 <---------RRTF1(2) --------->DOF2--------->WRKY12     --------->GLK1(2) ----------->ARR10<----------DOF2--------->ATERF1(1) -TEIL   <-----------GT1   --------->ALFIN1  <---------REM1(2)     <---------ANAC46 <---------DEAR3(1) ->CCA1(2)<---------At5g28300  <-------TEIL  ----------->HVH21     <---------ANAC58 --------->ALFIN1   aaaaaagagatttaccggtgaccgctgagatggtgcataatctggacttcacggcgaacatcttcaatgtcgtctttgtgaacaaggcggcgcgtaggga  12327100                                                      <---------MYB46(2)                                                     --------->ANAC58                                                     --------->ANAC58                                                   <---------bZIP60(1)                                                ----------->HVH21                                              <---------ANAC58                                              --------->TGA1a                                              <---------ANAC58                                              <---------ANAC55(2)       <---------ZAT2                                              --------->ANAC55(2)       --------->ZAT2    <---------TOE2(2)                                             <-------TEIL               --------->At4g35610                                     --------->CCA1(2)--------->AtMYB61 <---------At4g35610 <--------         ----------->HVH21  <----------DOF2<---------SPL7        --------->ANAC58--------->AtMYB61       --------->ANAC46     ============================bZIP_DOF --------->MYB46(3)------>MYB83       --------->ANAC58     --------------------->WRI1<---------MYB111(2)    --------->ANAC58       --------->ANAC58 ---------->ID1 <---------ANAC46 ------>MYB46(1)------>MYB46(1)    <---------TOE1(2) <---------ANAC58       <---------CCA1(2)<---------------AtSPL3  --------->ANAC58<---------MYB59 ---- <---------ANAC58     <---------ANAC58 <---------TOE2(1)--------->MYB52(1)   --------->ANAC58    ---- ------WOX13(1)       <---------ANAC58 <---------TOE1(1)------>MYB83   ------>MYB83------>MYB46(1) --   ttgacttgcaagcgacctgttgtttcgtctctttgtgagttacgaggtacgtgacaccaaactggccacgaccaagctcacgaccaaactcataggttct  12327200                            ----------->HVH21                            <---------ETT(1)                           ------>ZmHOX2a(2)                          --------->ARR14(1)                          --------->CCA1(2)                          <------ZmHOX2a(2)                                --------->LBD16         --                         <---------ARR14(2)                               --------->HSFB2a(2)     ---                         --------->AGP1                                   <---------HSFB2a(2)     <--                         --------->ARR14(2)                               <---------ANAC46       <---                 --------->ORA47(1)                             ------>ZmHOX2a(2)            <-------                 <---------RAP2.6(3)                           --------->ARR14(1)            <-------                 ------>NtERF2                                 --------->CCA1(2)             <-------                --------->DREB2C(2)                            <------ZmHOX2a(2)             --------                <---------ETT(2)                              <---------ARR14(2)             --------                --------->DEAR3(1)                            <---------ARR14(3)             <-------                --------->RAP2.6(2)                           --------->ARR14(2)         ----------->HVH21                ----------->HVH21                             --------->ARR14(3)        --------->DEAR3(2)               --------->SPL7         <---------At4g35610     <---------ARR11(3)       <------ZmHOX2a(2)       ------>ZmHOX2a(1) <---------ARR11(3)        <---------ANAC46      <---------LBD16------>ZmHOX2a(2)       ==========================HOX2a_HOX2a      --------->ALFIN1------>NtERF2       <---------ARR14(2)       ===========================HOX2a_HOX2a     <---------AtMYB61----------->RAV1(2)--------->ARR14(2) --------->SPL7--------->DEAR3(2)     <---------ZAT2          --------->ARR11(3) ----------->HVH21<-- -GLK1(2)   --------->MYB46(3)        --------->At4g35610    --------->GLK1(1) ----------->RAV1(2)--- ----------->AtSPL3      --------->ARR11(3)  ----------->ARR10--------->AGP1 <---------ARR14(2)<----- ----------->AtSPL8    ----------->ARR10  <---------ANAC46   <---------GLK1(1)------>NtERF2 <-------- ------->LBD16--------->At4g35610     --------->ZAT2        ----------->ARR10--------->ARR14(2)------   ccgtacttcctccatcggccgacctaagatccgaccattctgctgagtagatgtggtggaacgagatccgcctgttccggagcctgacgatccgacggtt  12327300                                                                                           <---------TOE1(2)                                                                                        ------>ZmHOX2a(2)                                                                                       =============HOX2a_HOX2a                                                                                       <------ZmHOX2a(2)                                                                                     <------NtERF2                                                                                    <---------MYB46(3)                                                                                   <---------ANAC58                                                                                  --------->ATERF1(1)                                                                                  <------NtERF2                                                                                  <---------LBD16                                                                                 <---------MYB46(3)          --------->ARR14(2)                                                     ------>NtERF2<------        ----------->ARR10                                                       --------->ALFIN1     --------->LBD16                                                            <---------DEAR3(1)   <---------LBD16        --------->LBD16                                   <---------ORA47(1)------- <---------ARR14(2)       ------>NtERF2                                    ====================HOX2a_HOX2a --------->ARR14(2)      --------->ANAC46                                  <------ZmHOX2a(1) <------ZmHOX2a(1) ------->LBD16          <---------LBD16                                    ===================HOX2a_HOX2a ------>ANAC55(2) <---------ANAC58                                      <------ZmHOX2a(1)  <---------TOE2(2) -------ANAC55(2) <---------ANAC58                                      =======================HOX2a_HOX2a ------LBD16      <---------ANAC46                                   =========================HOX2a_HOX2a --HSFC1(2)     ------>NtERF2                                        <------ZmHOX2a(1)<---------ARR14(2) --DEAR3(2)    --------->ANAC46                                    --------->ALFIN1<---------ANAC46 --MYB46(3)    <---------DEAR3(1)                                 <------ZmHOX2a(1)<---------ANAC58 ->HSFC1(2)   <---------LBD16                                     ============================HOX2a_HOX2a ->HSFB2a(1)------>ZmHOX2a(2)              --------->ZAT18        =============================HOX2a_HOX2a --HSFB2a(1)<---------LBD16<---------MYB52(1)               <------ZmHOX2a(1)<---------DEAR3(1) -------HSFB2a(2)<------NtERF2<------MYB83 <---------ZAT18  ==================================HOX2a_HOX2a ------>HSFB2a(2)------>NtERF2----------->GT1               ===================================HOX2a_HOX2a ----ARR14(2) --------->LBD16 <------MYB46(1)            <------NtERF2--------->ALFIN1--------->ARR14(2) -DEAR3(1)<---------ARR14(2)<-----------RAV1(2)         --------->LBD16 ======================HOX2a_HOX2a --->ARR14(2) --------->At4g35610  <-----------GT1    <---------LBD16==========================HOX2a_HOX2a   ccggaaccggatgatccgcggcgttctccggcaggtttaacatggtggactacgttgccggaggaagaggaggaggaggacggtggcggatcggaggatt  12327400                                                                                               <-----                                                                                           <---------                                                                                    <---------YAB1                                                                                 --------->GLK1(2)                                                       <---------ATHB12         <---------GLK1(2)           <---------DEAR4(1)                        --------->WOX13(1)   <---------GLK1(1)========== ---ARR14(2)               ---------->DOF2      --------->DAG2          <---------CCA1(2) <---------ANAC58 -->ARR14(2)<-----------RAV1(1) <----------DOF2---------->DOF2       *TSS------->TEIL     <---------ANAC58   tggacttgctgtgtctgtggcccattgtcaaaagctttctctcagtcaataaagtcaatcgagagagaaagattgtatctccgattcttatggcttttta  12327500                            <---------ANAC55(1)                            <---------ANAC46                            <---------ANAC58                            <---------bZIP60(2)                            <---------ANAC58                           <------NtERF2                         --------->ALFIN1                         ----------->HVH21                        <-------MYC2                        ------->MYC3                        ------->MYC2                        <-------MYC3                        <-------PIF5                        ------->MYC4                        <-------MYC4                       --------->O2<---------AHL20(2)                       <---------PIF3(3)                       <---------O2<---------YAB1                       --------->PIF3(3)                       <---------bZIP60(2)                       --------->ANAC46                       --------->TGA1a      --------->ANAC55(2)                       <---------TGA1a <---------------AtSPL8                   ----------------->PIF3(1)<---------ANAC55(2)                 --------->WRKY12 <-----------TBP ----AHL20(2)    --------->WRKY38(1) <------------CBF              ---------->DOF2      ----------->GT1 -DOF2 <------ZmHOX2a(2)------->PIF5--------->ATHB12     <---------ANAC46     >>>>>>>>>>>>>>>>>LFY ================================bZIP_DOF  <-------TEIL --------->LBD16      ---------->ID1--------->AHL20(2)   atgtctgagatcagacacgatgaccacgtggcgtgtttttattggtacgtagttgaaccgcgtataaacaaaagtatttgtcccattggaagataaatta  12327600                                                    --------->ANAC58             --------->At4g35610                    --------->ANAC58                                -         <---------ARR11(3)                         --------->ANAC46                               --         <---------ARR14(2)                     --------->YAB1                                    ---         --------->ARR11(3)                    <---------ATHB12                                <-----         --------->ARR14(2)                <---------ATHB12                                  --------        --------->GLK1(1)                --------->WOX13(1)      --------->TOE2(3)          ---------        <---------GLK1(1)    <-----------GT1 --------->WOX13(1)  --------->YAB1     <---------TOE2(3)   gtggatgtggaaatcttctgcatattagttgtttccacttctccaatcaatcacacggctaattcaatgttaatcttttgcaatttgagattgaaaaagg  12327700                                           --------->SPL7                                        <---------ANAC58                                          <--                                        <---------ANAC55(2)                                       ---                                        <---------ANAC46 --------->ANAC58                        <---      <-----------GT1                   --------->ANAC55(2)    --------->DAG2                   ----- ---------->GT1  <---------TOE1(3)      <---------ANAC55(1)   ---------->DOF2                   <---- ------->DAG2    <---------TOE2(3)      <---------ANAC58 <----------ID1                        ------ ------->DOF2  <---------MYB52(1) <---------ARR11(3)     --------->ANAC58                     <------ -----ID1     <----------DOF2     --------->ARR11(3)   ---------->DOF2                        ------- ->DAG2       ------>ZmHOX2a(1)  --------->YAB1      <---------YAB1              <---------WRKY18(1) ->DOF2<-----------GT1          <---------ATHB12   --------->YAB1  ---------->DOF2        --------->ARR11(3)   aaaagttattaacatcctttaggttacaaaatcaatgatattgcgtatgtcaactataaaagccaaaagtaaagcctcttgtttgaccagaaggtcatga  12327800                                             <------ZmHOX2a(2) -------ICU4               --------->HSFB2a(2) ------>ATHB12             =========================HOX2a_HOX2a ------YAB1                ==========================HOX2a_HOX2a ---->ARR11(3)             <---------HSFB2a(2)------>ZmHOX2a(2)                        <-----------GT1 -----ARR11(3)             --------->LBD16  --------->ARR14(2)             --------->ANAC58 --->YAB1            -------->P   ---------->DOF2 --------->ANAC46  <---------------AGL15 ---YAB1  <-------TEIL     ------>ZmHOX2a(1)<---------ARR14(2)      <----------DOF2 ----------->GT1 -->ICU4  ---------->DOF2----------->RAV1(2)------->TEIL----------->RAV1(1)--------->ANAC58   tcattgtatacatacagccaaactacctcctggaagaaaagacatggatcccaaacaacaacaatagcttcttttacaagaaccagtagtaactagtcac  12327900                                                                      <----------DOF2                                                                    ------>MYB83                                                                    ------>MYB46(1)                           <---------HSFB2a(2)                     <---------ALFIN1                           --------->HSFB2a(2)                  --------->PCF2                      <---------DAG2                           --------->GLK1(1)    ---------->DOF2   <----------DOF2                   ------>ZmHOX2a(1) --------->TOE2(3)  <---------At4g35610      <---------ICU4  <------ZmHOX2a(1)            ------>ZmHOX2a(1)   taatctaaaagagttaagtttcagcttttctggcaatggctccttgatcatttcaatcctgaaggagacccactttgtagcaagaccatgtcctctgttt  12328000  Previous    Next  AGI:  At4g23650.1    Description:  CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); calmodulin-dependent protein kinase/ kinase. similar to CPK34 (calcium-dependent protein kinase 34), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19360.1); similar to CPK33 (calcium-dependent protein kinase 33), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G50700.1); similar to CPK17 (calcium-dependent protein kinase 17), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G12180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65882.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61364.1 Range:  from: 12324768    to: 12327469    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g23660.1    Description:  ATPPT1 (ARABIDOPSIS THALIANA POLYPRENYLTRANSFERASE 1); 4-hydroxybenzoate nonaprenyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO42024.1); contains InterPro domain 4-hydroxybenzoate polyprenyl transferase; (InterPro:IPR006370); contains InterPro domain UbiA prenyltransferase; (InterPro:IPR000537) Range:  from: 12327704    to: 12331663    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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