Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------RVE1(1)                                                              <---------CCA1(1)                                                             <---------ARR11(3)                     <                                                       ----------->GT1                            ---                                             <---------At4g35610        <---------AHL20(2)    -------             <---------AHL20(2)        --------->AHL20(1)    --------->ARR11(3)      <---------AHL20(2)    --------->DAG2                     <---------AHL20(2)    <---------AHL20(1)   --------------->AGL15   ---------->DOF2   <---------YAB1    --------->AHL20(2)  ----------->ARR10      <---------------AGL15 -->AHL20(2)<---------AHL20(2)   --------->ANAC46   --------->YAB1--------->AHL20(2)<---------ATHB12- ---AHL20(2)--------->AHL20(2) --------->ZAT6--------->At4g35610  <---------AHL20(2)--------->AHL20(2)   aatcgaaaagctaattttatactaatattgtttacactaaattttttagctcaaaaatagtaagatatttttatatttttgtgccaataaatagtaagac  12313600                                       <------MYB46(1)                                       <------MYB83                                       ----------->GT1                                      <---------AtMYB61                               --------->MYB52(1)                             --------->MYB46(3)    --------->TOE2(3)      ------>NtERF2      <---------TOE1(3)   ----------->GT1        --------->DEAR3(1)  <---------TOE2(3) --------->CCA1(2)        <---------ETT(1)<----------DOF2 ---------ARR11(3)--------->O2--------->AtMYB61 <------ZmHOX2a(1)      <---------AHL20(2)          -- -------->ARR10   <---------ANAC58  --------->ARR14(2)               <---------AHL20(2)     <-------- -->ZAT6          --------->ANAC55(2)<---------WOX13(1)     ----------->GT1           --------->ARR14(2) -------->ARR14(2)<---------ANAC58  <---------ARR14(2)   <---------ANAC46<---------AHL20(2) <--------   tagatatgttaattttgtctacgtgtctccgaccatcggattggttttaaggaaatgttatgtggtaacatatattttttttcccacaaatttgctttat  12313700                                                                                    --------->YAB1                                                 <----------DOF2                   <---------ATHB12                                                 <---------------AGL15           --------->WOX13(1)                                                 --------------->AGL15    <---------DAG2                                           --------->ARR14(2)             <----------DOF2             --------->CCA1(2)          --------->YAB1               --------->ARR14(1)            --------->ARR11(1)          --------->AHL20(2)           --------->CCA1(2)  --------->YAB1                       <---------ATHB12             <---------ARR11(3) <---------ATHB12                <---------ARR14(2)                 --------->ARR11(1) ------->WOX13(1)   --------->YAB1   --------->WOX13(1)             <---------ARR14(2) -DAG2      <---------ARR11(3)   --------->ARR14(2)                 --------->ARR14(2) --DOF2 ---------->DOF2         <------ZmHOX2a(1)<---------DAG2     --------->ARR11(3)   ccaatcacatcaaagatttgaatcaaaaattagaggattcaatcaaatttgctttatatgaaaaatagaagatttgctttatccaatcatatcaaatatt  12313800                                              --------->YAB1                                             <---------ATHB12                                            ------>MYB83                                            ------>MYB46(1)      --------->CCA1(2)                                           --------->WOX13(1)   --------->ARR14(2)                      <----------DOF2--------->YAB1             <---------ARR14(2)                --------->ARR14(2) ------>MYB46(1)    --------->ICU4                            <----            <-------TEIL           ------>MYB83  --------->TOE2(3)<-------TEIL                <------           --------->CCA1(2)      --------->WOX13(1) <---------TOE2(3)                        <------ --------->ATHB12     <---------DAG2<---------ATHB12---------->DOF2<-----------GT1         <---------ALFIN1   aaacgattagaagattcaaatttgctttataaacaccaatcagaccaatcacattaaagattagaagattcacaatactaaaatcaactcatcccacttt  12313900                                --------->AHL20(2)                                <---------AHL20(2)                          ------->GAMYB                                                    --------->ARR11(3)                      <---------WRKY12                                         --------->ANAC58                      <---------WRKY45                                         --------->ANAC58                      <---------WRKY38(1)                                      --------->ANAC46                     <<<<<<<<<WRKY6                                          --------->MYB52(1)<-----                     --------->WRKY18(1)                         --------->ARR11(3)        <---------AHL20(1) -------GT1        --------->YAB1      --------->HSFB2a(2)       <---------ARR11(3)    ------>ZmHOX2a(1) ----DOF2        <<<<<<<<<<<<WRKY18    <---------HSFB2a(2)      <---------CCA1(2) --------->GLK1(1) ---DAG2    --------->ANAC46   --------->AHL20(2)             --------->AHL20(2)  <---------GLK1(1)   acattcccttgtccaagtcaatagtcaaccctatttattttctaggcaaacgcgttcttgaaaattatatctccactacaaacgaaatcctaatatatac  12314000                         <---------ARR11(3)                                                <---------At4g35610                         --------->ARR11(3)                                   --------->ANAC58                        <---------CCA1(2)                                  <------ZmHOX2a(2)      <--                    --------->AHL20(2)                  --------->ICU4    --------->ARR11(3)      <--             --------->TOE2(3)                     --------->ANAC58      <------ZmHOX2a(1) --------->At4g35610            ----------->GT1         ---------->DOF2--------->ANAC58 <---------TOE2(3)   <---------MYB52(1)    <-----------GT1<---------ICU4  *TSS         <---------At4g35610--------->MYB52(1)  <----------DOF2 --TEIL   <------------CBF     ---------->DOF2  --------->ZAT2<---------YAB1  --------->ANAC58 <-----   atatttctactatattgttaatttttatatctccaaagtaaagaaaatggagctagccatgagtaagattaacgaggatcaagctaagcctttagctcca  12314100                       ------>MYB83                       -------->P                       ------>MYB46(1)                       --------->MYB52(1)             <---------MYB59                     --------->AtMYB61            --------->ANAC58                     --------->MYB46(3)           --------->ANAC46                     <---------MYB111(1)          --------->ANAC58                     <---------MYB55(2)           --------->MYB46(3)                     <---------MYB111(2)        <---------ALFIN1           --------->HSFB2a(2)               --------->AtMYB61  <-------TEIL         --------->MYB52(1)                --------->SPL7     --------->ARR14(2)         -------->P <---------MYB52(2) --------------->AtSPL8 <---------ARR14(2)  ------>MYB83     --------->ZAT6 --------->MYB46(3) --------------->AtSPL3------>MYB46(1)      ------>MYB46(1) --------DOF2   --------->DEAR3(2)    <------ZmHOX2a(2)      ------>MYB83       --------->AtMYB61 <-- -------DAG2--------->ANAC46         --------->ARR11(3) ------>MYB46(1)--------->AtLEC2      <------- ----ALFIN1<---------HSFB2a(2)       <---------ARR11(3) ------>MYB83<-------TEIL<---------MYB59 <----   ctttttctcactacccgaagcgaccaaccagacgaagaagatcagtaccaccacgaccgaaccaaatacgtccattcacagaccaaactcatcttatgtt  12314200                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                                                                                            <--------                                                       <---------ALFIN1                  <-----------HVH21 -------AtMYB61          ---------->CDC5               --------->MYB52(1)               --------->DEAR3(1) ----RAV1(1) --------->TOE2(3)                <---------ZAT18                      --------->AtMYB61- -----ANAC46 <----------DOF2    <-----------HVH21     ----------->HVH21         <---------ALFIN1   <-   gtggtttcatcgcatctttaactatgctcatcgcagtcaccttcatcgtgctctccctcacggttttccatctccatagcccaaacctcaccgtcgattc  12314300            ------>MYB83            ------>MYB46(1)           --------->MYB52(1)          ------->GAMYB         <---------MYB55(2)                 --------->ANAC46         <---------MYB52(2)            <---------WRKY38(1)         --------->MYB46(3)        --------->DAG2        --------->ANAC46          ---------->DOF2                                                  <- ---------ARR14(2)              --------->At5g28300                                               <-- ---------ARR11(3)             ------->GAMYB--------->ANAC58                                    ----- ---------ARR11(1)             ----------->GT1            --------->ZAT14               --------->YAB1 -------->ARR14(2)          --------->MYB52(1)            <---------ZAT14         <---------ANAC55(2) -DEAR3(2)--------->AtMYB61 <---------DOF5.7(2)       --------->ZAT6              --------->ANAC55(2) -------->ARR11(3)         <---------WRKY38(1) ------->TEIL                  ----------->GT1  <------ --------CCA1(2)           <---------WRKY12 --------->ANAC58            <---------GLK1(1) ------>ZmHOX2a(1)   catatctttcaaccaacggttcgattttgtcaacggtaaagtcaacacgaaccaaaacactacagtctcagtcgaaatctcgttacataatcctaatccg  12314400                                                         <------MYB83                                                         <------MYB46(1)                                  <---------At5g28300  <--------P                                 <-----------GT1     <---------MYB46(3)                           ---                            <---------ANAC58         --------->MYB111(2)                          ---                            <---------ANAC58         --------->MYB55(2)                          <---                            <---------ANAC46      <---------MYB46(3)                     ------>NtERF2                      <---------TOE1(3)          <---------AtMYB61                       --------->LBD16   <---------ANAC46   <---------TOE2(3)          --------->ALFIN1                       <---------RAP2.6(2) ------GAMYB         <---------DOF5.7(2)      <---------AtMYB61                         <---------ANAC46 -------ANAC46     --------->DOF5.7(2)  --------->At5g28300     --------->ICU4         --------->RAP2.6(3) ---->LBD16       --------->TOE2(3)    ----------->GT1<-------GAMYB                    <---------LBD16 ---LBD16         --------->TOE1(3)  <---------LBD16<---------AtMYB61      ----------->GT1    -------   gcgttgtttatagtgaagaacgttaatgtttcgttttaccacggtgaattggtggtggttggagaaagtattagaagaagtgaaactattccggctaaac  12314500  Previous    Next  AGI:  At4g23610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39657.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73280.1) Range:  from: 12314035    to: 12314839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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