Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->LBD16            <---------AHL20(2)                           --------->ANAC55(2)           --------->AHL20(2)                            <---------ANAC55(2)        <----------DOF2                           <---------ANAC58               <---------TOE2(3) --------------AtSPL3                             <---------AtLEC2<---------ANAC58       --------->YAB1 --------------AtSPL8                             <---------ANAC58<---------ANAC58----------->GT1 ------------->AtSPL8    ---------->CDC5     <---------ICU4<---------MYB52(1)    <---------TOE1(3) ---->CCA1(2)      <---------ANAC58      --------->ZAT6 ------>ZmHOX2a(2)   <---------AHL20(2) --------AGL3      <---------ANAC58     <---------TOE2(3)----------->GT1    --------->AHL20(2)      <   atgggtacctctttttaatagacgtgctcagggcataagattaagactaattgcatgatccgtaatttgcgttcttaattaataaggtttatcatcttgc  12306700                               --------->AHL20(2)                               <---------AHL20(2)                              --------->AHL20(1)     ------>ZmHOX2a(2)        <---------AHL20(1)     <---------MYB59      <---------AHL20(2)    <------ZmHOX2a(2)     --------->AHL20(2)   <---------AGP1        <---------AHL20(2)   --------->ARR11(3)    --------->AHL20(2)                                                         -   --------->AGP1        <---------AHL20(1)                       <---------ZAT6                   <-   <---------ARR14(2)--------->AHL20(2)                   --------->ATHB51            <---------TOE1(1)   <---------ARR11(3)<---------AHL20(2)  <---------YAB1  --------->ICU4               <---------TOE2(1) <-------TEIL--------->ICU4   --------->AHL20(2)         <---------YAB1 ---------->DOF2  ----------->GT1 --------P   <---------YAB1   <---------AHL20(2)      ------->TEIL----------->GT1<---------------AtSPL8   aggtagatctaactcatgagtatataatttaatttatttgctcaagattgaacatgaacattattgtggtgttacaaagagagatagtacgaggtaaaac  12306800                                                        --------->CCA1(2)                                                        <------ZmHOX2a(2)                                               --------->ATHB51                                              <---------AHL20(2)                                              <---------YAB1       ---------->DOF2                  -                                          ----------->GT1     --------->YAB1                      ---                                       -------->P      <---------ARR14(2)                         <--     ---------->DOF2                   ------>MYB46(1) <---------ARR11(3)                 ------->GAMYB -------->YAB1                         ------>MYB83    --------->ARR14(2)                --------->MYB46(3) --------YAB1                     <-----------GT1      --------->ARR11(3)      ------>ZmHOX2a(2)  ---   tatcatagaaagtgattcaagtttcttagggactataaaccaacttgtataattgaagatccaaatataaaaaggctctgatccaatttcaacagtcaaa  12306900                                                                              --------------->AGL15                                    <-----------ARR10                  ------->MYC2                                    <---------ARR11(1)                 <-------MYC2                                    <---------ARR14(2)                 <-------MYC3                                    --------->ARR14(2)                 ------->MYC3                                    ------->TEIL                     <---------TOE1(2)                                   <---------CCA1(2)                <---------ALFIN1       <---------YAB1              <---------ARR14(1)              --------->TOE1(2)     --------->YAB1            --------->MYB52(1)                  --------->TOE2(2)    <---------YAB1        --------->WRKY38(1)                   <---------GLK1(1)               <---- -------->TOE2(3)         --------->WRKY12                      --------->GLK1(1)              ------ ------>ARR11(3)       <---------ANAC46                        <---------ARR14(2)          <---------HSFB2a(2) -------ARR11(3)      <---------TOE2(3)                        --------->ARR14(2)          --------->HSFB2a(2) ------>GLK1(2)       <---------TOE1(2)   --------->ANAC55(2) <------ZmHOX2a(1)  --------->REM1(2)---   aatcttattataaatggaccatcttacgttgacaaacgtatcttatgtgatcaccttgataagaggaaacccacgttctaccatgtagggtttcgagata  12307000                                                     ------->MYC2                                                     <-------MYC2                                                     ------->PIF5                                                     <-------PIF5                                                     <-------MYC3                                                    --------->TGA1a                                                    <---------TGA1a                                                    <---------O2                                                    =================================================                                                    --------->O2                                                    <---------ANAC55(2)                                                -------->P                                            <---------ICU4      <-----------GT1                    --------->YAB1    <---------ICU4                      <---------AHL20(2)  <---------TOE2(3)                <---------AHL20(2)------->MYC3 --------->AHL20(2)               --------->YAB1==============MYC_MYB --------->YAB1                   --------->AHL20(2)--------->ANAC46    ----------->TBP ---TEIL      ================================================bZIP_DOF --------->AHL20(2)     <------ --->CCA1(2)  <----------DOF2    <---------YAB1<-----------GT1    <---------ATHB12         <--------- ------>TOE2(3)     <---------CCA1(2)  --------->AHL20(2)         ------------>CBF----------->GT1  --   cattaatatttccattcttttcttatctcgatactattatatataatacttaccacgtgaaatatcaaatcaatataaaaaaaaacgtagaaacttttac  12307100                                               --------->At4g35610                                 --------->ANAC58                         <--------P                                 --------->ANAC55(2)                      <---------MYB52(1)                                 --------->ANAC46                       <------MYB46(1)                                 --------->ANAC55(1)                    <---------MYB46(3)                                 <---------ANAC55(2)     <---------AHL20(2) --------->MYB52(2)                        --------->At5g28300  --------->YAB1          ------------>MYB.PH3(2) <---------AHL20(2)    ----------->GT1       <---------ICU4--------->YAB1<-------GAMYB =bZIP_DOF            ----------->GT1       <---------ATHB12   ---------->DOF2            <---------ZAT6 -----GT1          --------->ICU4--------->AtLEC2        --------->AHL20(2) --------->MYB59    <----- -DOF2             <---------ATHB12 *TSS  --------->WOX13(1)  --------->AHL20(2)    --------->ANAC58 --------->TBP ------------>CBF  --------->ANAC58       --------->YAB1  <------MYB83--------->ANAC58   tatataatctcactagtagcaatgagggtaaaatcacgcaaaaacaatcatctctctataaaaataaaagaagttggttagttccaacgctagagttaag  12307200                                                                  --------->ANAC46                                                                  --------->ANAC58                                                             <------NtERF2                                                             ------>NtERF2                                                             <---------ATERF1(1)                                <---------ZAT14             --------->DEAR3(1)                                --------->ZAT14             --------->RAP2.6(2)                              --------->At4g35610       --------->DAG2                  <---------ANAC46                     ---------->DOF2                  <---------ANAC58                    ---------->DOF2                  <---------ANAC58                  <---------RAP2.6(3)       --------->ANAC58 <---------WOX13(1)         --------->RAP2.6(2)                        -------       --------->ANAC58<---------ARR14(2)        --------->At4g35610                          <------     <---------ANAC58  --------->ARR14(2)        ------>NtERF2    --------->ANAC58           --------     <---------ANAC58----------->ARR10       <---------REM1(1)<------NtERF2               --------->HSFB2a(2) ----TOE2(3)     <-------TEIL <---------At4g35610<---------At4g35610                    --------->At4g35610   aaatatggctagccaaggatgcgtagattggcagttcagtggcagtgatgcagccgaaaaggccgcccaagcctccctaggcacttactcttctgaaatc  12307300                                                                                    <-------GAMYB                                                                                   <---------MYB46(3)                                                                           ---------->DOF2                                                                       --------->DEAR3(1)                                                                      --------->RAP2.3(1)                                                                     ------>NtERF2<---------MYB55(1)                                                                    --------->DEAR3(1)  <---------TOE1(3)                                                                  --------->SPL7  <--------P                                                                 <---------ALFIN1<-------GAMYB                                                             ------>MYB46(1)    <---------MYB46(3)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                ------>MYB83 ---------->DOF2        ----------->HVH21                                   --------->ANAC46   <---------DEAR3(1)---- -->ARR11(3)        ---------->DOF2                         --------->ANAC58   <---------RAP2.6(2)  < ---ARR11(3)     --------->ANAC58                           --------->ANAC58--------->DAG2       <--- ->GLK1(1)       --------->ANAC58  ------>NtERF2      <------NtERF2--------->DEAR3(2)   <---------TOE2(3)   ttcagtctgtgtgaccctcaaggaaagcctattttgcctccactaagtgaagaggcagagaccagccataccgccgaaaaggcggttgttaaggctgtcc  12307400             --------->ANAC58          <---------ARR14(2)          --------->ARR14(2)       <---------HSFB2a(2)      <---------ANAC55(2)      <---------ANAC46                             ----------->GT1                            -------     --------->SPL7                             --------->MYB52(1)                           --------   <---------SPL7                         <--------P--------->At5g28300                    --------->ARR14(2) <---------------AtSPL3                  <---------MYB52(1)           --------->DAG2       <---------ARR14(2) --------------->AtSPL3                  <-------GAMYB               ---------->DOF2      --------->GLK1(1) -->ZmHOX2a(1)                          --------->LBD16      <-------TEIL                 <---------GLK1(1) ---------LBD16                        --------->LBD16   --------->ARR11(3)        <-----------HVH21 -------DOF2 --------->ANAC58         <---------LBD16    <---------AHL20(1)     ----------------->AGL1   tttgcggtacgggaaacgcctatgctccaagtattggcctcccggttgccaaacggtaatatatacataaataaagttaatgtccagtcagggtatccat  12307500                                                                                            ------->TEIL                                                               ------>ZmHOX2a(2)         <---------ANAC55(1)                                                 --------->ARR11(3)                      <---------ANAC46                                                 <---------ARR11(3)                      <---------ANAC58                                            --------->LBD16   <------ZmHOX2a(2)          <---------ANAC58                                           <---------ANAC46  <---------ARR11(3)          ----------->GT1                                          <---------LBD16    --------->ARR11(3)          <---------ANAC55(2)                                        --------->ALFIN1     --------->AGP1             ----------->STF1                                        <---------DEAR3(1)   --------->ARR14(3)        <---------TGA2(2)                                      <---------ANAC46       <---------ARR14(3)       ----------->HVH21                                      <---------bZIP60(2)    <---------ARR14(2)       ----------->TGA1           --------->ZAT6             <-----------RAV1(1)    --------->ARR14(2)     ----------->bZIP910(2)         <-----------GT1            --------->ZAT14         --------->GLK1(1)       <---------At4g35610    ------->TEIL                    <---------ZAT14>>>>>>>>>RAP2.2                  --------->At4g35610 -------->AGL15                 <---------ICU4   <-----------ARR10        --------->At4g35610 --------->AGL3                <---------YAB1<------NtERF2 ----------->ARR10 --------->MYB52(1)   attttgcatcttaactctacgcttgtatatatgatcagtgctgtggcggaatatctaaaccgagatcttgacaataagctaacgggagatgacgtatata  12307600  Previous    Next  AGI:  At4g23590.1    Description:  aminotransferase class I and II family protein. similar to CORI3 (CORONATINE INDUCED 1, JASMONIC ACID RESPONSIVE 2), transaminase [Arabidopsis thaliana] (TAIR:AT4G23600.1); similar to cystine lyase BOCL-3 [Brassica oleracea] (GB:AAO27362.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPr Range:  from: 12307136    to: 12309657    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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