Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->AHL20(2)                                                <---------AHL20(2)                                <--                                                <---------AHL20(1)                             <-----                                         --------->ZAT6                                        ------                            <---------ALFIN1   --------->AHL20(2)                   ------->TEIL  ---               <---------AHL20(2)     ----------->HVH21                            <---------CCA1(2)              --------->AHL20(2)    --------->O2--------->AHL20(1)       <---------ALFIN1      <-----    <---------YAB1         --------->ANAC46  --------->YAB1         <---------ARR14(2)       <------- --->DOF2     <---------AHL20(2)  <---------ALFIN1                  --------->ARR14(2)XXXXXXXXXXXXXXX   gttgatatgatactatttaaattgacttcaccacatccacttgacactaataaattgacttctccatccctatccacacatatttgaatcttccaataag  12299400      --------->ARR14(2)      <---------ARR14(2)   --------->ANAC46   --------->ANAC58   --------->ANAC58  --------->LBD16                                            <---------AHL20(2) -------ARR14(2)                                         --------->YAB1                            <- ----TOE2(3)                                            <---------ATHB12                           -- --->DAG2                                         ----------->GT1      --------->ARR14(2)          -- ------>ARR14(2)        <---------AHL20(1)     <----------DOF2    <-----------HVH21             ----- ----TOE1(3)            --------->AHL20(1)  <---------ALFIN1--------->AHL20(2)               -------- --ATHB12               <---------ARR11(3) ----------------->AGL1----------->GT1 <---------AHL20(2)<- XXXXX>MIR2938 <------ZmHOX2a(1)<---------TOE2(3) <---------MYB46(3)   <---------ARR14(2)   ------>ZmHOX2a(2)   gttccacgaaactgctaggaaaacaatattttctaaggcaatagtcccactttggttaatcataaaattgtcaaatccactatgtaatttgtgatccata  12299500     <-----------GT1   --------->AHL20(2) --------AHL20(2)                             --------->HSFB2a(2) ------->AHL20(2)                             <---------HSFB2a(2) ------->AHL20(1)                        <-----------GT1 ---->YAB1      --------->YAB1         <---------AHL20(2) ->TOE2(3) <---------MYB52(1)         --------->YAB1            <-------TEIL          ----------->GT1 --------AHL20(1)         <-----------HVH21--------->ZAT6  ---------->DOF2          --------->ZAT14   ataaattaaaccagttattcatcatctaagtcagacactattttaactctagaaaacttgacaaagtacatgaaatgtttttgaagtgaagtaacaaaat  12299600                     <---------AHL20(2)                   <---------AHL20(2)                 <---------AHL20(2)          --------->ZAT6                <---------AHL20(1)      --------->AHL20(1)                --------->YAB1                --------->AHL20(1)      <---------ARR11(3)                --------->AHL20(2)              <---------AHL20(1)        --------->ARR11(3)          --------->TOE2(3)           <----              --------->AHL20(1)       --------->AHL20(2)        <<<<<<<<<<GT-3b <---------CCA1(2)  -             --------->AHL20(2)  --------->ANAC46      --------->AtMYB61  <---------ICU4        -----   tccaacatgtacaaaatatatatttttttttttaaacgaaaatatatacactagagacctcacctatttttcttaataatatcaaatctcacatatttga  12299700                                                                                                 <---                                                                                           <---------                                                                                          -------->ATHB1                <---------AHL20(2)                                                        --------->ATHB51            <---------AHL20(2)                                                            --------->ATHB12            --------->AHL20(1)                                                            <---------ICU4            --------->AHL20(2)       <---------AHL20(2)                                  <---------ATHB51            <---------AHL20(1)  <---------ARR11(3)                                       --------->ICU4           <---------AHL20(2)   --------->AHL20(2)                                       <---------AHL20(2)           --------->AHL20(2)   --------->AHL20(1)                                   --------->AHL20(2)     --------->ANAC46           --------->ARR11(3)                                   <---------AHL20(2)   --------->ANAC58             <---------AHL20(2)                               --------->AHL20(2)   --------->ANAC58             <---------AHL20(1)                              <---------ARR11(3)   --------->ANAC46        --------->AHL20(2)                    ----------->GT1<---------AHL20(1) -----------AtSPL8 --------->HSFB2a(2)                      <----------DOF2     --------->AHL20(1) -------->ZAT14--------->AHL20(2)  <---------AHL20(2)<------ZmHOX2a(1)          --------->ARR11(3)<-- ---------->AtSPL8 <---------HSFB2a(2)<---------YAB1----------->GT1       ----------->GT1--------->AHL20(2)   tgtacacacaaaattaaatttatagaaaatgaaatatattattttagaaaaataaggagaaactttgtggaaaaaatagaaaaatatttaaattattgtt  12299800       <---------AHL20(2)       --------->AHL20(2)       --------->AHL20(1)                                            --------->HSFB2a(2)      --------->AHL20(2)                                             <---------HSFB2a(2)  <---------AHL20(2)                --------->LBD16               --------->GLK1(2)  --------->AHL20(2)          --------->At4g35610               --------->KAN4(1) --------TBP   <---------ANAC58  *TSS       --------->ANAC46    <---------KAN4(1) ---CBF<---------AHL20(1)     <---------At4g35610              <---------KAN4(2) -------YAB1   <---------ANAC58 ------->GAMYB            --------->TOE1(2) >>>>>>>>>TBF1           <-   tttataaattttattttgggttcgaactcttcaactccctgaacacaagtcgcataaaacgaaggaacaatctagaagaagaacgataacatccaatctc  12299900                                  <---------MYB52(2)                             <---------ANAC55(2)                             ----------->GT1                                             --------->At4g35610                             --------->ANAC55(2)                                         <---------At4g35610                           --------->ICU4                                         <----------DOF2   <              <-----------------AGL1                                       <------------------------ANAC81     <-----------GT1       <---------ATHB12                          <---------YAB1   <---------MYB52(1) ---------DOF2>>>>>>>>>>>>>>>>>LFY--------->MYB46(3)               --------------------->WRI1   -----   tctttatattccttccttccattgtggcaataagtaacaaaccttgccctctacttcattccctccttgttttgatttcatcgtctttgttagctctcct  12300000                                 <---------ANAC58                                         -----------                                 <---------ANAC58          <---------ANAC58              <---------ANAC58                                --------->ZAT2             <---------ANAC46              <---------ANAC58                                --------->At4g35610     <----------DOF2                  <---------ANAC46                              <------ZmHOX2a(1) ---------->DOF2                        <<<<<<<<<<WRKY63                         <---------ANAC46  --------->DAG2  <---------ANAC58           --------->WRKY38(1)                      <---------DEAR3(1)   <---------TOE2(3)                        <---------At4g35610 ---------MYB52(1)<---------ATHB12   <---------ANAC46  <---------ANAC58             <-------GAMYB ->ZmHOX2a(1)   --------->WOX13(1)  <---------At4g35610<---------ANAC58      <-----------RAV1(1)   --   ctgtttttttttcttagtcaatcgatggcgaaggagcttgctgataaggctaaagaggctttcgtagacgatgacttcgatgttgctgttgacttgtact  12300100                                <---------ARR11(3)                                --------->ARR11(3)                              ----------->ARR10                           <----------CDC5                          --------->At4g35610                         <---------ANAC46                    <---------ICU4                   ================================HOX2a_HOX2a                   ------>ZmHOX2a(1)                   <---------YAB1                <------ZmHOX2a(2)          <---------ANAC46<---------At4g35610                                            <----------DOF2       --------->WRKY12 --------->ZAT18                                             <---------HSFC1(2) --------->ANAC58 <---------MYB59                                                   --------->HSFC1(2) --------->ANAC58------>ZmHOX2a(2)          ------>ZmHOX2a(2)                     <--------P      <-- ---->AtSPL8   --------->ARR14(2)       ----------->HVH21                        <---------MYB52(1) -------->DOF2 <---------ARR14(2)     <---------At4g35610            ---------->DOF2<---------At4g35610   ccaaagccattgacttggatcctaattgcgctgagttcttcgctgatcgtgctcaggcctatatcaaactcgaaagcttcactggtagcttctttgttct  12300200                               <-----------RAV1(1)                             ----------->RAV1(2)                         ------>NtERF2                        --------->ANAC58                  <---------ANAC58                  <---------bZIP60(2)                  <---------ANAC46                                           --------->At4g35610                  <---------ANAC58                                           <---------At4g35610               <-----------RAV1(1)  <---------ARR14(2)                   <---------ICU4               ==========================RAV                             --------->YAB1             <---------At5g28300--------->LBD16                         <---------YAB1         <----------DOF2--------->ANAC58                       <---------ANAC58              <-------       ---------->ID1 <---------ATERF1(1)                      <---------ANAC58       <---------MYB46(3) -------MYB52(1)<-----------HVH21   --------->ARR14(2)      <---------MYB52(1)   ---------->DOF2   gttatcttcgtcttttactgtcgtggacgccttctggggttctgggtttttgtatgttttcggtttcttacttcatcatagctgaaagttgttgactttg  12300300  Previous    Next  AGI:  At4g23570.1    Description:  SGT1A (Suppressor of G2 (Two) 1A); protein binding. similar to SGT1B (enhanced downy mildew 1b), protein binding [Arabidopsis thaliana] (TAIR:AT4G11260.1); similar to SGT1-like protein [Brassica oleracea] (GB:CAF06580.1); contains InterPro domain SGS (InterPro:IPR007699); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain CS (InterPro:IPR007052); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 12299833    to: 12302729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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