Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->SPL7                 <---------SPL7                                                                  ----               <---------------AtSPL3                                                           <----               --------------->AtSPL3                                                          ------               --------------->AtSPL8                                                          <-----         --------->AHL20(2)                                             <---------ANAC58     --------         <---------AHL20(2)                                             <---------ANAC46   <---------ALFIN1        <---------AHL20(2)                                              <---------ANAC58--------->ANAC46        --------->AHL20(2)                  --------->ZAT6            --------->ZAT18   <---------ETT(1)   <---------MYB59--------->SPL1(1)  ------->TEIL    <---------------AtSPL8    <----------DOF2 <----- ->AHL20(2)   <---------At5g28300 <---------YAB1    ---------->DOF2 ------->PIF5 <---------AHL20(2) --AHL20(2)  <-----------GT1 <---------TOE2(3)  ----------->GT1     <-------PIF5 --------->AHL20(2)   tcggacctaaataaatcaccgtacgaatattagggtatgaatgtgaagactagtaaaagtactcactgcaagtgccttggtctttaatttccgacactgc  12275800                                                  --------->ANAC58                                                  --------->ANAC55(2)                                          <---------MYB46(3)                                         <---------ANAC46                                  <---------GLK1(1)                                  --------->GLK1(1)                                 <-----------ARR10<---------ANAC55(2)                                 --------->ARR11(3)                             --------->At4g35610  --------->ANAC58                             <---------ZAT2  --------->ALFIN1                  ----------->HVH21    --------->LBD16                  ------->GAMYB  --------->ARR14(2)                --------->At4g35610    ------>NtERF2                                                -        ------>NtERF2  <---------LBD16<---------DEAR3(1) ------>MYB83                              -- --->TEIL       ----------->RAV1(2)  <---------LBD16     ------>MYB46(1)                           <- -----ALFIN1    <---------At4g35610------>ZmHOX2a(2)   --------->TOE2(2)                          <-- --->ZAT14    <---------WRKY38(1)<---------ARR11(3)    --------->TOE1(2)                          --- ----ZAT18    --------->ZAT14<---------At4g35610<---------ANAC46                       <----------DOF2 ->ANAC46     <---------WRKY12   <---------ARR14(2)  ------->TEIL            <----------DOF2      <-- ----ZAT14    <---------ZAT14--------->ZAT2--------->ALFIN1              --------->GLK1(2)     <-----   accttcttgcctccagtcaactgactctgggagctgatctccggcgagtggcacgtacctacgactggttttgagattcctttgtttcggtttagggctt  12275900        --------->ARR11(3)        <---------ARR11(3)          <---------At4g35610      --------->DAG2                --------->At4g35610    ---------->DOF2            <------MYB46(1)                               --------------------->WRI1 -------->LBD16                <------MYB83                                 <---------AtLEC2 ------->LBD16                --------->MYB46(2)            <--------P  <----------DOF2 --------LBD16                ----------->ARR10        --------->ZAT2  --------->MYB52(2) -------HSFB2a(2)             --------->MYB59          <---------ZAT2 <-------TEIL<---------At4g35610 ------>HSFB2a(2)             <---------AtMYB61       ------>MYB46(1)<-----------ARR10 -------LBD16               <---------MYB52(1)        ------>MYB83   --------->GLK1(2) -----DOF2                 <-----------HVH21 <-----------HVH21       <---------ARR14(2)       -------   ccagggaaaaggtctcggtactcttgaacggttaggtctgcaaaccgagtcaaaccaagctggtaagagaggttctttgcattgtgctggtcgatgaaac  12276000                                                                             --------------->AGL15                                                                             <---------------AGL15                                                                            ----------------->AGL2                                                                            ----------------->AGL1                                                                            <-----------------AGL1                                                                            <-----------------AG                                                                            ----------------->AGL3                                                                            <-----------------AGL2                                                                            <-----------------AGL3                                                                   <---------ANAC46                                                                   <---------ANAC58                            <---------MYB52(1)                     <---------ANAC58                       --------->ANAC46                           <---------ZAT2                 --------->HSFB2a(2)                              --------->ZAT2                    -                 <---------HSFB2a(2)    --------->LBD16         --------->LBD16                     -        ------>ZmHOX2a(1)   <---------ARR14(2)                 <---------ANAC58               ------- -->MYB52(1)  <---------ARR14(2)        --------->HSFB2a(2)    <---------ANAC58     ----------->GT1--   ggagattgtccttgaagttctgaaaacgccgttccttctctccgagagcattggtataagtcttcccgtgcttggacatccacatttggaaaataaactc  12276100                                                                     --------->MYB52(1)                                                               --------->DEAR3(1)                                                               --------->RAP2.3(3)                                                              --------->RAP2.3(1)                                                              <------NtERF2                                                              --------->ATERF1(1)                                                             ------>NtERF2                                                             <---------ATERF1(1)                                                             <---------RAP2.3(1)                                                            <---------DEAR3(1)                                                            --------->DEAR3(1)                                     <------NtERF2         <---------ABI4(2)                                   <---------ANAC58        --------->RAP2.3(1)                                   <---------ANAC58        <------NtERF2                                --------->ALFIN1           --------->ATERF1(1)                                ----------->HVH21         <---------ATERF1(1)                              --------->ALFIN1            <---------ORA47(2)                              <-----------RAV1(1)         <---------RAP2.3(1)                         <---------LBD16 <------MYB46(1)  <---------DEAR4(2)                        --------->MYB52(1)               <---------RAP2.3(3)                       <---------ALFIN1<--------P        <---------RAP2.3(2)                       --------->AtMYB61 <------MYB83    <---------DEAR3(1)               <-------GAMYB <---------ARR14(2)         --------->RAP2.6(3)                   -------               <---------MYB52(1) <---------LBD16       <---------ORA47(1)                    <------    ------>ZmHOX2a(1) --------->MYB46(3)<---------AtMYB61<---------RRTF1(3)            ---------->DOF2 ------>GAMYB --------->LBD16--------->ARR14(2)        <------ZmHOX2a(1)           ---------->DOF2 -------->AtMYB61  ----------->HVH21--------->LBD16   ----------->HVH21          --------->YAB1 -->ANAC46  <---------LBD16--------->LBD16  <-------TEIL--------->SPL7          <<<<<<<<<ARR2<------ZmHOX2a(1) ------->MYB46(3)<---------MYB46(3)<---------ANAC46 <------NtERF2---------->DOF2<---------ATHB12   aacctcctcgttgctccggttgtgaccaccggatgtggcgggaaggtccatggccgaggacggcgccgaaagaacgaatacaatcaaaagaaagaggatt  12276200 --------->ANAC58 --------->AtLEC2                                              <------------CBF --------->ANAC58                                       <------------CBF                   <--------- -->ARR14(2)                                          --------->ARR11(3)            --------->ATHB12 ---ARR14(2)     ---------->DOF2 --------->KAN4(2)    <---------ARR11(3)       <---------ATHB12 -----   gtcatgcaaacaggtctaacaaagcccattttgtatattcttcttagtgactatgagatattgcaaattggtccgaaacaaatgaatgatgggttttatc  12276300                                                                                      ------->TEIL                                                                                  <---------------AtSPL8                                                                                  <---------------AtSPL3                                                                                  --------------->AtSPL8                                                                               --------->AHL20(1)        <---------ANAC46                                                       <---------AHL20(1)        --------->ANAC55(2)                         <---------AHL20(2)         <---------ARR11(3)        <---------ANAC55(2)                        <---------AHL20(2)       --------------->AGL15        <---------ANAC58                    <---------YAB1                  <---------------AGL15        <---------ANAC58              <---------AHL20(2)            <---------At4g35610   --------->WOX13(1)                --------->AHL20(2)          ------>MYB46(1) <------------CBF ------------>CBF                    <---------AHL20(2)     <---------WRKY18(1)--------->ARR11(3)  -- -DOF2  <---------ANAC55(1)        ------->TEIL    --------->AHL20(2)      ----------------->AGL3  -- ---->YAB1                <-----------TBP   ------>ZmHOX2a(1)    ------>MYB83 <-----------TBP      <-   gtagccaattacgtgtgtttgtgtttggatatatatgaatttaatcctgatttttaaattcttgacctacagctacttctatatattgtacctattcgat  12276400                                                                              --------->AHL20(2)        <---------ARR11(3)                                                    <---------AHL20(2)        --------->GLK1(2)                                                    --------->AHL20(2)        --------->ARR11(3)                                             <---------ARR11(3)        <---------ARR14(2)                                             --------->ARR14(2)        --------->ARR14(2)                                             --------->GLK1(2)       <---------GLK1(2)     --------->YAB1               ---------->DOF2  <----------DOF2    --------->YAB1       <---------YAB1                ----------->TBP --------->ARR11(3) ------->AHL20(1)      <-----------GT1               <-----------TBP   <---------ARR14(2)  ---------- ------->ARR11(3)   <---------ICU4           <---------ATHB12     <---------TOE2(3) <-----------GT1 --------ARR11(3)  --------->ICU4        ------------>CBF<---------AHL20(2)------>ZmHOX2a(1)   atatattcagaatcttgagtcaaaattactattagaattcgttttcaatctttctatatataaagtttaagaaaatccttttaattttacaaggggaaac  12276500                                        --------->TOE2(3)                               <-----------RAV1(2)                            <-----------GT1                        <---------ARR11(3)                        <---------ARR14(2)    <-----------GT1                        <---------GLK1(2)<----------DOF2                        --------->ARR11(3)   <---------YAB1               <---------AHL20(2)     ------->TEIL          <---------ICU4               --------->AHL20(2)<---------ZAT2             --------->ATHB51              --------->AHL20(1) --------->At4g35610       <---------YAB1              <---------AHL20(1) --------->ZAT2         <---------YAB1            <-----------GT1              <---------AHL20(2) ----------->RAV1(2)    <---------TOE2(3)     <----------DOF2    ----              --------->AHL20(2) <---------At4g35610   <-----------GT1    <-----------GT1        ---- ->GT1---------->DOF2   --------->ARR14(2) <---------ICU4--------->YAB1  <-----------GT1      -------   ttggaaatgaaagaaatttatttggagattttcccagctgtacctttattactaaattaacataattgtctaaaattaccctttttactagattacacca  12276600                                                                            --------->AHL20(2)                                                                         --------->YAB1                                                                       <---------WOX13(1)                                                                     --------->ATHB12                            ----------->GT1                          <---------ICU4                   <---------ARR14(2)                                --------->ATHB51  <---------ICU4 -->MYB83          --------->ARR14(2)<------MYB83  ---------->DOF2  --------->ICU4    --------->ICU4 -->MYB46(1)      <------ZmHOX2a(1)  <------MYB46(1)              --------->YAB1 ----------->GT1 ---- -->ANAC46    ---------->DOF2<------ZmHOX2a(1)    <---------AHL20(2)<---------YAB1  --------->YAB1   aattttagacaatttcaaaaggatacttagaggaaaatttggtttagtctattaaaagagtaattgagtcataattgataatatagtaataagtatagat  12276700  Previous    Next  AGI:  At4g23520.1    Description:  cysteine proteinase, putative. similar to cysteine proteinase, putative / thiol protease, putative [Arabidopsis thaliana] (TAIR:AT5G43060.1); similar to cysteine protease [Hevea brasiliensis] (GB:ABG33750.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 12274467    to: 12276229    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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