Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------ANAC58                                        --------->TOE2(3)                             ----------->HVH21                                        <---------DAG2                          --------->ANAC58                                     <-----------GT1                            --------->ANAC46  ------>ZmHOX2a(1)                <---------ATHB12                             <---------ANAC55(2) -------ARR14(2)        <---------REM1(1)<----------DOF2   ------>ZmHOX2a(1)    --------->ANAC55(2) ------>ARR14(2)        <-----------RAV1(1)    <---------ANAC58                 --------->ANAC58 ------CCA1(2)       ----------->HVH21-------->P          --------->TOE2(3)    <---------LBD16    <-- --->YAB1          <---------At4g35610------->TEIL--------->SPL7              --------->MYB52(1) <--- ---ATHB12       <-----------GT1 ------>ZmHOX2a(1)------->TEIL        <------ZmHOX2a(1)        <-----   tatcctctgtttcaagtattgacctgatgttgctcctatcaacctttttgcgaacgtcttcctcagttttgaggagaacattacggaagtgaccagtctg  12270200                                                                  <---------ANAC58                                                      ============================HOX2a_HOX2a                                                      ------>ZmHOX2a(1)                                                    ------>ZmHOX2a(2)             <---------At4g35610                  --------->ARR11(3)             --------->At4g35610                  <---------ARR14(2)   --------->MYB52(1)                             --------->ARR14(2)  ----------->HVH21  <----------DOF2              <---------ARR11(3)               <---------STY1(2) -------YAB1 --------->ZAT2                       <---------GLK1(2)        ------>ZmHOX2a(2)        < ------GLK1(2) <----------DOF2                    --------->AGP1  <---------ANAC58 --------->STY1(2)< ----YAB1    <---------ZAT2         ---------->DOF2<------ZmHOX2a(2)     <---------ARR11(3)  --------   attcttgacggactcagctttcactttgtagaatattggaaagggaacaatagatcctgtctccatttgcttcttgatctcaactagctcgtctaagcac  12270300              <---------ANAC58                                              <---------WOX13(1)              <---------ANAC58                                            --------->ATHB12       <-----------RAV1(2)                <---------ANAC55(2)            <---------YAB1  ----------->HVH21                       --------->ANAC55(2)          <---------ANAC46 ---------ANAC58                    --------->ZAT18                  --------->ZAT14          ------- ---------ANAC58                    <---------ZAT18                  <---------ZAT14          ------- ->MYB46(3)<---------ZAT18--------->At4g35610                       --------->ALFIN1         --------   cagcgtgactcagggtacttgtctgagaagatgactagtgcgatacttgactctctgattcgttcgaagagtgttgtgattggcctccctctaatctcgt  12270400                                      <----------DOF2                            ------>ZmHOX2a(2)                           <---------GLK1(1)                           --------->GLK1(1)                          <---------ARR11(3)                          --------->ARR11(3)                <---------TOE2(3)       --------->LBD16                          --------->ARR14(2)          <---------ZAT18             ----------->RAV1(2)      --------->AtLEC2    <-----------ARR10           --------->ZAT18       <---------DAG2 -->TOE2(1)               <---------ARR14(2)        <---------At4g35610     <----------DOF2 -->TOE1(1)           <---------At4g35610   <----------DOF2 <---------TOE1(3)     <---------LBD16---- ------->AtSPL3 --------->ATHB12------>ZmHOX2a(1)---------->DOF2     <----------DOF2----------->HVH21   actcgtccatgaaaacattgatttcgctgatctcctctaactttgactttataaagctcactaaggttttcctttgagctttacccctgaaactgatgaa  12270500                                                          =================================HOX2a_HOX2a                                                          ------>ZmHOX2a(2)                                                          ====================HOX2a_HOX2a                                                         ==================================HOX2a_HOX2a                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                        --------->ARR14(3)                                                        <---------ARR14(3)                                                        --------->AGP1                                                        <---------ARR14(2)                                                        <---------AGP1                                                        --------->ARR14(2)                                                     *TSS=====================HOX2a_HOX2a                                                  <---------ETT(2)             ------>NtERF2                        --------->ETT(2)     <------ZmHOX2a(1)            ----------->HVH21                 <---------YAB1<---------YAB1  <---------REM1(1)          --------->ANAC46                    <---------TOE2(3)  <---------ZAT14         <---------LBD16                      <---------TOE1(3)<---------WOX13(1)               -----      <---------ANAC58                     --------->ARR14(2) <------------CBF            <---------ARR11(3)      <---------ANAC58                     <---------ARR14(2)--------->ATHB12       <------ZmHOX2a(1) ----->ZAT6--------->LBD16              <---------TOE2(3)<------ZmHOX2a(2) --------->ARR11(3)  <-----   cacttgaggcttccgcgactgagaagagttcgtcatttggatgaggttatggtagacagatcttgattgcagaggaagatgtagaaggagaagatgtatt  12270600                                             <----------DOF2                                   --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC58                               --------->ALFIN1                    <------------CBF        <---------DAG2                <---------------AGL15       <---------ANAC58         ------->GAMYB<---------DAG2              <-----------------AGL3     -       --------->TOE2(3)      <---------REM1(2)                    <---------YAB1                   <       <---------ANAC58     <---------WRKY38(1)                --------->AHL20(2)                   < <---------ZAT6    --------->ATHB12--------->ANAC58            <---------AHL20(2)          <---------MYB52(1) ---->YAB1        --------->MYB46(3) ---------->DOF2        <---------ICU4--------------->AGL15     - ----YAB1       <-----------GT1<---------ALFIN1          --------->YAB1  <-----------------AGL2 <----   atagtgtttccttgatgttaaccattgaagtcaacacaccaaagtcccttttcatgtattcataattttttgattactaaatgtggagacaccgttttta  12270700              --------->AHL20(2)    <-------MYC2                                                 ------>MYB83    <-------MYC3                                                 ------>MYB46(1)    ------->MYC3                                               <---------MYB59    ------->MYC2                                            <-----------GT1 -------->ZAT14                  <---------YAB1         --------->LBD16 ---------ZAT14             <----------DOF2            <---------ANAC55(2)                   -------- ---------ZAT18           <---------At4g35610          <---------ANAC46                      <------- -------->ZAT18      <---------ZAT6<<<<<<<<<MYB98      <---------ANAC55(1)               <---------AHL20(2) -------GT1  <---------MYB52(1) <---------TOE2(3)     ------>ZmHOX2a(2)                  --------->AHL20(2)   actgcacatggttccattaattagtgtgagcttttatgttaaactgatacacttgatccgtataacctaatgtttctgtagagcttcttatttaaaatct  12270800                                                   --------->ARR11(3)                   <---------YAB1                                                   --------->AHL20(1)                  --------->AHL20(1)                                          <---------ARR14(2)                           <---------AHL20(1)                                          --------->ARR14(2)                           --------->AHL20(2)      <---------AHL20(2)                  ------->TEIL                                 <---------AHL20(2)   --------->AHL20(1)            --------->CCA1(2) <---------ARR11(3)                 --------->AHL20(2) ->ARR11(3)       --------->ANAC58       <---------CCA1(2)   <---------CCA1(2)     --------->REM1(1) --ARR11(3)       --------->ANAC58<-------TEIL ---------->DOF2              <---------At4g35610   atacatatattatctccaacaaggcaatagtttagatacatctgtatctgaaagatattgtctctatcttgtgtcttcaactgctacattatattaaaca  12270900                                                                                                  ---            --------->TOE2(3)                                                                  ------       <---------ANAC58                                                      <---------AHL20(2)------       <---------ANAC58           <---------TOE1(3)                          --------->AHL20(1)<-----  <------MYB83                    <---------TOE2(3)                          <---------YAB1   <------  <------MYB46(1)                ---------->DOF2                            --------->AHL20(2)<------ --------->MYB59 <---------WOX13(1)      <---------YAB1                     --------->YAB1    <------ <---------TOE2(3)          --------->ICU4                <----------DOF2--------->YAB1       -------   aattaggttccatgccttaattgatgtgcaatttttaaagtttattatggagtctttggacttttggtcataaactaataatattgcaagtttgcaacca  12271000                                                                                                   <-                                                                                                   <-    <----------DOF2                             ---------->ID1                                     <- ------>DEAR3(1)                            <----------DOF2                                     ----- ->GAMYB <----------DOF2              <---------ATHB12                                          ----- --->AtMYB61                         ------>MYB83                                               ----- ----ALFIN1                          ------>MYB46(1)                                           <----- ---ABI4(2)                       --------->MYB46(3)                                          <------ ---MYB55(2)                     --------->ANAC58                      ----------->GT1        <------ ---MYB52(2)                     --------->ANAC58                    <---------GLK1(2)  <---------AHL20(2) -->MYB46(3)                    --------->WOX13(1)     <---------AHL20(2)               <---------YAB1   ccgagtcttttctttgtcttagcatattttttgtcaaccaatctttctttgtcttaattcatttttggccagattgtaagtatgttttatattatagggt  12271100  Previous    Next  AGI:  At4g23510.1    Description:  disease resistance protein (TIR class), putative. similar to Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G11340.1); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 12267526    to: 12270553    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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