Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->MYB52(1)                                                                                     <---------YAB1                                                                                   -------->HAHB4                                                                                   --------->YAB1                                                                                   <---------ICU4                                ----------->RAV1(2)                               <---------ATHB51                            <----------DOF2                                     <---------ICU4 -------TOE1(2)             <---------DAG2                                     ------>ZmHOX2a(1) -------TOE2(2)       <-----------GT1                             <-----------GT1 --------->ICU4 ----HVH21<<<<<<<<<<<<<<<<<LFY<-----------GT1      --------->MYB52(1)         <---------MYB59      --   caggtttcttcggtacaatggttcttaccactttacctgcttctcacaaaaaaaaacagagtcactattttcgttttcttcctaattatgacaaactgaa  12256600                                                            <------ZmHOX2a(2)                                                            ==================================HOX2a_HOX2a                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                           --------->ARR11(3)                                                       --------->REM1(2)                                              ======================HOX2a_HOX2a                                      <---------MYB52(1)   <---------ARR11(3)                                 <-----------GT1----------->HVH21                               --------->YAB1 =====================HOX2a_HOX2a                      <---------ARR11(3)    ------>ZmHOX2a(2)=================================HOX2a_HOX2a         --------->ARR11(3)    <---------ICU4 --------->LBD16------>ZmHOX2a(2)        <------ZmHOX2a(1)  --------->AHL20(2) ------>ZmHOX2a(1)      <---------TOE2(3) ----------->GT1     ----------->RAV1(2)     <-----------GT1          <------- ------->YAB1<---------YAB1<---------AHL20(2)--------->TOE1(2)     <-----------GT1     <------ZmHOX2a(1)   atcatatgaaggattttgatacaagatagttaattataccgtttgatcctgagaccgtgaagatcggttttaacttctctataagagcaggaaaacgtcg  12256700                                                                          <------ZmHOX2a(2)                                                                          --------->GLK1(1)                                                                          <---------GLK1(1)                                       --------->AtLEC2                  <---------ARR11(3)                                  --------->WOX13(1)                     --------->ARR11(3)                               --------->ARR11(3)                        <---------ARR14(2)       <------MYB46(1)         <---------ARR11(3)                        --------->ARR14(2)       <------MYB83--------->ARR11(3)  --------->ANAC58                  --------->AGP1      --------->MYB59------>ZmHOX2a(2) --------->ANAC58           <---------YAB1    <---------ALFIN1      --------->MYB111(1)     <---------CCA1(2)                --------->TOE2(2)  ----------->RAV1(1)      --------->MYB46(2)   --------->AHL20(1)                >>>>>>>>>MYB98------>ZmHOX2a(2)      --------->MYB52(2)   <---------AHL20(1)            <---------ZAT6  <---------AGP1    <---------MYB52(1)     <---------ARR11(3)          --------->ZAT14  --------->At4g35610         < ----HVH21         <---------ARR11(3) --------->WOX13(1) ----------->GT1<---------CCA1(2)           -   catgaggttaggttctacgttgatctcaatatatatctatcaagcaaacaagaacagtagagtaacatatgatcagatctcttgcaacacttgagagact  12256800                               --------->AHL20(2)                        -------->HAHB4                     <---------ICU4                     --------->YAB1                    <---------AHL20(2)                    --------->ICU4                    <---------ATHB12        ------>MYB46(1)--------->ICU4        ------>MYB83<---------ATHB51      --------->AtMYB61<---------YAB1      <---------MYB111(2)      <---------AHL20(2)                         <---------ZAT6      <---------MYB55(2)<---------AHL20(2)                              <---------TOE1(2)      --------->MYB46(3)<---------ICU4 --------->ANAC58              --------->YAB1      <---------MYB111(1) <---------YAB1          --------->YAB1   --------->GLK1(2)  --------->MYB46(3)--------->AHL20(2) --------->ANAC46  --------->ARR11(3)   <---------AHL20(2)  <-- -----------GT1<<<<<<<<<ARR2--------->TOE2(3)   <---------WOX13(1)<---------GLK1(2)            ------ -------->ANAC46--------->AHL20(2)     --------->ANAC58  <---------ARR11(3)  --------->AHL20(2)<-----   ataaaccaccaactacaatcaaataattattcttaaattacaaggaattgaatgatcaagaacttcaagaatcgtagtattaaatgagaaaacagagatt  12256900                            --------->MYB52(1)                           <-----------GT1                        <---------ICU4                        --------->YAB1     <-------TEIL      <---------ATHB51 <---------TOE1(3)     --------->AHL20(2)                                                           - <---------TOE2(3)     <---------AHL20(2)                                                           < -------YAB1           --------->ICU4                                 <---------MYB52(1) <----------DOF2 --->ICU4         ----------->GT1                           <---------ANAC58        ---------->DOF2 - ----YAB1   <------ZmHOX2a(1)     --------->GLK1(1)         <---------ANAC58 <----------DOF2   <-----   attaacgtacaagaggaagatggaaataattaccagatttcaaagtctgagcaaattcaaatgagtgtctcggtttcttcttttgcgaaagcttttcttc  12257000                                                                   --------->HSFB2a(2)                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                               <---------HSFC1(2)                                                               <---------HSFB2a(1)                ---                                                               --------->HSFB2a(1)            <------                                                               --------->HSFC1(2)            <-------                                                     --------->HSFB2a(1)                     --------                                                     <---------HSFB2a(1)                  --------->AHL20(2)               <---------ARR14(2)                    <------MYB46(1)--------->LBD16      <---------AHL20(2)             <---------TOE2(2)                    <------ZmHOX2a(1)<---------HSFB2a(2)   --------->AHL20(2)             <---------TOE1(2)                   *TSS<------MYB83  <---------LBD16    <---------AHL20(2) -------->ZAT14--------->ARR14(2)              <---------At4g35610<---------LBD16    --------->AHL20(2) ---------ZAT14<---------GLK1(2)               --------->At4g35610<-------TEIL       <---------AHL20(2) -------->REM1(2)                       ---------->DOF2   <---------HSFB2a(2)    --------->AHL20(2) ----ZAT14------>ZmHOX2a(2)   ----------->GT1  <------NtERF2  ----------->ARR10  <---------AHL20(2)<-   agtgaagactgatcgcagatttgtttttagtttggataatttcaaaggcagaggaaggtttgagaaggtccgggactcttggtttaattaaataatttta  12257100                     --------->ATHB51                     <---------ICU4       --------->AHL20(2)                    <---------YAB1  ------>NtERF2        --------->TOE2(1)           --------->LBD16                                               <--        --------->TOE1(1)          --------->RAP2.6(2)                                            <--       --------------->AtSPL8      <---------ANAC46                     --------->CCA1(2)         <-- ------>AHL20(2)    --------->ICU4<---------LBD16 --------->AHL20(2)   --------->ARR11(3)     <------ ---AHL20(2) <----------DOF2 --------->ARR14(2)   <---------AHL20(2)   <---------ARR11(3)     <------ --AHL20(2)  <---------DAG2  <---------ICU4<---------AHL20(2)      --------->LBD16       <---------At4g35610 ->AHL20(2)<---------TOE1(2) <---------ARR14(2)--------->AHL20(1) <---------HSFB2a(2)    <---------ZAT2 --------AHL20(2) --------->YAB1<-----------GT1<---------AHL20(1)<-------TEIL      --------->ATHB12   taaaatagcctcgtactttttcattatttcatatttgccgcatatttaatatataatttcattcaggtccagagatatagtccattgatttagctggttt  12257200                                                                                             <-------                                                                                           --------->YAB1                                                                                         <---------YAB1                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                       <---------ICU4                                                                                      --------->ICU4                                                                                      <---------YAB1                                        <---------AHL20(2)                       --------->TGA2(1)                                      <---------RVE1(1)                          --------->ANAC55(2)                                      <---------CCA1(1)                          <---------TGA2(1)                                     <---------GLK1(2)                           <---------ANAC46                                     <---------ARR11(3)                          <---------ANAC55(2)                               --------->DEAR3(2)                                <---------bZIP60(1)                              --------->SPL7                                     --------->bZIP60(1)  <----------DOF2             --------->MYB52(1)                                 ----------->GT1 -------ANAC58                ------->TEIL                                      ----------->STF1 -------ANAC58              <---------SPL7                                     <---------TGA2(2) -------ANAC46        --------->YAB1 --------->ARR11(3)                       ----------->TGA1------- ---ANAC58         <---------AtLEC2----------->ARR10                          ----------->HVH21 ---ANAC58  <-------TEIL  <---------------AtSPL3--------->TOE2(3)          <-------TEIL--------->ATHB51   gcgtctttgacaaatacatttgaatgaaaacgtaccgaagattttttttttcttaaaacaacttgtattaaacatggtacatgacgtaattatttatgat  12257300                                                                                          --------->ICU4                                                                                     ----------->GT1                                       <---------DAG2                                <---------ANAC55(2)                                 --------->GLK1(2)                                 --------->ICU4                         <---------AHL20(2)                                   --------->At4g35610                   ----------->GT1     <----------DOF2                        <---------At4g35610   --------->TOE2(3)     --------->AHL20(2)   <-----------GT1               <---------ZAT18 --YAB1        ---------->DOF2<---------AHL20(2)                      --------->YAB1<---------ICU4 -->YAB1  --------->AHL20(2) --------->AHL20(2)         <-----------GT1     --------->ZAT18   aaaaacatcaaaataaacaaagtgtaatttataaaattctgctttttttttcggttttatacaatttagcaaacatagtgagctaataagtaaaaatttg  12257400                                                           <---------ICU4                                                          --------->ICU4                                                <------MYB83                                                <------MYB46(1)                                         --------------->AGL15                  <---------MYB52(1)                                         <---------------AGL15                ----------->GT1                   <------ZmHOX2a(2)    <-----------------AG             --------->AHL20(2)                  --------->ARR11(3)    <-----------------AGL1           <---------AHL20(2)         <------NtERF2                  <-----------------AGL3    --------->ANAC58       <---------LBD16--------->ANAC58  <-----------------AGL2    ----------->GT1    --------->MYB52(2)--------->ANAC58  ----------------->AGL3    --------->ANAC58  <---------MYB52(1)---------->DOF2<---------ZAT6    ----------->GT1    --------->AHL20(2) ----------   ttttgttagtcgggataagagatcaagccctcatctagtgtttctacatttggtattgtaaatatgacaagaaaattaattcgttacatttttgaaagtt  12257500  Previous    Next  AGI:  At4g23493.1    Description:  unknown protein Range:  from: 12256190    to: 12257049    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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