Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -------->ZAT6 ----->P --->MYB83 --->MYB46(1) ----->MYB55(1) -----MYB46(2)                                                                    --------->TOE2(3) -----MYB111(2)                                                                  <---------ICU4 -----MYB111(1)                             <---------YAB1                   --------->AHL20(2) -----MYB59  --------->YAB1          --------->ANAC55(2)                    <---------YAB1 -MYB111(2)  --------->TOE1(3)    <---------AHL20(2)                     <---------MYB52(1)    ------ -MYB46(2)   --------->TOE2(3)--------->AHL20(2)                       ----------->GT1       -------- >MYB46(3)<---------CCA1(2)   <---------AHL20(2) ---------->DOF2    ------------>MYB.PH3(1)  <-------   tacctctaattcttatcttaaaacaacattttttaatttaagtattatgctcaaagactaactagatagaaaaccgttattaaacattaaacgaattaaa  12220400                                                                        ---------->DOF2                                                                     <---------ATHB12                                                --------->AHL20(2) --------->WOX13(1)                                        <---------WOX13(1)       <---------YAB1    <---------AtLEC2     --------->ANAC46       --------->YAB1  --------->TOE2(3) ---->DOF2       <------MYB46(1)      --------->ATHB12         --------->YAB1      <---------ANAC58 ->AHL20(2)      <------MYB83        --------->ICU4           <---------ATHB12     <---------ANAC58 - --AHL20(2)  <---------REM1(1)       <---------YAB1 --------->AHL20(2)--------->YAB1               --   agtcttacatggaaaatgtaggtttataaaccacgagttatgattgacaataaaaaaaatgcaaatcatcaatcaaaagagacttgagtgcgactctata  12220500                                                                                       ----------->GT1                                                                                     --------->ICU4                                                                                   <--------HAHB4                                                                                   --------->YAB1                                                                                  <---------YAB1                                                                                  <---------AHL20(2)                                                                                --------------->AGL15                                                                               <-----------------AGL3             <---------YAB1                                                    <-----------------AGL2            --------->AHL20(2)                                                 ----------------->AGL3            <---------AHL20(2)                                                 ----------------->AGL2           --------->AHL20(2)                                            --------->AHL20(2)  --------->ATHB12                                                       <---------AHL20(2)  <---------ICU4                                                        --------->AHL20(2) --------->MYB46(3)                                                     <---------AHL20(1)    <------ <---------ATHB12       --------->YAB1           <---------AHL20(2)     --------->AHL20(1)   -------- ------->P --------->YAB1                     ----------->GT1           <---------AHL20(2)   <------- ------->WOX13(1)    --------->WOX13(1)       <---------TOE2(3)  <-----------GT1<---------------AGL15   tcaaccattgcaattaaaattatctatcacaaaaattttagacagattaagttaatttagtctaaattcactaatttattttctataattagtaattaac  12220600                                                                                               <-----                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                          <--------HAHB4                                                                                          --------->ATHB51                                                                                          -------->HAHB4                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                          <--------ATHB1                                                                                         --------->AHL20(2)                                                                                         <---------YAB1                                                                                         --------->ICU4                                                                                         <---------ATHB51                                                                                       --------->YAB1       --------->AHL20(2)                                                             --------->AHL20(2)       <---------AHL20(2)                                                         <---------AHL20(2)      <---------AHL20(2)                                                          --------->AHL20(2)   --------->AHL20(2)                                                            --------->AHL20(2)   <---------AHL20(2)                                      <---------ARR11(3)    <---------AHL20(1) -----GT1              --------->YAB1                --------->YAB1  --------->ICU4   <---------AHL20(2) ->AHL20(2)           <---------YAB1        --------->YAB1 --------->ARR11(3)    --------->AHL20(1) --AHL20(2)<-----------GT1              <---------AtLEC2   <---------GLK1(2)     <---------AHL20(2)   tatatttatttatttacacattttctgataatttagaaatttgcatgaataacaaatataagattttggaaattagtagcaaatttaattaataattatt  12220700                                                                              <---------YAB1                                                                         <------MYB83                                                                         <------MYB46(1)                                                                        --------->ALFIN1                                                                        <---------AtMYB61                                                                        <---------MYB46(3) ----YAB1                                                               --------->MYB111(1) --ICU4                                  --------->YAB1                 --------->MYB111(2) ->AHL20(2)        ----------->TBP      <---------ATHB12            <---------TOE2(3) ->ATHB51     ------>MYB46(1)     --------->ANAC46                 ---------->DOF2 --AHL20(2)   ------>MYB83       <-------TEIL                 ------->GAMYB <---------MYB46(3) >ICU4      <---------MYB59 <---------ALFIN1                 <---------MYB52(2) -YAB1    ------->TEIL   --------->AtMYB61           *TSS    --------->MYB46(3)   tttgcctaaatgaaccaaactataaaacctccacatacaccagtcatcaaatttacagagacaacaaactaaagttggtggtgatagagtgagagagaaa  12220800                                                                      <---------At4g35610                                                                      <------NtERF2                                                                      --------->At4g35610                                                                      --------->ATERF1(1)                                                                     <---------ATERF1(1)                                                                     <---------ERF1                                                                     ------>NtERF2                                                                     <---------RAP2.3(1)                                                                     <---------DEAR3(2)                                                                     <---------MYB46(3)                                                                    <---------RAP2.6(2)                                                                    <---------RRTF1(3)                                                                    <---------RAP2.3(3)                                                                    <---------RAP2.3(2)                                                                    <---------DEAR3(1)                                                                  <---------RAP2.3(1)                                                                  <---------ATERF1(1)                                                                 <---------DEAR3(1)                                                                --------->SPL1(2)                                                                --------->SPL7                                                               <---------SPL1(1)                    <                                                              <---------SPL7                        -                                                             <---------DEAR3(2)                   ---                                                            ===================================HOX2a_HOX2a                                                           ====================================HOX2a_HOX2a                                                           <------ZmHOX2a(2)                      <--                  <---------O2                             <------------------SPL14              <---                  --------->O2                            --------->ARR14(2)            <------ZmHOX2a(1)                 <-----------STF1                         <---------ARR14(2)          --------->ANAC58       ---------->DOF2                                --------->At4g35610 ----------->HVH21    ------    --------->ANAC58                                  <---------At4g35610<-----------RAV1(2)   <-----    --------->ANAC58    <-----------RAV1(1)  --------->LBD16------>ZmHOX2a(2)         --------->ANAC58   catggaaggcaaagaagaagacgtcaatgttggagccaacaagttcccagagagacagccgatcggtacggcggctcagacggagagcaaggactataag  12220900             <---------ANAC46            <------NtERF2            --------->ATERF1(1)            --------->DEAR4(2)           ------>NtERF2           --------->ABI4(2)           <---------RAP2.3(1)          <---------DEAR3(1)          --------->DEAR3(1)          --------->RAP2.3(2)         --------->RAP2.3(1)         --------->RRTF1(1)         --------->RAP2.6(1)         --------->ATERF1(1)         --------->ERF1        <---------ATERF1(1)       --------->DEAR3(1)       <---------ATERF1(2)       --------->ATERF1(2)       <---------DEAR3(1)     --------->MYB52(1)    --------->AtMYB61    --------->DEAR3(1)                                                                              -    <---------ALFIN1                                                                                -   --------->MYB46(3)                 <---------ARR14(2)                                           <-   <---------MYB55(2)                 --------->ARR11(3)                                           <- --------->AtMYB61              <---------ZAT2                    <---------At4g35610             --- ---------MYB55(2)              --------->ZAT2                    --------->At4g35610             --- -------->MYB46(3)          <------NtERF2                         <---------ZAT2                  --- ------>ARR14(2)           --------->LBD16               <---------ZAT14                      ------>ZmHOX2a(1) -------ARR14(2)         <---------LBD16       <----------DOF2  <---------GLK1(1)       <----------DOF2 ---ZmHOX2a(1) <---------MYB52(1)    <---------CCA1(2)   --------->ZAT14                <---------DAG2 --->ANAC46<---------ATERF1(1)  <---------At4g35610      <---------ZAT2            <----------DOF2--- ----TOE2(3)--------->RAP2.3(1) --------->At4g35610      --------->ZAT2  <-------TEIL----------------   gaaccaccaccggcgccgtttttcgaacccggcgagctcaaatcttggtctttctacagagcagggatagctgagttcatagccactttccttttcctct  12221000          >>>>>>>>>WRKY18         ----------->HVH21                                                                     <-----      <---------MYB52(1)                                                                      ------>ZmHOX2a(2) ---------->HVH21               --------->GLK1(1)                                            <------- -------->TGA2(2)               <---------GLK1(1)                       <---------ANAC58    --------- ----------HVH21                --------->ZAT2                          <---------ANAC58    <-------- ----------TGA1                 <---------At4g35610             --------->ANAC58        <---------ANAC58 ------>ANAC46                  <---------ZAT2       <-------GAMYB   <------NtERF2      <---------ANAC58 ------>ANAC58         <-------GAMYB        <---------ANAC58    --------->ANAC46       <------NtERF2 ------>ANAC58<-----------HVH21 --------->At4g35610 <-----------RAV1(1) <---------ANAC46<---------ANAC46 ------>bZIP60(2)   <---------ANAC58        <---------ANAC58    --------->ANAC58  <---------AtMYB61 ------->TaNAC69(2) <---------ANAC58   xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <----------DOF2<------   acgtcaccgttttgacagtcatgggtgttaagagagctcccaatatgtgtgcctctgttggaatccaaggcatcgcttgggcttttggtggcatgatctt  12221100                                    <-----------ARR10                                    <---------AGP1                                    --------->GLK1(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                                    --------->ARR14(2)                                <-----------RAV1(2)                  --------->HSFB2a(2)<------ZmHOX2a(2)                                              <                --------->At4g35610 <---------ARR14(2)                                  --------->ARR14(2)      <---------ZAT14<---------GLK1(2)------>ZmHOX2a(2)                                 --------->GLK1(2) -----DOF2      <---------At4g35610<------ZmHOX2a(1)                         <---------TOE2(3)      - --YAB1<-----------GT1         <-------TEIL                                  --------->MYB59       <- >ARR11(3) <---------ZAT14 <---------TOE1(2)                                 <---------TOE1(3)     <- -ARR11(3) --------->ZAT18 <---------TOE2(2)                   <---------TOE2(3)        <---------ARR14(2) ---ICU4   --------->ZAT14<-----------RAV1(2)                  <---------TOE1(3)       <---------GLK1(2)   tgctcttgtttactgtactgctggaatctcaggttcaggatctgttcttgctctgaattttgtttaaagttttcgaatttaggttgaaggaatctggaat  12221200           <---------MYB46(3)         <---------ANAC58         <-------GAMYB         <---------ANAC58     <---------ANAC46     <---------ANAC58     <---------ANAC58    --------->MYB52(2)                                                 --------->ATHB12 ---------ZAT6                                               <-----------GT1    <----------DOF2    -- ---------->GT1                                      ----------->GT1---------->DOF2           ------- --------TOE1(3)                                   ---------->DOF2 --------->AHL20(2)         <------ --------TOE2(3)            <---------AHL20(2) <---------ANAC55(2) <---------AHL20(2)      <---------   tagggttacttggttgtgagaaacttggatataatgaagaaagtttgatacttaaaagtaatttcacatttaaagattgaaactttgagtaattttcttc  12221300  Previous    Next  AGI:  At4g23400.1    Description:  PIP1;5/PIP1D (plasma membrane intrinsic protein 1;5); water channel. Identical to Probable aquaporin PIP1-5 (PIP1-5) [Arabidopsis Thaliana] (GB:Q8LAA6;GB:O81736); similar to TMP-C (PLASMA MEMBRANE INTRINSIC PROTEIN 1,4), water channel [Arabidopsis thaliana] (TAIR:AT4G00430.1); similar to trans-membrane water channel protein [Brassica juncea] (GB:ABO71659.2); similar to plasma membrane aquaporin (PAQ1) [Raphanus sativus] (GB:BAA32777.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 12220753    to: 12222381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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