Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>ZmHOX2a(1) ------>ZmHOX2a(2)                                                   =========================HOX2a_HOX2a                                          <----------DOF2           --------->At4g35610                             <-------TEIL <---------DAG2         ----------->HVH21                          --------->At4g35610      <----------DOF2  <---------At4g35610      <------- --------->ZAT18          <---------At4g35610   ---------->ID1<---------TOE1(2)   <-------TEIL<------ <---------ETT(2)   --------->At4g35610 ------>MYB46(1)    <---------ANAC58       <---------ZAT18 ----->MYC3         <---------At4g35610 ------>MYB83       <---------ANAC58       --------->ZAT18 <-- ------MYC3      <---------MYB52(1)   <---------MYB59      <---------ANAC46   --------->MYB59<------- ---HVH21       <----------DOF2    <------ZmHOX2a(1) <-----------RAV1(1)      <---------TOE2(3)   ---   atgtggacaacttattccctttagctgaagctgcataggaccaactttttgtcctttgttgtcgtatgtgatcggccatttaggtacacttgttggcttt  12215900                     --------->ZAT18          --------->ANAC58       <---------ARR14(2)       --------->ARR14(2)     <---------ARR14(2)     --------->ARR14(2)     <-----------ARR10 <-------TEIL        <---------ZAT14 --ANAC58 --------->ANAC46                                                            --------->MYB52(1) ----DOF2 --------->ANAC58                   <----------DOF2                       --------->TOE2(3) -------At4g35610    <---------ZAT18      <---------ARR11(3)               --------->TOE1(3)  <------ --ANAC58 <----------ID1 ---------->DOF2  --------->ARR11(3)    --------->GLK1(2)  --------->TOE1(3) ------>At4g35610  <---------GLK1(1)  ---------->DOF2      ---------->DOF2 --------->TOE2(3)  -------   agctgcatatatacgccaaggagttcacaaagtcattctctaaagagctttagtttatgtataaagaatttgataaacctcaaaaccttaacagagtggt  12216000                                <---------YAB1                                                   ----                            <---------ANAC58                                             ----------->GT1   <---------At4g35610      <---------ANAC46                                   --------->DAG2   <---- ---MYB46(3)                <---------ANAC58                                  ---------->DOF2   ----- ---->GT1              --------->MYB52(2)                        --------->ZAT14    ---------->DOF2   ttcttagcagatggtgatcaaaggctagttgcttgtgaatgtctatacaatcgaatatttcaacttgttcagtctattcaaaaagggaaagttgaaaaaa  12216100      --------->ARR14(2)      --------->ZAT14                                                <---------ALFIN1           <----  <---------TOE2(3)                                                 <---------ZAT18            ------ ------->GT1                                                        --------->ZAT18            <----- -----TOE2(3)               --------->ICU4               ---------->DOF2<----------DOF2   <---------TOE1(2) ---->DAG2 --------->YAB1   <---------YAB1<---------AtLEC2 --------->DAG2          <---------YAB1   ggttaatgtatactcataaaaacttatgtcatgtttcttagttagcatgtatgaagaaggaaaggctaagcccactttgaaacttttgatagcaggtttg  12216200                                                             --------->YAB1                                                          <----------DOF2                                                       --------->LBD16                                                       ------>NtERF2                                                      --------->LBD16          <---------At4g35610                        --------->LBD16     <----------DOF2      <----------DOF2            <---------LBD16   <-----------HVH21 ---GAMYB --------->At4g35610                   <---------GLK1(1)    --------->At4g35610 --->MYB52(2) <---------ANAC58                  <---------ARR14(2)<---------At4g35610 ----MYB46(3) <---------ANAC58                  --------->ARR14(2)--------->At4g35610          ------   ttgatagctttgagttgcctctccatttctttcttctcttcttccgatggaatcccccggctttcatgagctgcttcagagactaatacaagagaaattg  12216300                        --------->ATHB12        ----------->GT1<---------YAB1                                             <----------DOF2        <---------ANAC55(2)                                               <-----------ARR10        --------->ANAC55(2)      --------->GLK1(1)                    <---------At4g35610     --------->ARR14(2)<---------AHL20(2) <---------ANAC46        <-----------HVH21        <---------AHL20(2) ----->GT1   --------->ZAT6     <------ZmHOX2a(1)              ---------->DOF2<---------CCA1(2)   ttaacagaattcgtaacacaaggtttttattggaggaatccattgtgtataaaaaatggttatccaaaagtcagaggctcttatctttcttatgtaaatg  12216400                                                                             <---------ANAC58                                                                             <XXXXXXXXXXXXXXXXXXXXMIR400                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                        =======================bZIP_DOF               --------->GLK1(2)             --------->YAB1             --------->O2          ---------->DOF2                  --------->AtLEC2             <---------TGA1a        --------->YAB1                     --------->ANAC58             <---------O2      <---------AtLEC2      ------->TEIL                         --------->ANAC46 --------->ARR11(3)      <---------DAG2---   <---------ATHB12  --------->YAB1        --------->ANAC58 <---------ARR11(3)      <----------DOF2   aacaaatgaatcaaaagaatcagttatagtgaatgaacaacttacaagcaaaatgctgagaagaactcacagacaagtggcttatacttttttcatggaa  12216500                                                                ------>ZmHOX2a(2)                                                               --------->CCA1(2)                                                               <------ZmHOX2a(2)                                                              <---------AGP1                                  ---------->DOF2             <---------ARR11(3)                        <---------TOE2(3)                     <---------ARR14(2)                      --------->AHL20(2)            ---------->DOF2                     --------->AHL20(2)            <---------AHL20(2)                  --------->AHL20(2)              <---------AHL20(2)                  <---------AHL20(2)       --------->LBD16    --------->GLK1(2)                  --------->AHL20(1)      <---------HSFB2a(2) --------->ARR11(3)           ----------->GT1    ----------->GT1     --------->AHL20(2)     <-----------GT1       ---------->DOF2<---------AHL20(2)  --------->HSFB2a(2) --------->ARR14(2)    --------->YAB1<---------AHL20(1)      --------->HSFC1(1)  <---------ARR14(3)  --------->AHL20(2) <---------AHL20(2)   <---------HSFC1(1)  --------->ARR14(3)      --------->YAB1 ------>YAB1     --------->AHL20(2) <---------TOE2(3)       ----------->ARR10       --------->AHL20(2)   tcatattaataaagagtgaataaattaatgaatagttaaaggttccagaaaattaaaaggagaagatctgagattaaactcttcatattaatactgagaa  12216600                 <---------At4g35610         ------->TEIL         -------->P ---------->DOF2                              --------->YAB1        <-----------GT1                                          <---------ICU4     ------->TEIL--------->At4g35610                   ----------->GT1                --------->ATHB12     <-----------ARR10                   ---------->DOF2        <---------ATHB12    <---------WOX13(1)     <---------ARR11(1)          --------->DAG2       --------->DAG2<---------ICU4--------->ATHB12     <---------ARR14(2)         ---------->DOF2      ---------->DOF2<---------GLK1(2)<---------AHL20(2)     --------->ARR14(2)   --------->MYB52(1)  --------->GLK1(1) <<<<<<<<<ARR2     --------->ATHB51    <---------CCA1(2) --------->ANAC58 --------->HSFB2a(2)      <<<<<<<<<ARR1  --------->YAB1    <---------ARR14(1)--------->ANAC58 <---------HSFB2a(2)    --------->WOX13(1) <---------YAB1 <----   ataaacgtatctacctctctgctaaagcaaacagaaaagttctaaaagaaatctataaagtaaacaatcataatctcttaaacataattgattgtattta  12216700                     --------->DAG2                    ---------->DOF2         --------------->AGL15                ---------->DOF2                             --------->DAG2         <---------------AGL15          --------->DAG2                                --------->AHL20(2)        --------->TOE2(3)             ---------->DOF2                        --------->At4g35610        >>>>>>>>>RAP2.2             --------->YAB1 <------ZmHOX2a(2)         <---------At4g35610 ----     --------->WOX13(1)          <---------GLK1(1)<---------ARR11(3)     <-----------GT1 ---------->DOF2 -------GT1 --------->YAB1       --------->GLK1(1)--------->ARR11(3)<---------YAB1   --------->AHL20(2)   tctgtatcaatctaaaataagaaaaagggaagtggaaatcaaaaggcttaaagatcagaccatctaatttctgattttcatctcaaaataaaaaagttaa  12216800  Previous    Next  AGI:  At4g23380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14518.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 12214677    to: 12216343    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version