Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      ---------->DOF2                    <------MYB46(1)                            ---                --------->WOX13(1)                     <---------MYB46(3)                   <--------              <------ZmHOX2a(2)                        <------MYB83     ----------->GT1    <---------ARR14(2)           --------->ANAC46                          <--------P  --------->MYB52(1)        --------->ARR14(2)           --------->ANAC58                     <---------MYB52(1)--------->SPL7--------------->AtSPL8           --------->ANAC58            <---------AHL20(2)       <------NtERF2<---------YAB1<---------ARR11(3) --------DOF2--------->ARR14(2)--------->AtLEC2<-----------HVH21<---------SPL7  <---------------AtSPL8   ctttgtttatcacacgatccatcaaagcctgccatgtagatttaaactccgtcaagttggtttggccgaacgatgtgttatatttgtactcaatatactc  12180400                                                           ---------->DOF2                                                        ------>MYB46(1)                                                      <---------MYB59                                                      <---------MYB46(2)                                                      --------->MYB46(3)                                                      <---------MYB111(1)                                                    --------->SPL7                                                  <---------ZAT18                                                  <---------SPL7                                                  --------->ZAT18                                                 <---------ANAC58                                                 <---------ANAC46          --------->GLK1(1)                                                 <---------ANAC58         --------->ARR14(2)                                      <---------MYB46(3)------>MYB83      <---------ARR14(2)      ---                              --------->YAB1    --------------->AtSPL3  --------->LBD16        <-----                              --------->WOX13(1)<-----------------------TaNAC69(2)             ------ --->NtERF2                  --------->AHL20(2) <---------------AtSPL8 <---------HSFB2a(2)     <----- ---GT1                 <------ZmHOX2a(2)       --------------->AtSPL8 --------->HSFB2a(2) --------->At4g35610   tgcccatattatgtcttcgtcgagcgatccattaatcaagtggtttgagtagcgtaccaaacaaagcgagtctccagaactccagtctatagcttctgcc  12180500            --------->ALFIN1          <---------ANAC46         <-------MYC3         ------->MYC3                                         <---------REM1(1)               <------    <------ZmHOX2a(1)         <-------TEIL                 <-----------RAV1(1)                ------- ------>ATHB12               --------->CCA1(2)           ------>ZmHOX2a(1)                    ------- ------------AGL1     --------->CCA1(2)            --------->MYB46(3)                --------->LBD16 ----------->AGL1  --------->ANAC58                <---------KAN4(1)            --------->ANAC46    < ------------AG    --------->ANAC58                --------->HSFB2a(1)        <---------ALFIN1<------   tgattaggacatgtgtgtagcaaggtatgagatacactcgtgatacaatccgaacaatcctgtgttgtagtacctcggctacacatccccagaccatgtg  12180600                                                                                                   ==                                                                                                   <-                                                                                                   ==                                                                                             <------- -MYC2                   <---------ANAC46            --------->ANAC58                        <------- >MYC3          <---------WRKY18(1)           --------->TOE2(3)    <---------TGA1a           <------- >MYC2       <---------ANAC58               <---------YAB1         <---------O2    <---------TOE2(2) ---------YAB1<----------DOF2--------->HSFB2a(2)     --------->ANAC58         <---------ANAC46<------ -MYC3       <---------ANAC58<---------HSFB2a(2)----------->HVH21--------->CCA1(2) <---------TOE1(2)   ctatgtttggaccgggcttgaacggagtcttgtagaagccttcattatccttgacacgagaaggaagagacgagagcatggctcggaggtttatgtcgta  12180700                                        <------MYB83                                        <------MYB46(1)                                       <---------DEAR3(1)                                       <---------MYB46(3)                                       <---------AtMYB61                                       --------->MYB111(2)                                       --------->MYB46(2)                                       --------->MYB55(2)                                       --------->ALFIN1                         ------>ZmHOX2a(2)                        --------->GLK1(1)                        <------ZmHOX2a(2)                       <---------AGP1 <---------MYB55(1)                       <---------ARR11(3)                       --------->AGP1 <--------P    --------->At4g35610  --------->ATHB12     --------->ARR14(2)           <---------At4g35610 ===============================HOX2a_HOX2a     ----------->RAV1(1)                            <----- -----ZmHOX2a(1)       <---------ARR14(2)      ----------->HVH21                        --------->ANAC58 ==============================HOX2a_HOX2a    --------->At4g35610                       --------->ANAC58 --ANAC58              --------->ARR11(3)     <---------At4g35610                       --------->ANAC46 --ANAC58             --------->At4g35610  --------->ZAT14             <---------MYB52(2)     *TSS --ANAC46             <---------CCA1(2)--------->MYB111(1) --------->ARR11(3)         <---------ANAC58 ---SPL7 <----------DOF2<---------GLK1(1)  <---------ZAT14 <---------ARR11(3)         <---------ANAC58   aggaccattggctttgaaaaaatcagatctctgaatgcaggttggtgcagcgacagcacaagagcttatgaccacaaaccagaagattgctcgcaagtcg  12180800                                                                                          -----------                                                                                         --------->ANAC58                                                                          <------ZmHOX2a(1)                                                            <---------AHL20(2)           --------->ANAC58         <----------DOF2                                   --------->AHL20(2)          ---------->DOF2      ---------->ID1          <---------ANAC58           <---------ARR11(3)--------->ARR14(2) ----ETT(2)   <---------AtLEC2<---------ANAC58           --------->ARR11(3)<---------ARR14(2)     <--   accattttgttcttttgcatcgagtttgattttcttgtttaaaacctccagtcttgaaagatttaatattagaagaggattcgattttcaaaagcaatct  12180900                     --------->REM1(2)                    --------->ALFIN1                  <---------ANAC46                  <---------ANAC58            ----------->HVH21                           --------->ZAT18          <---------O2   <------ZmHOX2a(1)            --------->ARR14(2)          <---------bZIP60(1)                         <---------ARR14(2)          <---------bZIP60(2)                      --------->ANAC46                             <---- --------->YAB1   <---------ANAC55(2)           --------->TOE1(2)                               <---- ->CBF    --------->bZIP60(1)             <----------DOF2        ------->TEIL      <-----------GT1 --------DOF2     <---------ANAC58 ------>ZmHOX2a(1)  ------->TEIL       <-----------GT1   <---------   ctttcatatgtgatgtgactacgtgtaggactcattcctcccttctttttcatacgaatccactatgtatatttgtaaccctgtttcacaactcttttaa  12181000                          --------->LBD16               <---------AHL20(1)                          <---------LBD16               <---------AHL20(2)                         <---------ANAC46              --------->YAB1                         <---------ANAC55(1)      ----------->RAV1(1)                         <---------ANAC58       --------->ZAT18                 --------->MYB52(1)          ---------->DOF2           <---------AHL20(2)             --------->LBD16          --------->AHL20(2)             --------->ANAC46       <----------DOF2   <---------ANAC58--------->LBD16--------->AHL20(1)      <---------ANAC58  <-----------------------TaNAC69(2)            --------->ARR11(3)     ---------->ID1   <---------ARR14(2) --------->ANAC58             <---------ARR11(3) -----TOE2(3)    <---------At5g28300     --------->ANAC58            <---------GLK1(1) -----TOE1(3)   <-----------GT1      ------->TEIL ------->TEIL       <---------CCA1(2) -DOF2<---------ANAC58--------->ARR14(2)<---------LBD16--------->AHL20(2)    ---------->DOF2---------   ggtatttggcttttaaatttaccggttccgtggaaactgaaccccgcaaatgcaccattatattcaaatcgatatctttgaaagcttaagcgaaattctg  12181100                                     <---------ANAC58                 --------->At4g35610                                   --------->ARR14(2)                --------->ANAC46                                   <---------ARR11(3)               <---------LBD16                                   --------->ARR11(3)           --------->ARR14(2)                                   <---------ARR14(2)           <---------ARR14(2)                                  <---------CCA1(2)            <---------CCA1(2)                                --------->ANAC55(2)          --------->YAB1                         <---------AHL20(2)       <---------------AtSPL3     ----------->GT1                        --------->AHL20(2)        <---------------AtSPL8 <---------SPL7                     <----------DOF2 <---------ANAC58   --------->ICU4--------->LBD16        <------- >GLK1(2)     <---------YAB1  <-----------GT1 <---------YAB1<-------TEIL<----------DOF2------->TEIL   tagttttgtttttcttatgatgtcttttaaatttacatatcttgcattataaatagtactgattcatatccccgctgtagggaaaaatgtatttttcaca  12181200                                                    --------->ANAC58                                                    --------->ANAC46                                                   <-------MYC3                                               ------->GAMYB                                            ------>MYB46(1)                                            ------>MYB83                                          <---------MYB59                                          ------->GAMYB                                         --------->ANAC46                      <-----------GT1   ------>MYB46(1)  <---------ARR14(2)                  --------->ARR11(3)    ------>MYB83--------->ANAC58       --------->ANAC58                  <---------ARR11(3)    -------->P ------->MYC3          <------ZmHOX2a(1)          -                ----------->ARR10    --------->MYB46(3) --------->WOX13(1) --------->ANAC58       --- ----GT1     --------->ALFIN1   XXXXXXXXXXXXXXXXXXXX>MIR3440B-5P--------------->AGL15             <--   ttttcaaaacaaaatgtggagattttaccattttccctagccaacccaactcacatgccaatctcgctcgatataggacccaatacaaaaacaaaacaaa  12181300  Previous    Next  AGI:  At4g23290.1    Description:  protein kinase family protein. Identical to Cysteine-rich receptor-like protein kinase 21 precursor (CRK21) [Arabidopsis Thaliana] (GB:Q3E9X6;GB:O65480;GB:Q8LPL4); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63725.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/thr Range:  from: 12177748    to: 12180794    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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