Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ---------->DOF2                            --------->LBD16                            ------>ZmHOX2a(1)                           --------->TOE1(2)                          ------>ZmHOX2a(2)                        <---------ARR14(3)                        <---------GLK1(2)                        --------->ARR11(3)                        <---------ARR11(3)                        --------->ARR14(2)                        --------->ARR14(3)                                --------->O2                    --------->At4g35610                                   --------->ZAT2                    <---------At4g35610                                   <---------TGA1a                 ==================HOX2a_HOX2a                            <---------O2  --------->ANAC58                 <------ZmHOX2a(2)                                        --------->TGA1a                --------->ARR14(2)                                        <---------ZAT2--------->ANAC58                <---------ARR14(2)                                        ----------->RAV1(2)      <-               <---------At4g35610                                        --------->At4g35610      <-               --------->At4g35610                                        ===========================        --------->LBD16 <---------ARR14(2)                                <---------At4g35610      <-        <---------TOE1(2)<------ZmHOX2a(2)         <---------ZAT18     ----------->HVH21--------->ANAC46       <---------ANAC46<---------GLK1(1)           --------->ZAT18 <---------DEAR3(1)--------->ARR14(2)      <---------LBD16  --------->GLK1(1)          <---------ANAC46<---------MYB52(1) <---------ARR14(2)     <---------ANAC46 ----------->ARR10<-----------RAV1(1)  ========================bZIP_DOF      --- -MYB46(3)  <-------TEIL--------->AGP1 --------->ALFIN1     ---------->DOF2       --------->ICU4<----   gccaatttcgcgggttcagatcagcagatcctgagaaagaagtgttggagtagcgcacatagcaaagcgttggctcacctggccatgaatacgcctctgt  12143400                                                                        ------>ZmHOX2a(1)     <------ZmHOX2a(1)                                                  --------->LBD16   --------->MYB59                                                     <---------LBD16              - --------MYB46(3)                                                      --------->TOE1(2)            - -----MYB83                                        --------->ZAT14     --------->TOE2(2)         <--- =======================bZIP_DOF    <---------ANAC58      --------->At4g35610                  ------ -----MYB46(1)                      <---------ANAC58      <---------At4g35610   ------->TEIL<-------- ------>MYB59<----------DOF2     <----------DOF2   <---------ZAT14    ------>ZmHOX2a(2)     <-------- -----MYB52(1)      --------->AHL20(2)         --------->YAB1       --------->ARR11(3)      <--------   ttggttaggacaattctttaaaaaaaattcagactctttcttgatacaatcagaacagtcttctgaagttgatcctgggatgcacatccctattgcgtag  12143500          <-------GAMYB         --------->MYB52(2)       <---------MYB52(1)       <-------GAMYB      <------MYB46(1)      <------MYB83     --------->MYB59   <---------MYB52(1)                               ----------->HVH21  <---------SPL7                                   --------->LBD16 -------->ANAC58                                  <---------ANAC55(2) -------->ANAC58      <---------ARR14(2)          --------->ANAC55(2)                       <-------- ------REM1(2)        --------->ARR14(2)          <---------ANAC58                        <----------DOF2 ----->ARR10     ------>ZmHOX2a(1)       <---------RAP2.6(3)                          <------NtERF2 -ANAC58 <---------MYB46(3)             --------->RAP2.6(2)                         <---------DEAR3(1) -ANAC58 --------->MYB55(2)          --------->ANAC46                            ----------->HVH21  < -ANAC46 --------->MYB111(2)     <---------ZAT6   <---------ANAC58           <------ZmHOX2a(1)-------   acacggttcggttgttgtcctatggaaccgttgtagtataagccgtcttggtccgtgacatttgaaggaagagaagagaggatgagacggcgatttacgt  12143600                      <---------ZAT18           <---------ANAC58           <---------ANAC46           <------MYB46(1)                     <---------At4g35610           <------MYB83                        --------->At4g35610           <---------ANAC58       <---------ANAC46          --------->MYB55(2)      <---------ANAC58                --------->AtMYB61        <------ZmHOX2a(1)        <---------MYB52(1)        <---------ANAC58             --------->REM1(1)          <---------ZAT14 ---GT1<-------GAMYB  --------->ZAT18 <---------AtLEC2       ----------->RAV1(1)          --------->ZAT14 ---------TOE1(2)---------->DOF2 <---------MYB52(1)       --------->ANAC58          --------->MYB52(1) -->ANAC46<---------MYB46(3)    <-----------HVH21         --------->ANAC58    ----------->GT1   cgtaagtaccgttgggtctgaaagtccccttgtccgtcgtgcatgtttgtgctgaaactgaagcaacaccaaaacttatgaagaaaaaacagaggactga  12143700                                                           <---------ANAC46                                                  <----------DOF2                                                 ------>ZmHOX2a(2)                                               --------->ARR11(3)                                               --------->ARR14(2)       --------->At4g35610                       <---------ANAC58        <---------ARR11(3)      ------->TEIL<---------ANAC58                       <---------ANAC46        <---------ARR14(2)   --------->ANAC46                       <---------ANAC58        <---------AGP1       --------->ANAC58  -------->P               --------->ATHB12                --------->AGP1<---------ZAT6  ------->TEIL          --             <----------DOF2                  <---------CCA1(2)     --------->ANAC58 <-----------GT1           --------->At4g35610         ---------->DOF2   <---------ZAT14<---------At4g35610        --        ------>ZmHOX2a(1)        ---------->DOF2<------ZmHOX2a(2)----------->HVH21 <---------ANAC58--   aaacaaactcctctgcttcattgtttcttgaagattaaagcaaaagctagatctttgtgtttagtgtttgacgcatctgtacgtttcttaccagtttaaa  12143800           <---------HSFC1(2)                                                         <---------ANAC55(2)           <---------HSFB2a(1)                                                        --------->ANAC58           --------->HSFC1(2)                                             ----------->TBP           --------->HSFB2a(1)                                           ------>MYB46(1) --------->YAB1                                                          ------>MYB83 --------->ANAC58 ------->ANAC58                                            --------->ALFIN1  <---------ARR14(2) ------->ANAC58                                      ----------->HVH21 --------->TOE1(2)        <---- ------->ANAC46                             *TSS<------------CBF ------>ZmHOX2a(1)<-----------HVH21   caagcaaaatcgaagcttctctccaaaattttcaaatattgaattcgtcaaattgatgacagtggtcctgaaacctacaaatatggtcacgaaaacgagt  12143900                                             <----------DOF2             <-------GAMYB                                       <---------AHL20(1)               --------->MYB111(2)                                       --------->AHL20(1)               <---------MYB46(3)                                       <---------ICU4                   --------->MYB55(2)                                       --------->ARR11(3)              <--------P                                       <---------ARR11(3)             <-------GAMYB                                    --------->AHL20(2)           --------->DAG2               -------       ---------->DOF2              --------->YAB1           --------->YAB1                --------->ICU4 <<<<<<<<<<<<WRKY18            ------------>CBF            --------->AHL20(2)        <---------WOX13(1) ---------->DOF2    ---------->DOF2<---------ATHB12     --------->AHL20(2)         --------->ATHB12 -----ZAT6 ------------>CBF---------->DOF2<---------AHL20(2)<---------AHL20(2)    <---------YAB1   gtcaaaagtcaaagtcaatgtcaaaagctaaaagtcaataatattttctttgttcacattatataataagggggttgttgaatattgattggaatgttga  12144000                                                         <---------At4g35610                    --------->DAG2                       --------->At4g35610                <------ZmHOX2a(1)                      <-----------RAV1(2)            ---------->DOF2--------->YAB1        <----------CDC5          ---------->DOF2            --------->MYB52(1)                 <---------ANAC46        --------->ANAC58    <---------ICU4 ---------->DOF2          ----------->TGA1           --------->ANAC58     <-------- -->WRKY38(1) <---------TOE2(3)             ----------->HVH21     <------ZmHOX2a(1)    ---------->DOF2   ctcagataatgacataaaggataaagtattcatagaatcaaacccagtgacgcagaggcagatggagaggaacaagaaaagtattgggctaaagtgtcag  12144100                                               --------->KAN4(2)                                           <---------At4g35610                                      --------->ZAT2                                      ---------->DOF2                                      <---------At4g35610                      ---------->DOF2                                      --------->At4g35610                    <---------ATHB12                             <---------YAB1--------->At4g35610              --------->ANAC58   <---------AHL20(2)       <-----------HVH21 <----------TaMYB80            --------->ANAC58   --------->AHL20(2)   <----------DOF2  ---------->CDC5                   --------->WOX13(1) ---HVH21        <-----------GT1      <---------ZAT2              <-------TEIL--------->YAB1      ---   tgtcattaatttcacaaataaaccggcttttgtcataggctgctcagcacattcccagactatacatatacatttggcaatcaaagcattgtaaaagcct  12144200                                  <---------MYB52(1)                                               <-                                 <-------GAMYB                                                     <-                              <-----------GT1          <---------AHL20(2)       <-------GAMYB      <-       --------->MYB52(1) <----------DOF2       ---------->ID1     <---------ICU4        <---------ANAC55(2) ------->DOF2            <---------DAG2     <---------MYB52(1)    <---------ATHB12       --------->ANAC55(2)   aaaagaaaaaaacagaagattagcataccttttttcgttgtgttctgttcgtctcaatttatagcctaatcagtgtctcttgggttgagtcatgtaagaa  12144300  Previous    Next  AGI:  At4g23190.1    Description:  CRK11 (CYSTEINE-RICH RLK11); kinase. Identical to Cysteine-rich receptor-like protein kinase 11 precursor (CRK11) [Arabidopsis Thaliana] (GB:Q9ZP16;GB:O65471); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23300.1); similar to protein kinase [Arabidopsis thaliana] (TAIR:AT4G23260.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63725.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein Range:  from: 12141043    to: 12143844    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g23205.1    Description:  other RNA Range:  from: 12144254    to: 12144969    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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