Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <----------DOF2  <------MYB83 --------->ICU4                    <---------ANAC58  ----------->GT1    <---------YAB1              <---------ANAC46                  ---------->DOF2  <------MYB46(1)   <---------ARR11(3)           <---------ANAC58            <---------ARR11(3) -----------RAV1(2) --------->ARR11(3)    <---------ZAT18  <----------DOF2   <---------GLK1(2) ---------ANAC46 <---------GLK1(2) <----------DOF2      <-----------GT1      --------->ARR11(3)   tggcaggttaacttgtaaagattatctttgaatttttcttttagggctcttccttgtttaactttacaactgtgtattagatttttaaagtcattttttg  12129100                                                         --------->AHL20(2)        <----------DOF2                         <-----------GT1  --------->ANAC58                <----------DOF2 --------->ANAC46 --------->AHL20(2)  --------->ANAC46=============================HOX2a_HOX2a ---------->DOF2  --------->ANAC58<------ZmHOX2a(2)     ------>ZmHOX2a(1)<---------AHL20(2)                      ----   aaacaaggaactttacttagatcagtcccaatctctcttttcctcacaatttacgacatttaaaagaaaaaaaatcgcttacattgactactgacttagt  12129200                     --------->ANAC46                     --------->O2                     --------->ANAC55(1)                     --------->ANAC55(2)                --------->ANAC46             --------->ARR14(2)          <---------ANAC46        ----------------------->TaNAC69(2)        <-----------HVH21      --------->MYB46(3)      --------->DEAR3(2)                                                                 ----------->GT1    --------->MYB52(1)      <---------ICU4                   <---------ALFIN1     --------->ANAC58  --------->MYB46(3) --------->ANAC58                    --------->At4g35610      --------->ANAC58  <---------MYB52(2) --------->ANAC58            <---------YAB1                   --------->ANAC46 ------->GT1 <---------ARR14(2)     <-----------HVH21    <---------At4g35610   <---------ATHB12<-----   cgtaacaaaccgtcgtatacttcacgttactcagtactagtcagagagagtatcatggaagctccacgatgagaaactcaaatcaaggaactcgaaaaaa  12129300                                                    <---------TOE1(3)                                                    <---------YAB1                                                    <---------TOE2(3)                             ------->TEIL        <---------YAB1                          <---------YAB1        --------->AHL20(1)                              <----                          <---------ANAC55(2)  <---------ICU4                                   <----                          <---------ANAC46    --------->ICU4          <------------CBF    <------MYB83                   ------>ZmHOX2a(2)       --------->AHL20(2)        --------->ATHB12     <------MYB46(1)                 --------->ARR11(3)      ----------->GT1            <---------AHL20(2)   <---------AtMYB61 -----ID1        <---------ARR11(3)  ------------>CBF     <---------ANAC46               --------->MYB59   acaaaaccatgtcttctctgatcttattatgtatatagtttcaatgtaaatattatggttttgtataggtttaattggagtctgtataggtttggtttag  12129400                                                          <-----------GT1                                   ----------->TBP     <----------DOF2                            <--                           <---------WRKY12         ------->TEIL                                 <---                           <---------WRKY38(1)     <---------CCA1(2)                   <-------------            <---------AtMYB61     ------->TEIL <------------CBF                       <-------------- -----At4g35610         ----------->GT1     ------------>CBF                   <------------CBF  ---- -----ZAT2<----------DOF2<-----------HVH21 --------->ANAC46           --------->YAB1  <--------------   ctggtttagaggctttggtttaggcctggtcaaatgtatataaacccacaattgtatcttttaccagattaatgagaatgagattgtttactaatatggt  12129500           <---------ANAC58           <---------ANAC58          --------->HSFB2a(1)          <---------HSFB2a(1)          --------->HSFC1(2)                                                        <---------ZAT18       <---------At4g35610                                                          --------->ZAT14 --------->At4g35610                                                        --------->HSFB2a(1) -------At4g35610      XXXXXXXXXXXXXXXXXXXX>MIR776                          <---------HSFC1(2) ------ARR14(2)   <---------ARR11(3)                                        --------->HSFC1(2) --AGL15  <---------HSFC1(2)                                      --------->bZIP60(1) ---AGL1<---------GLK1(2)<---------At4g35610                      <---------bZIP60(1)              <- ----->ARR14(2)<---------ALFIN1                           --------->YAB1   ------->TEIL--------->ANAC46 ---AG --------->At4g35610        --------->YAB1 <---------At4g35610  ----------->RAV1(2)--------->ANAC46   atctgatgcagatgcttccacatcttcatcttccattgatattatgccttctgctaatattcaaaatgatgtccctgaaccttctgttcacacatcgcat  12129600                                                                 <---------YAB1                                                               --------->YAB1 --------->ARR14(2)        ---------->DOF2                              <----------DOF2        <---------TOE1(2)      --------->ANAC58                  --------->WOX13(1)    <---------ATHB12<---------GLK1(2)     <      --------->ANAC46          <---------YAB1  <---------HSFC1(2) <---------ARR11(3)         -------      --------->ANAC58     <---------ICU4       --------->HSFC1(2) --------->ARR11(3)        -------- -----ZmHOX2a(1)  <---------CCA1(2)  <-----------HVH21  <-----------GT1 <-----------GT1  <---------YAB1   aggagaacacgaaagcctgcttatcttcaagattactactgtcattcagtagcttctttaaccattcatgatatttcccagtttctctcttatgaaaaag  12129700                                                                                         <---------ANAC58                                                                                        <---------AtMYB61                                                                                        --------->ALFIN1                                                                                      --------->ALFIN1                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                   <---------AtMYB61                                                                                 <---------ANAC46                                                                                 <-----------RAV1(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC58      <----------DOF2                                         ---------->DOF2<---------ANAC58      <---------DAG2--------------------->WRI1               <---------ATHB12<---------ANAC58   <---------ALFIN1<---------ANAC58                      ------>MYB83        <---------ANAC46 -----------GT1    <---------ANAC58              --------->ANAC46   ---------->DOF2--------->ALFIN1 -->DAG2        <----------DOF2    ---------->DOF2     --------->TOE1(2)   --------->ARR11(3) -->DOF2<-----------GT1 <---------ANAC46 ---------->DOF2 ------>MYB46(1)<---------GLK1(2)<---------ANAC58   tttctccactttaccattctttcttggtttgtattgccaaagctaaagaaccctcaacctacaatgaagcgaaagaatttcttgtgtggtgtggtgctat  12129800                                          --------------->AtSPL3                                          --------------->AtSPL8                                        <---------ARR14(2)                                        --------->GLK1(2)                                        --------->ARR14(2)                                       --------->GLK1(1)                                       <---------GLK1(1)                            <---------ANAC58                                <---------TGA1a                                     <---------ANAC58                                --------->O2                              <---------ANAC58                                <---------O2--------->ZAT14  --------->YAB1         <---------ANAC46                                --------->TGA1a        ------>MYB83       <---------ANAC58      -----             --------->ZAT18  <---------ALFIN1         ------>MYB46(1)   <---------MYB46(3)  --------   ggatgatgaaattggtgcaatggagactactcacacttgggaaatctgtactctacctcccaataagaagcctattggttgcaaatgggtgtataagata  12129900                                          <-------GAMYB                                          <---------ANAC58                                         <------MYB46(1)                                         <------MYB83                                         --------->MYB55(2)                                         --------->MYB52(2)                                         <---------MYB46(3)                                         <---------DEAR3(2)                                        <---------AtMYB61                                        --------->MYB55(2)                                       <---------MYB52(1)                                       <---------MYB55(1)                                      <-------GAMYB                  <------MYB46(1)                         --------->TOE2(3)<---------ANAC58           <------MYB83                        ----------->GT1<--------P             --------->At4g35610                       ------->TEIL --------->ANAC58          <---------ZAT2                       <---------TOE1(3)<---------MYB46(3)    --------->ZAT2                    -----                 --------->ATHB12   --------->ANAC58        --------->ANAC46   <---------AHL20(2) ---->AHL20(2)  <------NtERF2     ------------>AtMYB77    --------->ANAC46     --------->AHL20(2) --->GT1       ------>NtERF2   --------->ANAC46    ----------->GT1<------ZmHOX2a(1)      <----------DOF2   aaatacaactcggatggcaccattgaacgttataaggcacggttggttgccaagggttacacacagcaggaaggtatcgattttattgagactttctctc  12130000  Previous    Next  AGI:  At4g23160.1    Description:  protein kinase family protein. Identical to Cysteine-rich receptor-like protein kinase 8 precursor (CRK8) [Arabidopsis Thaliana] (GB:O65468); similar to CRK6 (CYSTEINE-RICH RLK 6) [Arabidopsis thaliana] (TAIR:AT4G23140.2); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23150.1); similar to CRK6 (CYSTEINE-RICH RLK 6), kinase [Arabidopsis thaliana] (TAIR:AT4G23140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83990.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103); contain Range:  from: 12129496    to: 12134198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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