Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->GLK1(2)                                        --------->HSFC1(2)                                        --------->KAN4(1)                                        <---------HSFC1(2)                                        <---------HSFB2a(1)                    <---------ANAC58                                ----------->GT1                                <---------ANAC58                               --------->DAG2                               <---------MYB52(1)                              ---------->DOF2          --------------->AtSPL8  <---------ANAC46                       <---------AHL20(2)--------->KAN4(2)                 <-------GAMYB                     --------->ANAC55(2)<---------KAN4(1) <-----------GT1 <---------MYB46(3) --------          --------->ANAC46<---------WOX13(1) <---------YAB1      <---------CCA1(2)        ------>ZmHOX2a(1) ------->GT1       <---------AHL20(2)   --------->HSFB2a(1)------->TEIL   <---------DEAR3(1) <-------   agtcaaaactacacaaaacatttacttaattgaaaagttagaacattctgataaatgtatgaacctcttatcttcgtcgttgcgttcttctcctagttct  12051400                                   ----------->GT1                                   --------->ANAC58                        <---------At4g35610                        <---------ZAT2       <----------ID1          --------->GLK1(2)        --------->ANAC58         <---------ARR14(2)       --------->DAG2                                  --------->TOE2(3)         <---------GLK1(2)       ---------->DOF2                           --------->YAB1       -----         --------->ARR14(2) ----------->GT1  --------->ANAC46             <---------ATHB12    ------- ->ARR11(3)             --------->At4g35610  --------->ANAC58     <---------ARR14(2)        <-------- --ARR11(3)             --------->ZAT2       --------->ANAC58     --------->ARR14(2) ---------->DOF2   tgatgaattcagattctgttcaatccagctaagtaaaaagcaaaaacacgacaaaatcgaaatgagcgaaatcgcaatcgtaaacatcaaagagaacaga  12051500                                                  --------->TOE2(3)                                         --------->ATHB12                                      ---------->DOF2    -------->P                                --  --------->ARR11(3)                 <---------AHL20(2)--------->MYB46(3)          <---------ARR11(3)  --------->GLK1(2)                  --------->AHL20(2)<---------MYB111(2)         --------->ARR11(3)  <---------ARR11(3)             --------->AHL20(2)  <-----------GT1               --------->GLK1(2) ------>GT1                     <---------ATHB12  <----------DOF2            ----------->GT1    <---- ---->GT1                 ----------->RAV1(1)     --------->TOE1(3)       <-----------------------TaNAC69(2) -ZAT14                --------->ANAC46<---------TOE2(3)------->GAMYB    --------->CCA1(2)  <--------   gaaaaatcttcttaatttgaagaaaaccccacaaatgaattaaagattgaaactttaacaacctctgtgaacaagagacgagaaaaatctagagaatatt  12051600                                                                                   <---------At4g35610                                                                          <---------DAG2<---------At4g35610                                                                          <----------DOF2       -----                                                                        <------NtERF2   --------->At4g35610                                                                        <---------At4g35610   <------                                                                        --------->At4g35610  --------                                    <---------RVE1(1)                 --------->ATERF1(1)   <--------       --------->ARR11(3)           <---------CCA1(1)                 <------NtERF2--------->ZAT2       <---------ARR11(3)          --------->ARR14(2)                ------>NtERF2 --------->At4g35610   ---------->DOF2                 <---------ARR11(3)               <---------RAP2.3(3) <---------ZAT2 ------->ZAT6                      --------->ARR11(3)               <---------PCF5 <---------ZAT2 -------GT1                <--------P       <-----------RAV1(1)  <-----------RAV1(1)  <-----------RAV1(2) ---ARR10         ---------->DOF2  <---------ARR14(2)  ----------->GT1<---------RAP2.6(2)   ---------   acctctaaagttctcagagagaaagagaggtagcccagatatttctatgtcgcaaaattgtaaatttttggggccgctttctctaagctcagcagataca  12051700                                                                                   >>>>>>>>>TBF1                                                                            ---------->DOF2                                                                       ---------->DOF2                                                                   <---------------AGL15                                                                   --------------->AGL15         <---------YAB1                                           ----------------->AG        <---------AHL20(2)                                        <-----------------AGL3      <---------YAB1                        ----------->GT1       ----------------->AGL2 ---->TOE2(3)                            ---------->DOF2          <-----------------AG --------->GLK1(2) -TEIL<---------AHL20(2)        --------->ARR14(1)                ----------------->AGL3 ->CCA1(2)      --------->YAB1  --------->CCA1(2)                 <-----------------AGL1 -ARR14(2) --------->AHL20(2)  <---------ARR14(2)                 ----------------->AGL1      ------- >ARR14(2) <---------AHL20(2)  --------->ARR14(2)               ------------------------>ANAC81 -----   ttagaaatattattttaatgagagttgaattgggatacggtgagaaaggaaacaaaattggagaagaaaccaaaaaaggaaagaagaagaatcagagagt  12051800                                     <-----------TBP                                 ----------->GT1                              <-----------GT1                                                 <------                          --------->AHL20(2)                                       <------------CBF                        <-----------TBP                                            <----------DOF2                        --------->AHL20(2)          --------->ALFIN1             --------->ZAT14    -       *TSS           <---------RVE1(1)          --------->ALFIN1       --------->REM1(1) <---------ANAC46  <---------ANAC46   <---------GLK1(2)          <------ZmHOX2a(1)   <---------At4g35610   <---------PCF2 -->ALFIN1           <---------ARR11(3)   <---------TOE2(3)         --------->At4g35610<---------ANAC46 ---->ALFIN1         --------->ARR11(3) ---------->DOF2    --------->CCA1(2)     <---------ZAT14 ----   ggctctgtgtaatcacgttcgaagatttttatatacggtttataaaggaaggaggtggaagataagagtttgctgcatcactgtgcattgtggggtctat  12051900                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             --------        ----------->HVH21                                                             ------>NtERF2        <---------SPL7                                  <---------ZAT14              <---------bZIP60(1)       --------->ETT(1)                                 --------->ZAT14             --------->RAP2.6(3)      --------------->AtSPL8              <---------ARR11(3)                       --------->MYB52(1)     <-----------HVH21                    --------->ARR11(3)    ----------->GT1   ----------->TGA1    <-----------RAV1(1)              --------->AHL20(2) <---------ZAT18           ----------->HVH21 ---CCA1(2)                      --------->ICU4         --------->ZAT18         <---------AtLEC2 -------->ATHB12                --------->ARR11(3)     <---------ZAT6    <---------YAB1<------NtERF2 ----->YAB1   <----------DOF2 <---------TOE2(3)       <---------------AtSPL8    --------->YAB1<------   cttcatttgtcggaccctttcttctggttattgagataatgaattatcttggtaatagtgtacattctgttaaatatgattttcatgacggcaaaataaa  12052000     <-----------ARR10     <---------ARR11(3)     --------->GLK1(2)            <---------AHL20(2)     --------->ARR11(3)           --------->AHL20(2) ---AHL20(1)                   --------->YAB1 -->AHL20(2)           <-----------GT1 -->AHL20(1)       --------->AHL20(2)                               --------->ANAC55(2) --AHL20(2)        <---------AHL20(1)                     <---------REM1(1) ->AHL20(2)        <---------ARR11(3)                     --------->ALFIN1        --------->CCA1(2) ---AHL20(2)       --------->AHL20(1) <-----------------AGL3        <---------ANAC55(2)   ttcagaaaatctcattctctatatattacagaataataaaactgaatttggcatcaagaggtgtagtatcacatattgaagaagatagacaagtttgaat  12052100                                                           --------->AHL20(2)                  ----------->GT1                         --------->AHL20(2)                ---------->DOF2                           <---------AHL20(2)                  <------           ---------->DOF2                      ----------->GT1       <----------DOF2   <---------ATHB12       --------->ANAC46              --------->ICU4    <---------AHL20(2)      --------->AHL20(1)       --------->ANAC58         --------->CCA1(2)     <---------AHL20(2)       <---------AHL20(1)       --------->ANAC58        <---------ARR11(3)     --------->AHL20(2)       <---------ARR11(3) --------->At4g35610   ---------->DOF2        ---------->DOF2     ---------->ID1   <-----------GT1   attagcttcacgaaaaagaaaagaaaaaagatagatataagtattatgcaaagttattaaataattttgtttctttttcaatatttttcaatctttcttt  12052200                                                                                                   <-                                                                                                   <-                                                                                                 <---                                                                                                 xxxx                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                        <-----------ARR10               xxxxxxxxxxxxx                                              --------------->AGL15                 <xxxxxxxxxxxxxxxx                                             ========================================================                                             ----------------->AGL3             <xxxxxxxxxxxxxxxxxxxx                               --------->ATHB12         --------->GLK1(2)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            --------->ANAC55(2)------>ZmHOX2a(1)              xxxxxxxxxxxxxxxxxxxxxxx   ----------->GT1        <-----------GT1 <----------DOF2                     xxxxxxxxxxxxxxxxxxxxxxx ----DOF2       --------->AHL20(2)   ---------->ID1    <---------GLK1(2)   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   tctaaatgtaaaacataagtaaatgtttttacatgatttgtctcctttcctagtatagaatctaatctacaatctgaagaagatggtatggcctagtatc  12052300  Previous    Next  AGI:  At4g22990.1    Description:  SPX (SYG1/Pho81/XPR1) domain-containing protein. similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G11810.1); similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63010.3); similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63010.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO24466.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63492.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63654.1); contains InterPro domain SPX, N-terminal (InterPro:IPR004331); contains InterPro domain Maj Range:  from: 12048197    to: 12051807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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