Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->LBD16                       --------->MYB52(1)                       -------->P <---------HSFB2a(2)                      ------->GAMYB--------->LBD16                     <---------MYB55(2)                     <---------MYB111(2)                     <---------MYB52(2)                     --------->MYB46(3)<---------GLK1(1)       ------>ZmHOX2a(1) ------->GAMYB--------->ARR14(2)                --------->TOE2(3)     ----------->RAV1(2)<---------LBD16--------->GLK1(1)                --------->TOE1(3)     ==========================RAV--------->HSFB2a(2)                <---------ARR14(2) ------>At4g35610  ----------->RAV1(1)<---------ARR14(2)             <---------GLK1(2)           <--- ------>GLK1(1) ------>NtERF2     <---------LBD16                    --------->ARR14(2)      <------- --->TEIL       --------->LBD16   <---------ANAC46                <---------HSFB2a(2)  <---------ARR14(2) --->LBD16    <---------LBD16    <---------LBD16            <---------GLK1(2)          <---------ZAT14 -->ANAC46 --------->MYB46(3) <---------GLK1(1)--------->YAB1     --------->HSFB2a(2)  --------->ZAT14 --LBD16  ------->TEIL--------->MYB55(1)     <-----------HVH21   <---------LBD16       --------->ARR14(2)   atctccatcctgaacctccggcaacaaccgggacttccgggatttgctatcagagcctcttagcttctccagaaccttaaacgcttcagtatacacattc  12043200                                  ------>ZmHOX2a(1)                 --------->ANAC46                                 --------->TOE1(3)                  --------->ANAC58                                 --------->TOE2(3)                  --------->ANAC58                               <---------YAB1                 <---------ANAC58                           ------->TEIL                       <---------ANAC58 ------YAB1             <---------ATHB12                 --------->ALFIN1     <---------At4g35610 --GLK1(2)  <---------ATHB12 --------->YAB1            --------->ALFIN1       --------->At4g35610   tcatacaaaccccaaacatcgagacaatgaatcatccttagcctctgagattgaacagtgtgaggcttacaagctaattgagcagagaccaattctaaac  12043300                              ==============================HOX2a_HOX2a                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <---------AGP1                            --------->ARR14(2)                            <---------ARR14(2)                            --------->AGP1                            <-----------ARR10                    --------->ANAC58                    --------->ANAC58                    --------->ANAC55(1)                          <---------HSFB2a(2)                    --------->ANAC55(2)                      <---------ARR14(2)                    --------->ANAC46                 ------>ZmHOX2a(1)                    <---------ANAC55(2)             --------->TOE2(3)                   =============                   <---------LBD16                  <---------ANAC58                    <------ZmHOX2a(1)                --------->ANAC58          <-----------GT1--------->YAB1                <------MYB46(1)                --------->ANAC58     <---------YAB1 <---------ANAC58 <---------ANAC46  <------MYB83               <---------ICU4===============================HOX2a_HOX2a       <---------HSFC1(2)<----           <-------TEIL     --------->ARR11(3) --------->At4g35610----------->HVH21  <--------P =====      ---------->DOF2       <---------ARR11(3) --------->ZAT2--------->ARR14(2)     <---------MYB52(1)   agtccaaacaaagttcataagcacggaacagatctaatgctgattcacgagcttccttatcagaattcgcgacggagagacgtttcggtaggagagagat  12043400                                                                    --------->LBD16          ---------->DOF2                         <---------ANAC58  --------->HSFB2a(2)         <------ZmHOX2a(1)                        <---------ANAC46  <---------HSFB2a(2)       <---------TOE2(3)                          <---------ANAC58 <---------HSFB2a(2)  <---------MYB46(3)                           <--------P          --------->HSFB2a(2) ==HOX2a_HOX2a          <---------ANAC58      <-------GAMYB        <---------ANAC46 --ZmHOX2a(2)           <---------ANAC58     <---------MYB46(3)    <---------LBD16               <--- ===============HOX2a_HOX2a             <---------ARR14(2)        <---------LBD16                <---   cgatttgttgaggaaaggaaggaattgcttagctagggctcgaatcgtggttgctcggtcttgttttttccgggaagtggatagagtagagaaaggttta  12043500                                                                           ------>NtERF2                                                                          --------->ANAC46                                                                          --------->RAP2.6(2)                                                                          --------->ANAC58                                  <---------O2                           --------->SPL7                                  <---------TGA1a                       <------ZmHOX2a(1)                                  --------->TGA1a                    --------->At4g35610                                  --------->O2                       <---------At4g35610                                 <------NtERF2                     <-----------RAV1(2)                                <---------DDF1                    <------NtERF2                                ------>NtERF2                    ------>NtERF2                                <---------ATERF1(1)             --------->ETT(2)                               ----------->HVH21               --------->ATERF1(1)                               --------->DEAR3(1)              <------NtERF2                              --------->RAP2.3(1)             <---------ATERF1(1) ------TOE2(3)          --------->ICU4                       <---------DEAR3(1)  --------->ATHB12  <- ------TOE1(3)       <---------ARR11(3)                  <---------AtMYB61--------->ANAC58         --   aggtaatcggagaaggaagagaagacattatcgccgacgtcgatgagagagagaagacggaggtcgtcgccagaggacgccattgatttcgaaattttga  12043600                                                                                          <---------ANAC58                                                                                          <---------ANAC58         <------------CBF                                                                 <---------ANAC46     --------->LBD16                                                                   --------->ZAT14    --------->ANAC46                                                       <---------MYB52(1)  ------    --------->LBD16                                                      <---------MYB46(3)  --------   <---------LBD16          --------->HSFB2a(2)                  <---------ARR11(3)   <---------DAG2- --------GLK1(1)    ------->TEIL               <-----------HVH21 --------->ARR11(3)   <----------DOF2 ------->GLK1(1)  <-------TEIL <---------ARR11(3)               <---------GLK1(2)<-----------GT1    <   gagttcccgctaattgaagatgcacattttctaggtcttacacagtttcagtcacttctaatttcaaaatctcattcgttgattcacactttacttgtag  12043700        --------------->AGL15        <---------------AGL15       <---------YAB1       ----------------->AGL2       ----------------->AGL1  <---------ARR14(2)                 --------->MYB46(3)       ----------------->AGL3  --------->GLK1(2) --------->ARR11(3)     <-----------GT1--------->YAB1               <---------ARR11(3) --->ETT(2)       --------->GLK1(2)         --------->HSFB2a(2) --------->ARR14(2) ->REM1(2)       <---------ARR14(2)         <---------HSFB2a(2) <---------ARR14(2)<---------YAB1 -------->ZAT14  --------->ARR14(2)------>ZmHOX2a(1)       <---------LBD16  <---------ANAC46 ---------ZAT14  <---------GLK1(2)--------->TOE2(3)    <----------DOF2 <---------ZAT18    ---------->DOF2   actgtagttaccatttgcagaatcgtagtgaagaatcctaaaccctctagagatgttctttcgcggtatccactgggctcgtgtatgattttaaaagccc  12043800                                                                                                -----                                                                                                -----                                                                                            -------->P                                                         <---------At4g35610               --------->MYB52(1)                                                   --------->AHL20(2)             ----------->GT1                                                   --------->ATHB51           ------------>CBF-------           ---------->DOF2                      --------->YAB1              --------->MYB46(3)<------ <---------YAB1     <---------MYB52(1)      ---------->DOF2         ---------->DOF2      <---------MYB52(2)   attatgtttttgaaaaaggcccgtttttgtttaagcaggtttacagcaaagaataatttagctactgcctaaaatcgaaccacaatgtaaaactaaccga  12043900                      <---------------AtSPL8                 --------->LBD16                <---------------AGL15                --------------->AGL15               <-----------------AGL1                                             <---------ICU4               ----------------->AGL2                                             --------->ATHB12               ----------------->AGL1                                             <--------HAHB4               <-----------------AGL2                   --------->AHL20(2)       <---------ATHB12               <-----------------AG                 <---------TOE2(3)           ------>MYB46(1)               ----------------->AG             --------->ARR14(2)              ------>MYB83 ->MYB46(1)  --------->ARR14(2)                 <---------ARR14(2)             --------->WOX13(1) ->MYB83     --------->GLK1(2)                --------->LBD16              --------->ZAT6 >GAMYB      <---------ARR14(2)             <---------LBD16              <-----------GT1           -- ---MYB59--------->YAB1----------->GT1 --------->MYB46(3)   <---------------AtSPL8--------->YAB1   <-   actaaaccgaatcaaaatccgaaaatggtaaaaaaaactgaaccaatgcggattgagattatatggttcacaaattaacaccaatcatttgtttttgtca  12044000            <---------ALFIN1                                                    --------->TOE2(3)  <----------DOF2                                                   --------->TOE1(3) ------->ARR11(3)                 --------->YAB1  --------->ANAC46  --------->TOE2(3)   <-------TEIL --------ARR11(3)   <----------DOF2 --------->At4g35610          <---------ALFIN1------>ZmHOX2a(1)   agagctttcattctccacttctctttctcaacaaaatcagcatccaaaaacctcgacacaaactcccaaaccttaaaaacatcctcaaaattcgtcataa  12044100  Previous    Next  AGI:  At4g22970.1    Description:  AESP (ARABIDOPSIS HOMOLOG OF SEPARASE); peptidase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28550.1); similar to hypothetical protein OsI_008917 [Oryza sativa (indica cultivar-group)] (GB:EAY87684.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24773.1); similar to hypothetical protein OsJ_008245 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24762.1); contains InterPro domain Peptidase C50, separase; (InterPro:IPR005314) Range:  from: 12033448    to: 12043583    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g22980.1    Description:  similar to catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] (TAIR:AT5G51920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63651.1); contains domain PTHR14237 (PTHR14237) Range:  from: 12043977    to: 12045712    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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