Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                        <---------ZAT2            <--                                                                        --------->HSFC1(2)        ---                                       --------->ANAC46                 --------->ZAT2      ---------                                       --------->ANAC58                 <---------HSFC1(2)  ---------  ---------->DOF2                      --------->ANAC58                ------->TEIL         --------- -------->YAB1                ------->GAMYB                         --------->ANAC46       <---------LBD16 --------ATHB12            ----------->RAV1(1)                 <----------DOF2       --------->AHL20(2)   aatcaaaagcttcaatatttcagaaataacaacagaacaaaacgccactaaatacagagagactcctttcacgaagcttggatacaattttttcacgcga  12018100             <---------ZAT14             --------->ZAT18    <---------ANAC58    <---------ANAC46    --------->ANAC55(2)    <---------ANAC55(1)                                                                             <    <---------ANAC55(2)                                                                           ---    <---------ANAC58                                           ---------->DOF2                    <-- ---------ANAC58                                          --------->AHL20(1)                 <------- ---------ANAC58                      ----------->GT1     <---------AHL20(1)                <-------- -------ARR11(3)             --------->YAB1              --------->AHL20(2)                 <-------- ------>ARR11(3)       --------->TOE2(3)             --------->AHL20(2)                     <-------- >ANAC46     --------->SPL7 <---------ATHB12         <---------AHL20(2)                 <----------DOF2 >ANAC58     --------->ZAT14<<<<<<<<<ARR2   <----------DOF2  <---------AHL20(2)   <---------DAG2 <--- >ANAC58 --------------->AtSPL3 ---------->DOF2 <---------TOE2(3)                 <----------DOF2----   gttcttgcgtgttcgtacactgaaaccacaatcaaaaagattgtaactttaagaaataaatatataaaagacccaaaatttgagcttttcctttgcttga  12018200                                                    <---------TOE1(3)                                           --------->LBD16                                          <---------LBD16                                          --------->HSFB2a(2)                                      ==============HOX2a_HOX2a   <---------ANAC46                   ------>ZmHOX2a(2)   <---------ANAC58                  ===============HOX2a_HOX2a                   <---------ANAC58   <---------ANAC58                  <------ZmHOX2a(2)                        <------MYB83 ---------WOX13(1)                  --------->AGP1  <---------TOE2(3)         <---------MYB46(3) ------>ATHB12                      <---------ARR14(2)             --------->ANAC55(2) -------ICU4                        --------->ARR14(2)             <---------ANAC58 --WOX13(1)                         --------->ARR14(3)             <---------ANAC55(1) -ANAC58                            <---------ARR14(3)             <---------ANAC55(2) -AtLEC2                            --------->ARR11(3)             <---------ANAC46         --------- -ANAC58                 <-----------GT1  <---------HSFB2a(2)      <---------ANAC58   <---------ANAC46 ------YAB1  <---------AtMYB61      <---------ARR11(3)    <----------DOF2     <------MYB46(1)       < ----->ICU4<----------DOF2   <----------DOF2 <------ZmHOX2a(1)   <---------ANAC46 <---------ANAC58  <   tgattgcttgaagctttggttttgaattttccttttgagatcttccaggaatttagggttctttgtgatgcgtattgagttggttcttgtgtttaaaagg  12018300                                                                              ------->MYC4                                                                              ------->PIF5                                                                              ------->MYC2                                                                              <-------MYC2                                                                              ------->MYC3                                                                              <-------MYC3                                <-----------ARR10                             <-------PIF5                                --------->ARR14(2)                            <-------MYC4                                <---------ARR14(2)                           <---------O2                            ----------------->AGL1                           <---------ANAC46                          <---------ZAT18                                    --------->TGA1a                        --------->LBD16                                      <---------ANAC55(2)                 <---------ALFIN1     --------->ZAT14                        <---------TGA1a               <-----------GT1  --------->GLK1(2)                            <--------ABF1      <----------DOF2  <---------ANAC55(1)                                   --------->O2      <-----     <---------ANAC58  <---------ANAC58        --------->HSFB2a(2)           --------->ANAC55(2)    -     <---------ANAC58  --------->ANAC55(2)  ===========================================bZIP_DOF<----- ->DOF2   --------->ANAC55(2)  <---------CCA1(2)                           <---------ALFIN1    <----- -----------RAV1(1)    <---------ANAC46     <----------DOF2     --------->ANAC46          <---------ICU4 ---------MYB46(3)     <---------ANAC58--------->ZAT6  <-----------GT1   <----------------PIF3(2)   <   gattgttgcttcacgtttcacacttccgtgcccaaatctgaacactcttttggaatttttctgaacacgagagagtgccacgtgttctctaatctttgca  12018400               <---------RAP2.6(3)               <-----------TGA1              <---------TGA2(1)              --------->bZIP60(1)          <-------MYC3          ------->MYC3         --------->O2         ================================================MYC_MYB         ==================================MYC_MYB         <---------O2         ================================================MYC_MYB                               <-----         <---------TGA1a                                                                      -------         --------->TGA1a <---------PCF2      ------->GAMYB                                    -------         ===================================================bZIP_DOF                         <-------         ==================================MYC_MYB           --------->TOE2(3)               <------- ----ANAC58   <---------ANAC46              <------------MYB.PH3(1)                          -------- -------->At4g35610     <------NtERF2       <------------AtMYB77                 ---------->DOF2 ----ANAC58   --------->TGA2(1)--------->MYB46(3)            <----------DOF2  ----------->RAV1(1)  <- ----AtLEC2   <---------bZIP60(1)  ------->GAMYB <----------DOF2             <---------ETT(1)-------- ---------At4g35610   --------->ALFIN1      --------->MYB46(3)               <----------ID1----------   tgagcttccccatgtgtcgtcatggtggggctaacaactggctctaaccgtctttttggataactttagccatctcgttgcgacaaagagacacagattc  12018500                   --------->ANAC58                   --------->ANAC55(2)      ------->GAMYB--------->ANAC58      <---------MYB59   *TSS  ------->TEIL --TEIL ------>MYB83 -->ARR14(1)   <---------MYB52(2) -->GLK1(2)  ------>MYB83<---------ZAT14       ------------>CBF --ARR14(2)  ------>MYB46(1)                  --------->ANAC58            <---------AHL20(2) --GLK1(2) <---------MYB111(1)                --------->ANAC58           --------->AHL20(1) ->ARR14(2)<---------MYB59                  ---------->DOF2              <---------AHL20(1) ----------ARR10   <---------ANAC55(2)    --------->TOE2(3)              --------->AHL20(2) ->ARR11(1)<---------MYB46(2)  <-----------HVH21                         <---------AHL20(2) ->ARR10------>MYB46(1)  --------->ZAT14------->TEIL                ------------>CBF            -----   ggctctaaccgaacctaactcacgtactgtagttgtcagtcgaacctaaagcaatacggtttagtttcggttcaatttaatgtcattcgactcgattact  12018600                                                                       <---------TOE1(2)                                                                       <---------TOE2(2)                                                                      <-----------RAV1(2)                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                  --------->MYB52(1)                                                                --------->MYB46(3)           <-------                                                                <---------MYB55(2)         ==========                                                                <---------MYB52(2)     --------->LBD16                                                              ----------->RAV1(1)  <---------ARR14(2)               ----------->GT1     --------------------->WRI1 ====================RAV<---------LBD16   ----------->GT1            <---------HSFC1(2)           <------ZmHOX2a(1) --------->ICU4<------ZmHOX2a(1) ---------->AGL15             --------->HSFC1(2) <---------ANAC46------->GAMYB     --------->ARR14(2)   cggtttagttattagacctgtgaaactcgagaggcttcttcgcttgaatcgtcgtgaacaaggacaacaaacgcaggtattgatggaaccggaggagtca  12018700                              --------->DAG2                             ---------->DOF2                        ----------->GT1                                                        <-----                     <------ZmHOX2a(1)                           --------->YAB1             <--------                   <---------TOE2(3)                            --------->AHL20(2)          <--------              ------>ZmHOX2a(2)                             <-------TEIL     <-----------------AGL2      <---------TOE1(2)----------->GT1                 <-----------RAV1(2)   <-----------------AGL3 ----HVH21    ==============HOX2a_HOX2a               <-------TEIL     --------->MYB52(1)   <-------- ====================HOX2a_HOX2a                   --------->At4g35610--------->RVE1(1)<---------At4g35610   gagagtcccatgttgatccataaggatgttaaaaagggctgaaatttgtgatcaggtccaggtccattaaaaatatcgggctaaaattgggctggcctgt  12018800                                             <---------ARR11(1)                                             --------->ARR11(3)                                             --------->ARR14(2)                                             ------->TEIL                                            <---------CCA1(2)                                            <---------ARR14(1)                                        <-----------HVH21                                       --------->DEAR3(1)                                       --------->bZIP60(2)                                       <---------O2                                       --------->O2                                       --------->TGA1a                                       <---------bZIP60(2)                                       --------->bZIP60(1)                                       <---------TGA1a                                ---------->DOF2                               <---------MYB52(1)                            <---------TOE2(3)<---------ARR14(2)     <----------DOF2    =========================bZIP_DOF     ============================================bZIP_DOF   <------------------------ANAC81  ----------->HVH21   ----------->RAV1(1) ------HVH21            <----------DOF2<---------bZIP60(1)                                     *TSS -ANAC46           <<<<<<<<<TBF1=================bZIP_DOF                              <----------DOF2 -ANAC58       <-----------GT1--------->TOE2(3)        <----------ID1             <<<<<<<<<TBF1------ -ANAC58    <---------AHL20(2)--------->TOE1(3)<---------ANAC46               <-----------GT1 ------>ZmHOX2a(1)   tacagagcttttatttttttcttcttcttttacgttaagcgacgtcgtatcttgtaaacaacaaaacacgagtactgttttttcttcttctttctccttc  12018900                                                                                             <-------                                                                   <---------ANAC58          --------                                                                   <---------ANAC46          --------                  <----------DOF2                         <---------ANAC46                   <-------             <-----------GT1                   --------->ANAC58    <---------ANAC58     <---------ANAC58       ------>ZmHOX2a(1)       <---------MYB52(1)      <-----------RAV1(1)              <---------ANAC58      --------->TOE2(3)      --------->MYB52(2)--------->ANAC58<----------DOF2  <-------TEIL--------- ------>CBF <---------ATHB12<-------TEIL   <---------REM1(1) <---------ZAT18  <---------GLK1(2)   aatctcttcctcaaatcactctttttggggttcgttttgtttgtgttgtaagcatccctgttgtgcatttcgtttatccaggttcgtattgcttacctaa  12019000  Previous    Next  AGI:  At4g22920.1    Description:  ATNYE1/NYE1 (NON-YELLOWING 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11910.1); similar to putative staygreen protein [Nicotiana tabacum] (GB:ABY19382.1) Range:  from: 12016536    to: 12018503    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g22930.1    Description:  PYR4 (PYRIMIDIN 4); dihydroorotase. Identical to Dihydroorotase, mitochondrial precursor (PYR4) [Arabidopsis Thaliana] (GB:O04904); similar to mitochondrial dihydroorotase [Brassica napus] (GB:ABQ41358.1); contains InterPro domain Dihydroorotase, conserved site; (InterPro:IPR002195); contains InterPro domain Dihydroorotase homodimeric type; (InterPro:IPR004721); contains InterPro domain Amidohydrolase 1; (InterPro:IPR006680) Range:  from: 12018895    to: 12021602    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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