Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->ANAC58                                                                                 ----------->HVH21                     ========================HOX2a_HOX2a                       <---------ANAC58                <----------DOF2                                                <---------ANAC58    <-               <---------ANAC46                                             <----------DOF2       <--               <---------ANAC58                                        <---------LBD16--------->ANAC58  ------->TEIL <---------ANAC58                       --------->MYB52(1) ------>NtERF2--------->ANAC46 <---------CCA1(2)   ------>ZmHOX2a(2)------>ZmHOX2a(1)  ----------->GT1 --------->LBD16     <-------   cttgaatctttccagtggcttgatcgtttgcatacttctccttctcttccacagacaaactgaaaaactcttctccggctttcttgacacgctccattag  12005800                                                                                     <----------DOF2                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   <---------RVE1(1)                                                                                  <---------ARR11(3)                                                                                  <---------ARR14(2)                                                                                  <-----------ARR10                                                                                  ------->TEIL-------                                                                                  --------->ARR14(2)                                                                                  --------->ARR11(3)                                                                               <---------ANAC55(2)              <---------MYB46(3)                                               --------->ANAC58 ----------->RAV1(2)                                                           --------->ANAC46 <---------At4g35610                                            ===========================HOX2a_HOX2a <---------ZAT2                                                 ==========================HOX2a_HOX2a --------->ZAT2                                                 ------>ZmHOX2a(1)<---------CCA1(2) --------->At4g35610                                       <---------At4g35610 --------->ANAC55(2) ----------RAV1(2)                   <---------ALFIN1      <---------ZAT2      --------->ANAC55(1) ----ZmHOX2a(2) <--------P<-------TEIL     ---------->DOF2 --------->At4g35610 --------->ANAC58 ----- --MYB52(1)   --------->ATHB12<---------ALFIN1      <----------DOF2           <---------LBD16 -------   atcagctggtattccatggttgatcaaatgcatcactccccaatccaaagatgcctttttcagctcctcaatacaattctcacggatcttttcatcgtct  12005900                                                        <---------HSFC1(1)                                                        --------->HSFB2a(2)         <----------DOF2                                --------->HSFC1(1) -->At4g35610                                           <---------HSFB2a(2) ------>HVH21                     <------ZmHOX2a(1)<---------------AGL15                 <----------DOF2 ---->RAV1(2)         <---------ANAC46      <----------DOF2<------ZmHOX2a(1)       <---------ARR11(3)   gactcgatgttctttagatcgattgtgggaacttgaggaccgtcttctttcttctcttctaggaaaacatcgttgatgctctcgagctcttcttttggac  12006000          --------->HSFB2a(2)                                   ------->GAMYB       <----------DOF2                                         --------->MYB46(3) <---------ARR11(3)                                       ------->GAMYB<----------DOF2 --------->ARR11(3)                                       --------->ANAC58                          - --------->AHL20(1)                                       --------->RAP2.6(2)                       - --------->AHL20(2)           <----------DOF2             --------->ANAC46                          < <---------AHL20(1)           <---------DAG2              --------->ANAC58            ---------->DOF2 <---------AHL20(2)  <---------YAB1     <---------GLK1(2)--------->MYB46(3)      --------------->AGL15   gaatatattcttttggaatcgatatgattccgctttttgctagactctcaactctttcaaccgcaaccatcttctttagtcttctgtttaaagctaaaac  12006100                                                             --------->AHL20(2)                                                   ----------->GT1                             <----- -------->ZAT14             --------->TOE2(3) --------->MYB52(1)                          --------->ZAT6 -------->At4g35610 --------->AHL20(2)  ----------->GT1  --------->AHL20(2)             <-----------GT1 ---------ZAT14   ----------->GT1      ----------->GT1   --------->YAB1          <-----------GT1   agagcagaaaacagagtaagaagtaaataaacttaaaaacaggggaaaaaacagagtaataaaaaaaatggatttgttttgtttttcttcttacactctt  12006200                                                                                                -----                    *TSS                                                                    ------>MYB83              --------->ANAC58                                                              ------>MYB46(1)        <---------ANAC58                                                                  <---------MYB46(2)        <---------ANAC58                                                                  <---------MYB59       <---------MYB46(3)                                                              <-----------GT1     <---------WOX13(1)                                            <----------DOF2  --------->MYB52(2)  <---------YAB1--------->AHL20(2)         <-----------TBP     <---------ZAT14      <---------MYB46(3) -----DOF2    --------->ANAC58        <----------DOF2      <-----------GT1       ------------>MYB.PH3(2)   ttttgtaattggttgcaagtaaatgaaatgtgcaaagactctttcttatatagcaaagtttttactatacttttagttagaagagtttgttaccgaacta  12006300                                                                                           <---------WOX13(1)                                                                                         <---------WRKY18(1)                                                                  <---------WRKY12      --------->WRKY38(1)                                                                  <---------WRKY38(1)   --------->WRKY12                                                                  <---------WRKY45    <-------GAMYB                                                            --------->MYB52(1)       <---------ANAC46                                                           <---------ZAT14           <------MYB83                                                           <---------REM1(2)        <---------MYB46(3)                                                         ================================MYC_MYB                                                         --------->ANAC46         <--------P                                                         ==================================MYC_MYB                      =============================================MYC_MYB      --------->ATHB12                      <--------P                  ----------->HVH21             <------MYB46(1)                     ==============================================MYC_MYB      <------MYB83 --------                     <-------GAMYB              <---------ANAC58 --------->WRKY18(1)<------MYB46(1)                    --------->MYB55(2)          <---------ANAC55(2)   ------->GAMYB <------MYB83 ----                  <---------MYB52(1)            --------->ANAC55(2)--------->MYB52(1)<------MYB46(1)              --------->MYB52(1)                <---------ANAC46<--------ZAP1   <---------MYB46(3)           <---------At4g35610                  <---------ANAC58<-----------HVH21<-------GAMYB   <---           --------->At4g35610                 <-------TEIL--------->ZAT14      --------->MYB55(2)   <------------CBF <---------MYB46(3)    <--------P     --------->TGA1a       <---------AtMYB61 <--- ---->MYB52(1)-------->P  <---------ZAT6  =========================MYC_MYB   <------ZmHOX2a(1) <-----   agagacattgtagagctaccggtggttagtgctattgttgtgaggtaagtgcgtgactcacttcacggtcaacgggagaggatggttgggttgactgatt  12006400                                                                                                   <-                                                                                                   ==   ---------->DOF2                           --------->DAG2                                   ------- ->ATHB12                                  ---------->DOF2                                    <------ ------->GT1                            --------->LBD16                          <-------MYC3 <------ ---MYB83                             <-----------------AGL1        --------->ATHB51          <------ ---MYB46(1)           <---------ANAC58--------->HSFB2a(2)          <---------ICU4        <---------- ----WOX13(1)          <---------ANAC58<---------HSFB2a(2) --------->AHL20(2)    ------->MYC3 <------   ggtcaaaaagattactactatatgggcttgggtctagactcccagaaaaggcccaatagaattaaacccataatcgctatcaacgtgttcttcgtcgcgt  12006500                <-------MYC3                ------->MYC3                ------->MYC2                ------->MYC4                <-------MYC4                ------->PIF5                <-------MYC2                <-------PIF5               ===================================================bZIP_DOF               ======================================MYC_MYB               =======================================MYC_MYB               --------->ANAC55(2)               <---------TGA1a     <---------ANAC58     <---------ANAC58 ---------DOF2 --------->TGA1a ========================bZIP_DOF                      --------------->AGL15 -->ANAC55(2)  --------->O2                   ------->GAMYB ---ANAC55(2)  <---------O2                  --------->MYB46(3)           --------->WOX13(1) ---ANAC58   <---------ALFIN1               -------->P <----------DOF2  <---------ATHB12 ---ANAC46   <------------OsbHLH66         <-----------GT1            --------->GLK1(1) -HVH21     <---------REM1(2)    <---------ARR11(3)    <---------------AGL15 ---ANAC58 <-----------------PIF3(1)     <---------MYB52(2)           <---------GLK1(1)   gctttaagcgtgtctccacgtgttcacctctactagttcttctactaaccacattttctttttgtagtttggaaatcaattactaaaaaaacaatttgac  12006600                                             <---------HSFB2a(2)                                             --------->HSFB2a(2)                                          <----------DOF2                                     <--------ATHB1            --------->ARR11(3)                                     <---------ICU4       --------->AHL20(2)                                     --------->YAB1       <---------AHL20(2)                      <--                                    <---------ATHB51     <---------AHL20(2)                      <---                                    <---------ATHB12     <---------AHL20(1)                     -----                                <------ZmHOX2a(2)        --------->AHL20(2)              <---------GLK1(1)   tggttttcaatttcaaatagacaattgtatgtggatcaataattcttttggaaaactaaattatttatcttgtttgttttttaaaatttggaactcattt  12006700  Previous    Next  AGI:  At4g22880.1    Description:  LDOX (TANNIN DEFICIENT SEED 4). Identical to Leucoanthocyanidin dioxygenase (LDOX) [Arabidopsis Thaliana] (GB:Q96323); similar to FLS (FLAVONOL SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G08640.1); similar to anthocyanidin synthase [Matthiola incana] (GB:AAB82287.1); similar to anthocyanidin synthase [Brassica oleracea] (GB:AAO73440.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 12004779    to: 12006220    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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