Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                     <------NtERF2                 <-                                                                    <---------ATERF1(1)        <-----                                                                    ------>NtERF2             <------                       ====================bZIP_DOF                --------->DEAR3(1)         -------                       <---------TGA1a                             ----------->HVH21         --------                       <---------O2                                --------->RAP2.3(3)       <-------GAMYB                       --------->TGA1a                             --------->DREB2C(2)       <------NtERF2                       --------->bZIP60(2)                         --------->At1g77200      <--------                       --------->O2                               --------->ATERF1(1)       <--------                       --------->ANAC58                           <------NtERF2            <---------AtMYB61                       --------->ANAC46                           --------->RRTF1(1)       <---------DREB2C(2)                       --------->ANAC58                           --------->ERF1           <---------DEAR3(1)                     <---------ALFIN1                             --------->DEAR3(2)       <---------ANAC46                    --------->DEAR3(1)                            --------->RAP2.3(1)     <------NtERF2                   --------->ATERF1(1)                            --------->ORA47(2)      --------->ATERF1(1)                   <------NtERF2                                 <---------ATERF1(1)      ------>NtERF2      --------->SPL7--------->RAP2.3(3)                          ------>NtERF2            <---------ABI4(1)  --------------->AtSPL8                                         --------->At4g35610     <---------RRTF1(1)  --------------->AtSPL3                                        --------->RAP2.6(2)      <---------RAP2.3(1) ------ANAC58     <---------ATERF1(1)                           --------->RAP2.3(2)     <---------RRTF1(3) ------ANAC58     ------>NtERF2                                 --------->DEAR3(1)      <---------RAP2.3(3) ----->O2         <---------ZAT18                              --------->ERF1           <---------RAP2.3(2) ------O2 ----------------------->TaNAC69(2)                   --------->MYB46(3)       <---------RAP2.6(2) ----->TGA1a      --------->ZAT18                              --------->RAP2.3(1)      <---------DEAR3(1) ------TGA1a      --------->PCF2                             --------->ARR14(2)         <---------RRTF1(2) ------ANAC46   <---------ZAT18            <------NtERF2------>MYB83--------->MYB52(1) <---------LBD16 -----MYB52(1)  --------->ZAT18          <---------ZAT18------>MYB46(1)               <-----------RAV1(1) ------HVH21------>ZmHOX2a(1)   <----------DOF2      --------->MYB46(3)     ---------->DOF2--------->ALFIN1   cgtgtccgtacttcctagggcgcccacgtctcttctttatcggtccgcttgagaaaccatccatagccgccgacggagtaaaggagttttgcggcggtgg  11965300                                                                                  ------>ZmHOX2a(2)                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)                                                                                <---------AGP1                                                                                <-----------ARR10                                                                               <---------CCA1(2)                                                                           <-------GAMYB                                                                          <------NtERF2                                                                         ------>NtERF2                                                                        <---------ANAC46                                                                       --------->ATERF1(1)                                                                       <------NtERF2                                                                      <---------RAP2.3(1)                                                                      <---------RRTF1(1)                                                                      <---------ERF1        <------ZmHOX2a(1)                                             ------>NtERF2      --------->ALFIN1                                               <---------bZIP60(2)           <-     <------ZmHOX2a(1)                                               <---------O2<---------GLK1(1) --   --------->ALFIN1        <---------ANAC46                          --------->bZIP60(1)          ---  <------ZmHOX2a(1)        --------->ALFIN1                          <---------DEAR3(1)        ------ -------->ALFIN1         <------MYB46(1)                 <-------MYC3<---------ATERF1(2)       ------ -----ZmHOX2a(1)         <------MYB83                    ------->MYC3<---------RRTF1(3)--------->DEAR3(1) ----MYB46(3)           <---------AtMYB61               <---------O2 <---------RAP2.3(3)     -------- ---AtMYB61             <---------DEAR3(1)          ------>NtERF2    --------->ATERF1(2)    <-------- -->ALFIN1         --------->ALFIN1             --------->TOE1(1)    <---------RAP2.3(2)   <--------- ->ATERF1(1)      <---------ZAT2          ----------->HVH21        --------->MYB52(1)  --------->AtMYB61 -DEAR3(2)        --------->ZAT2       --------->GLK1(2)--------->O2--------->RAP2.6(3)<---------ALFIN1 -MYB46(3) ----------->HVH21 --------->ALFIN1  <---------LBD16    ----------->HVH21   --------->MYB46(3)   aggaggaggaggagcgacggagttgggaggtgtgtttgaagtttctgacctcggagccatgtggaagtctgacggcgcgttggatctcaccaccgtaacg  11965400               <-------GAMYB              <---------MYB46(3)              --------->MYB55(2)              --------->MYB52(2)     <---------DEAR3(2)  <-----------HVH21 --------->ANAC46<---------MYB46(3) --------ATERF1(1)     <-----------GT1 ---->NtERF2 --------->ALFIN1 ------>DEAR3(1)<--------P                                    --------->AHL20(2) --->ANAC58  <---------AtMYB61                               <---------YAB1 --->ANAC58 <---------MYB52(1)                             <--------HAHB4                          -- ->SPL7    --------->LBD16          <---------MYB52(1)    --------->ICU4                --------->TOE1(3) -MYB52(1)--------->LBD16          --------->LBD16        <---------YAB1                --------->TOE2(3) --HVH21 <---------LBD16         <---------LBD16       <---------YAB1  <---------AHL20(2)         ---   cctccgtcgctcccggtggttgttttaacaacttctccggtagtctccatacctattacgattattaaacaaaataatcgttttgacaaacctaaaaata  11965500                                                                                                    <                                                                                                    -                                                                                             <-------                                                                                             <-------                             --------->ARR14(2)                                              <-------                             <---------ARR14(2)                                            <---------AHL20(2)                       <-----------GT1                                                  --------->ARR11(3)               <---------ARR11(3)                                                       --------->AHL20(1)               --------->ARR11(3)                                           <-------TEIL<---------ICU4 ------->CCA1(2)  <---------AHL20(2) ----------->GT1             <------ZmHOX2a(1)      <---------AHL20(1) ------>ARR11(1)--------->CCA1(2)   ----------->GT1--------->AHL20(2)>>>>>>>>>TBF1      <---------ARR11(3)   gatttgggacagaagaagatataattttccaaatccaaaggttaaaaatcagattaaaaatcaaggaggaagaagaaatacatgagataatattttcttg  11965600                                --------->ATHB12                                --------->ATHB51                                <---------ICU4   <---------AHL20(2)           -------->ATHB1   <---------YAB1              --------->AHL20(1)                                               ----- <---------CCA1(1)             --------->ICU4                                                   <---- ---------ARR11(3)             <---------AHL20(2)    --------->ICU4                 <---------AHL20(2) -------->ARR11(3)             <---------YAB1  --------->MYB59          <------ZmHOX2a(1)      *TSS < --ANAC46                      --------->AHL20(2)<------ZmHOX2a(1)     ----------->GT1       <------- --ANAC58              <----------DOF2       --------->ICU4     ---------->DOF2     --------->AHL20(2) --ANAC58         ---------->DOF2     <------ZmHOX2a(1)        <------ZmHOX2a(1)   --------->AHL20(2)   tagatattatttcttagaattaaagctttgaaaattattaggatggaattaggaaatgtttgagaggaaagtgaggaaaattagatttatttatgctgtg  11965700                                     ------------>CBF                                     <------NtERF2                                    ------>NtERF2                                   <---------ATERF1(2)                                   --------->ATERF1(2)                                ----------->HVH21                                                  <-                            <---------AHL20(2) <---------YAB1                                 -------                         --------->ARR11(3)   <---------AHL20(1)                              <------                         <---------ARR11(3)   <---------ARR11(3)                            <--------                         --------->AHL20(1)   --------->AHL20(1)                      --------->AHL20(2)                         <---------AHL20(1)   --------->ARR11(3)         --------->DAG2    <---------AHL20(2) ---->ZAT14             <---------AHL20(2)  ------->TEIL                ---------->DOF2  <---------AHL20(2) -----ZAT14         --------->AHL20(2)   <---------ATHB12        ----------->GT1      <---------AHL20(1) ---------ZAT6      <---------AHL20(2)   --------->ICU4       >>>>>>>>>SARD1          <---------ARR11(3) --ANAC46       --------->AHL20(2)--------->RAP2.6(3)         >>>>>>>>>CBP60g         --------->AHL20(1)   tagttttagatgaaataagaaaataaatatttttttgacggcaatgaatatttttgattttgaaatttggaaaataaagcgttttctatatattatttta  11965800                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                           --------->AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                                                                        --------->AHL20(2)                                                                       --------->AHL20(2)  --------->AHL20(2)                     <---------ANAC58      <---------YAB1        ---------->DOF2  <---------AHL20(2)                     <---------ANAC58    <---------AHL20(2)  --------->ANAC58 --------ICU4                      <---------DAG2           --------->AHL20(2)   --------->ANAC46 -->AHL20(2)                       <----------DOF2          --------->AHL20(1)   --------->ANAC58 ---AHL20(2)                   ------>ZmHOX2a(1)            <---------AHL20(2)   <----------ID1 -YAB1      <----------DOF2   <---------MYB59          --------->AHL20(2)  <---------AHL20(2)   atatttatttcaggcttttagttcatttccttcctaactttttccttgtctgtccgtttaaatttaatattgaataaattaatacgaaaaagaaaatgta  11965900                                       <-----------GT1                                  ---------->ID1                                     --------->YAB1                               <----------DOF2                                    <---------YAB1                             <---------AHL20(1)                                   --------->AHL20(2)                          <---------ARR11(3)                               ----------->GT1                              --------->AHL20(2)                               <---------ANAC58              <---------AHL20(2)--------->ARR11(3)         ---------->DOF2       <---------ANAC58      <---------AHL20(2)     --------->YAB1    <---------ANAC58      <-----------RAV1(1)       --------->AHL20(2)    --------->AHL20(2) <-------    <---------ANAC46   <---------AHL20(2)  --------->ANAC46 --------->AHL20(2)--------->CCA1(1)    <---------ANAC58------->TEIL<-------GAMYB------->GAMYB  <---------AHL20(2)--------->RVE1(1)   ttgttttcgtgaaaaggaaatgtatttaatggggcgttataatacaactcacaattttatattttaatttggagaaaataatatctttttgtcatattat  11966000                                                   ---------->DOF2                                                --------->AHL20(2)                                             --------->ATHB51                                             <---------ICU4                                             <--------ATHB1                                             <---------AHL20(2)                                          --------->YAB1                                         <---------AHL20(2)                   ----------->GT1       <                                         --------->AHL20(2)                 ---------->DOF2        --          <---------ANAC58              --------->AHL20(2)            <---------AHL20(2)        -----          <---------ANAC58        ----------->GT1<---------AHL20(2)  --------->AHL20(2)        ------          <---------ANAC46       ----------->GT1<---------AHL20(2) --------->YAB1           ---------       --------->GLK1(1) <---------ARR14(2)  --------->AHL20(2)   <---------AHL20(2)        --------- --YAB1<---------ARR14(2)--------->ARR14(2) --------->ICU4    --------->AHL20(2)          --------->MYB52(1)   agaaatgggaattcgtgtttttgctggaatccgatggggaaaattaataatttaaaagagaagaataaataataaatagaaagtaaaaaaaaaaacggaa  11966100                                     <---------DAG2                                     <----------DOF2                              --------->ICU4                              <---------YAB1                            <---------ICU4                            -------->ATHB1                            --------->YAB1                           <---------AHL20(2) <------MYB46(1)           --------->AHL20(2) ----------->GT1           --------->ICU4 <------MYB83              <---------ATHB51 ---------MYB46(3)      --------->AHL20(2)                               <---------ANAC58 ------->ALFIN1         <---------AHL20(2)                               <---------ANAC46 ---->DAG2    <---------AHL20(2)  <-----------GT1            <----------ID1 ---->DOF2   <---------AHL20(2)  <---------YAB1            ---------->DOF2  <---------At4g35610 >ANAC58     <---------AHL20(1)<---------ICU4       <---------MYB52(1)   <---------ANAC58 >ANAC58     --------->AHL20(2)--------->YAB1  <-----------GT1      <-----------RAV1(1)   agtgggtgatactaatttttttgttttaaattattattacttttagttttttctgttttttaaaagacaaatgtggcctgcagataagacttgttttttt  11966200  Previous    Next  AGI:  At4g22770.1    Description:  DNA-binding family protein. similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63596.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 11963639    to: 11965695    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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