Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                                  ---                                                                                              ------- ->AHL20(2)               --------->YAB1                  --------->YAB1                      <------ -AHL20(2)             --------->TOE2(3)               --------->WOX13(1)           --------->STY1(2) >AHL20(2)           <-------TEIL              --------->ATHB12                     <---------STY1(2)   aagagtacttgatcaattcaaaatacattagtaatttagcagttttgtatcatttgtcaatcgtatgagagaccccttctactactagctagcgaagacc  11913200                                                                                                   <-                                                                                                   --  ----------->GT1              ----------->GT1                                           ------>NtERF2 --------->ANAC46             <---------TOE2(3)                         <---------WRKY18(1)<---------ANAC46 ----->P                      <---------TOE1(3)            --------->WRKY18(1)          <---------ATERF1(2) --->MYB46(1)            <-------TEIL                     <-----------HVH21            <---------ANAC58 --->MYB83            --------->RAP2.6(2)            <-------TEIL    <---------ANAC58  <---------ANAC58 -->ARR11(3)       ------------------>SPL14       <------MYB46(1)    <---------ANAC58 <---------At4g35610 ---ARR11(3)   --------->ZAT6 --------->DAG2      <------MYB83     <---------YAB1<---------YAB1   ---   tacagggcaaaatgcttccactagccgtacataaggttgaatatgtactagtgggttcaaggtcaaaccatgcttgactcagtatttttgctggctggaa  11913300                                                                        <---------DAG2                                                                       <---------ANAC58                                                                       <---------ANAC58            <-           <---------ANAC58                                      --------->ATHB12                  <-           <---------ANAC58                                      --------->ATHB51<---------YAB1  <---           <----------ID1                                        --------->AHL20(2)              <---     <---------YAB1                                              <---------AHL20(2)   --------->YAB1 --------AHL20(2)                                               <---------AHL20(2)  <---------YAB1--- ------->AHL20(2)   --------->ATHB12                          --------->YAB1     <---------AHL20(2)-- ------>AHL20(2)--------->ICU4  --------->MYB52(1)     ----------->HVH21<----------DOF2      --------   ttttattctgaatgcgtcaaaatgaatggtgaggtaatggacacagaccattcacttgtgacaaaaattatttgctttttttttttattaatagtatcaa  11913400   ------->TEIL   <-------TEIL --------------AtSPL8      --------->YAB1 --------------AtSPL3     <---------YAB1 ------ATHB12        --------->AHL20(1)             --------->ANAC58                          ------- ------ATHB51        <---------AHL20(1)         --------->YAB1                           --------->YAB1 ------>YAB1    ------------>CBF     <----------DOF2--------->ANAC58             <---------ZAT18 ------------->AtSPL8<---------ARR11(3) <---------YAB1                  --------->AHL20(2)   -------- ---->CBF<---------------AtSPL3    ------->TEIL<---------YAB1    ----------->GT1 --------->ZAT18   taatgtacgtccaagtacttcaatatatatgataatgtacttttgatttttgataagtcacatagggaagaaaaaaaaataagtgggctaatagtcattc  11913500                                                                             --------->ARR14(2)                                                                            <-------GAMYB                                                                            <-----------HVH21                                                                            --------->At5g28300                                                                           <---------MYB46(3)                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                          <---------RAP2.6(2)                                                                        ------------>AtMYB77                                                                      --------->ATERF1(1)                                                                      <-------GAMYB<---------DEAR3(1)                                                                    <---------ANAC58                                                     <---------ANAC58--------->MYB55(2)                                               <---------ARR14(2)   <---------ANAC46                                               --------->ARR14(2)   <---------DREB2C(2)                                         --------->YAB1             <---------ANAC58                               <-----------HVH21     <---------ANAC58<---------DEAR3(2)                           --------->ETT(1) --------->YAB1          <---------RAP2.6(2)              <---------YAB1 <------NtERF2 <---------ATHB12         <---------DEAR3(1)              <            --------------->AGL15   --------->ARR14(2)            ------------>AtMYB77--------->ALFIN1            <---------------AGL15   <---------GLK1(2)<---------ANAC46<---------MYB46(3)--------->ABI4(2) -->AtLEC2 <-----------------AGL2   <---------ARR14(2)         <---------ICU4<---------ARR14(2)    <- ->WOX13(1)<-----------------AGL3  <---------At4g35610         --------->MYB52(1) <---------At4g35610   aaactaaaaccctactatttttgggtttgtcggagtcagatactaatcatatatggcttacaacataatggcggttgcggttacagcggtgctgtttcta  11913600                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                               <-----------HVH21                           <-----------------------TaNAC69(2)                   --------->ZAT14        --------->ANAC58                 <---------At4g35610      --------->MYB46(3)        =============HOX2a_HOX2a          --------->ANAC58        ------>ZmHOX2a(2)<----------ID1   --------->ANAC46     <-------TEIL    <---------YAB1 <---------ZAT14      <---------ALFIN1     --------->ARR14(2) -------GAMYB ------>ZmHOX2a(1)      --------->AtMYB61       <---------ARR14(2) <--------P   <-------TEIL --------MYB46(3)--------->At4g35610--------->MYB46(3)<-------TEIL      <-------TEIL     ------------   gcggttgtgatcgctcctcagtggacagagacaaaaaaaccaccacgaccgtcggatacatcggatacatcgggtacatcgggtagagacagacgtacaa  11913700                                                                                       <----------ID1                                                                                      --------->RAP2.6(3)                                                                                     --------->MYB52(1)                                                   <---------ANAC58             ------>ZmHOX2a(2)                     --------->HSFC1(2)            <---------ANAC58             <-----------------AGL1                     <---------HSFC1(2)     --------->DOF5.7(2)                <------ZmHOX2a(2)                     --------->HSFB2a(1)   --------->TOE1(3)                   --------->GLK1(1)                --------->LBD16      <---------ANAC55(2)                      <---------ARR14(2)               --------->LBD16       --------->ANAC55(2)                      <---------ARR11(3)          --------->WOX13(1)         --------->ANAC58                      --------->ANAC58        <---------YAB1               --------->ANAC58    <---------------AGL15--------->ARR14(2)     <---------MYB52(1)      <---------ICU4--------->TOE2(3)  ---------->DOF2 <---------AGP1---------    <-------GAMYB    <---------HSFB2a(1)  ----------->GT1--------------->AGL15--------->ARR11(3) --->AtSPL3    <---------LBD16       --------->ANAC46 <---------ARR14(2)   --------->ANAC58 ---------   tgtgcccgttatcaatccctggaatcgtccaaaattgctacgcaacgttaaatgcgtttccatcaaaagaatgctgcaaggatctcaaaacggcaagcaa  11913800                                                                  --------->ANAC58                                                                ------->GAMYB                                                               --------->MYB46(3)                                                        ------>MYB46(1)                                                        ------>MYB83                                                        -------->P--------->ANAC58                                                      --------->AtMYB61                                                   --------->ANAC46 >>>>>>>>>>WRKY63                                             ------>ZmHOX2a(1) <---------ATHB12                                           ------>ZmHOX2a(2)  ------>MYB46(1)       <---------ANAC46                                         <---------ARR11(3)   -------->P  --------->ANAC58                                         <---------ARR14(2)  --------->MYB55(1)     <---------ANAC58                                         --------->AGP1----------->RAV1(1)--------->ANAC46        <---------ANAC58                 --------->ARR11(3) --------->AtMYB61       <---------ANAC58        <---------ANAC58                 <---------ARR14(3) <---------MYB111(2)  --------->ALFIN1     ----------->HVH21                   --------->ARR14(3) <---------MYB55(2)  <-------MYC3       --   <---------At4g35610                   <---------GLK1(2)  <---------MYB46(2)  <-------MYC2       <-   ----------->GT1 ----------->RAV1(1)--------->HSFB2a(2)   <---------MYB111(1) ------->MYC3       --   --------->At4g35610    <---------YAB1 --------->ARR14(2) --------->MYB46(3)  ------->MYC2       -- >ANAC58<---------ANAC46 <-----------HVH21<------ZmHOX2a(2) --------->DEAR3(1) --------->ALFIN1 ----- >ANAC58<---------bZIP60(2)    <---------ZAT18 <----------DOF2------>MYB83--------->ANAC58      <----   gagagaggtgacttgtctctgcaacaatgtcattgcacatccagatcctctttacaccaacaccaaccaagtcaacaaggcatgtggcgttcttgacaaa  11913900                                             <---------TOE2(3)         <---------DEAR3(2)             <----------DOF2        --------------->AtSPL3       --------->ARR11(3)     ----------->HVH21               <---------ARR11(3) ------->ANAC46                      --------->ARR14(2)                                  <---------ANAC58 --------ANAC55(2)                   <---------ARR14(2)                                  <---------ANAC58 ------->ANAC58          <<<<<<<<<MYB2 ------>ZmHOX2a(2)                                 <---------AtLEC2 ------->ANAC58     <----------DOF2  <---------AGP1                            <---------WOX13(1) ---->ARR14(2)<---------DAG2        <---------CCA1(2)                        --------->ATHB12 -----ARR14(2)<----------DOF2  <----------DOF2       --------->YAB1         <---------YAB1   tacgcatgcgacggtactttttctttggttttccttttggatcttttgtggtttatcagaagttatagttttaatcttgtgattgatttttgcatgttgt  11914000                                                                             ----------->GT1                                                                           ---------->DOF2                                                                      <---------------AGL15                                                <xxxxxxxxxxxxxxxxsmallRNA(s)--------->DAG2                                              <---------YAB1          --------------->AGL15                                             <---------ARR11(3)      <-------TEIL   --------->AHL20(2)                                             --------->ARR11(3)      ================================                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->AHL20(2)                                         --------->bZIP60(1)         ----------------->AGL2                   <---------YAB1        <---------bZIP60(1)         ----------------->AGL3              <---------DAG2          <---------YAB1                <------ZmHOX2a(2)              <----------DOF2       <---------ICU4      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            ------>MYB46(1)         --------->YAB1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <x            ------>MYB83            -------->HAHB4<---------ICU4   --------->ARR11(3)    --------->AHL20(2)          <---------MYB46(2)       <---------ATHB51 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------AHL20(2)          <---------MYB59          --------->ICU4<---------YAB1    <---------ARR11(3)--------->AHL20(2)          <---------MYB111(2)    <---------ICU4--------->YAB1      --------->ARR14(2)<---------AHL20(2)          <---------MYB111(1)    --------->YAB1<---------ICU4      <---------ARR14(2)--------->AHL20(1)        ------->TEIL         --------->ZAT6--------->ICU4          --------->AGP1   <---------AHL20(2)   tatgtagttgcacctacttttactattgtttacactaattatgacatgatcatcatcgctgttatacaagatccataaaaagtaaattaaattaaaaatc  11914100  Previous    Next  AGI:  At4g22650.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22640.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612) Range:  from: 11913568    to: 11914038    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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