Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                --------->ATHB51                                                                                <--------HAHB4                                                                                <---------ICU4                     <---------ALFIN1                                          --------->ICU4                 --------->GLK1(1)           --------->HSFB2a(2)       ------>NtERF2                 <---------GLK1(1)     --------->ARR11(3)              <---------RAP2.3(1)               <---------ICU4          <---------ARR11(3)             <---------ANAC58 ----->DOF2    --------->ATHB12 <---------ANAC58            ------>MYB83       <---------YAB1 >ANAC58      <---------YAB1    <---------ANAC46            ------>MYB46(1)  --------->YAB1 >ANAC58      --------->ICU4    <---------ANAC58   --------->AHL20(2) <---------ANAC58  --------->MYB52(1)   aagtttaggcaaaaccatgatttccacctctcttgcttataaatcttccaaaatttaaaacccactagcattgcgcctctcataattaaacaacgtctga  11911200                                                       <---------AHL20(2)                                              ------->TEIL                                            ------->GAMYB                                           <---------MYB52(2)             --------->ICU4                --------->MYB46(3)        --------->ANAC58                 --------->MYB52(1)        --------->ANAC55(1)            <---------MYB52(2)        --------->ANAC58               --------->MYB46(3)        --------->ZAT18        --------->ANAC46            ------->GAMYB   ----------->GT1                      <---------GLK1(1)        --------->bZIP60(2)        <---------MYB52(2)<<<<<<<<<MYB98                 ---------->DOF2 <       ------->TEIL<---------YAB1--------->MYB52(1)----------->GT1            --------->ANAC46 <-----   atcactatgcacgtcattgttatcaatgtggatgctaacgaactaacgaacatatgttaaattcgaatggactaaaatataggcaaaaaagaattcagaa  11911300                                                                        <-----------HVH21                                                                        <-----------TGA1                                                                       --------->bZIP60(1)                                                                       <---------bZIP60(1)                                                                       <---------TGA1a                                                                       --------->ANAC46                                                                       --------->bZIP60(2)                                                                       --------->ANAC58                                                                       <---------ANAC55(2)                                                                       --------->TGA1a                                                                       --------->ANAC55(1)                  --------->AHL20(1)                                   --------->ANAC55(2)                  --------->AHL20(2)                                   --------->ANAC58        ------             --------->AHL20(2)                                        <---------O2            ------             --------->AHL20(1)                                        --------->O2            ------             <---------AHL20(1)                                       <-----------STF1        -------         <---------YAB1            <---------ANAC58                  <---------ALFIN1        <-------       <-----------GT1             <---------ANAC58                 ------>ZmHOX2a(1)     ------>NtERF2    ----------->GT1                <---------ANAC46        --------->DAG2       --------->ANAC46----- ---------YAB1    <---------AHL20(2)                      ---------->DOF2    --------->ARR14(2)------ ----GLK1(2) <---------AHL20(2)  <---------YAB1           =======================bZIP_DOF <---------ATERF1(1)   tttctattgttacaataaaataaaatggccatttgatgcttgttttgcatcggtgttacaaaaagaggtcctcacgtcatatacacaaatgcctcccccg  11911400                          <---------GLK1(2)                               <---------WRKY12   <---------TOE2(3)    --------->AHL20(1)                                <---------WRKY45   <---------YAB1       --------->ARR11(3)                                <---------WRKY38(1) --->ANAC58             <---------ARR11(3)                               --------->WRKY18(1) --->ANAC58          --------->CCA1(2)                                 <------MYB46(1) --->ANAC46         --------->ARR11(3)                       <---------SPL7 <---------YAB1 -->LBD16           <---------ARR11(3)                     --------------->AtSPL3 --LBD16     <---------ANAC46                              <---------------AtSPL8       ---------->DOF2 ---->LBD16  <---------ANAC58                              --------------->AtSPL8    --------->ANAC58 --->LBD16   <---------ANAC58                          ---------->DOF2 <------MYB83  --------->ANAC58   aaattaagtttgttttcttgtagatatatattctcagaacaaatcaaatgccatatagaaagtcgtacacatttggtcaacattgtgaagcaaagtcaat  11911500                                     <-------TEIL                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC55(1)                               <---------ALFIN1                --------->ATHB12 --------->ANAC58               <---------YAB1 ------>MYB46(1)           <---------AHL20(2) ------>MYB83                  --------->YAB1                    <------         --------->ICU4       -------->P               --------->AHL20(2)                    --------         <---------YAB1     --------->AtMYB61        ----------->TBP------->TEIL             <-------    ----------->GT1 ----------->GT1--------->At5g28300 <---------AHL20(2)      <-----------HVH21   gcgactaggttattattttgattagttataccaacacggtacataccaagactctatataaatgataatgtattttggagaagtcacatacaaaattaaa  11911600                                                                     <---------ANAC58              <-                                                                     <---------ANAC58              <-                                          <-----------GT1            <---------ANAC46             <--                                    <---------ARR11(3)          <---------ICU4                    ---                                    <---------AHL20(1)          --------->YAB1                    ---                                    --------->AHL20(1)         <------ZmHOX2a(2)                 ----                                    --------->ARR11(3)     <------NtERF2                         ----        <---------ALFIN1            --------->ICU4        ------>NtERF2                        <-----       --------->MYB46(3)  --------->CCA1(2)             --------->ATERF1(2)                   ------       <---------MYB55(2) --------->AHL20(1)             <---------ATERF1(2)                  -------    --------->ZAT18       <---------AHL20(1)            <---------ANAC58                  <---------GLK1(1) ---AHL20(2)             --------->AHL20(2)            <---------At4g35610             <---------YAB1 ->AHL20(2)            --------->AHL20(2)<-----------GT1<---------ANAC58             <-----------GT1< --AHL20(2)*TSS<---------MYB46(3)--------->AHL20(2)   <-----------RAV1(1)       ---------->DOF2------   taagagcgaaccactggtcgttcaaaaatatataagaaaatattaaacctctgtttttgctggcgatcatggcttacacaaacaaagttacgatatcagc  11911700                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------NtERF2                                                                                              <------                                                                                              <------                                                                                            <--------                                                                                            <--------     <---------ETT(1)                                                                       <-------- <-------GAMYB                      ------>ZmHOX2a(2)                                      <--------- --------DEAR3(1)                  <------ZmHOX2a(2)                                       <------NtERF2 -----NtERF2                    <---------YAB1                                             <---------LBD16 -------LBD16                <---------ARR14(2)                                          <---------DEAR3(1) --->NtERF2 --------->YAB1   <---------MYB52(1)                                        <-------GAMYB ------>LBD16                --------->ARR14(2)                                     <---------ANAC58 -------->AtMYB77           <-------GAMYB                                           <---------ANAC58 ----->DEAR3(1)            <---------MYB46(3)              --------->AtMYB61       --------->ZAT18 ----At4g35610            <---------ANAC46                --------->MYB46(3)       <---------ZAT18 --->ZAT2  --------->ICU4 <---------DEAR3(1)             ------>NtERF2          --------->ALFIN1<---- -->ANAC46 <---------ATHB12<---------DEAR3(2)     <---------WRKY12            ------>ZmHOX2a(1)------ ---------MYB46(3)      ------------>AtMYB77      <---------WRKY38(1)         ======================= --->At4g35610         <-----------RAV1(1)       --------->WRKY18(1)          =======================   cgcggttgcgacaatgatgctgtttctggcggttacgatcgtggatgcacagtcaatgccaccaatgccaaagtttaatcctgtgtgcgcgttggcggat  11911800     --------->YAB1    <---------ATHB12 -->ZmHOX2a(2) -----GLK1(1) ---->GLK1(1) ----ARR14(2) ----AGP1 ----ARR11(3) ----ARR14(3) --->ARR14(2) --->ARR11(3) ------ARR10                                 --------->At4g35610 ---ARR14(1)                                 ----------->RAV1(2) ---CCA1(2)                                  <---------At4g35610  ------>ZmHOX2a(2) -ANAC58                                --------->ANAC58        --------->ARR11(3) -ANAC46                                --------->bZIP60(1)     <---------ARR11(3) -ANAC58                                --------->ANAC58       --------->YAB1 ------------WRI1                       <---------bZIP60(1)   --------->ICU4 --ZmHOX2a(2)                           --------->ANAC46      <---------ATHB12       --------->CCA1(2) --->ARR14(3)           <----------DOF2---------->ID1  --------->At4g35610        --------->ANAC46 ==HOX2a_HOX2a          --------->TOE2(3)------>NtERF2 <---------At4g35610        --------->ANAC58 ===HOX2a_HOX2a <----------DOF2      ----------->HVH21--------->ALFIN1            --------->ANAC58   ctcccaaacatcgtccaactttgctactttaacttggatttgacgccatctgaagagtgctgcaatgatctcaaatcgtcgagcacgatacaagtgaatt  11911900                                                                               <---------REM1(1)                                                                               <-----------RAV1(1)                                                       ----------->HVH21       --------->ALFIN1                                                      --------->SPL7         <---------ANAC46                                                  --------->ANAC58          <---------AtMYB61                                                  --------->ANAC58          --------->ALFIN1                                                 --------->ZAT18        ===================RAV   <---                                               --------->ZAT2           ----------->RAV1(2)      <---                                               <---------ZAT2          ------>NtERF2            <----                                              --------->ANAC58      ------->GAMYB          --------->ARR14(2)                 <---------ZAT18              --------->ANAC58  <---------WRKY12           <---------ARR14(2)             --------->ATHB12             --------->ANAC58      --------->ETT(2)           <---------GLK1(2)            <---------YAB1            <---------ARR11(3)        <---------WRKY38(1)   <---------RAP2.6(3)            <---------AHL20(2)        --------->ARR11(3)        <---------WRKY45      ------>NtERF2    ----------->HVH21    ------>ZmHOX2a(1)--------->ANAC58     --------->WRKY18(1)   <---------ETT(1)   gtctctgtgacaatttcattgcacatccttccaatggcaatatctcgcaagctcgctacgacctggtcaacagcgcctgtggtgttgccgacaaattcgc  11912000          <----------DOF2                                                                     -------       --------->ARR11(3)                                                                  <---------       <---------ARR11(3)   <---------ANAC58                                               <---------   <---------TOE2(3)        <---------ANAC58                                             --------->CCA1(2) ---------->DOF2            <---------ANAC46                                            <---------ARR11(3) ------TOE1(2)         <---------AtLEC2                                        <---------AHL20(2)  <- ------TOE2(2) <-----------GT1      <---------MYB52(1)                  <----------ID1  --------->ARR11(3) -----AtLEC2  <-----------GT1   ---------->ID1               <---------YAB1    --------->AHL20(2) <--   atgtaaaggtatcttttaaacattttcatggcttgtcccttagtattttgttcaaactacattatgttttcaatagaacaaaaaattagagatatagtac  11912100  Previous    Next  AGI:  At4g22640.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22666.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22666.2); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140) Range:  from: 11911611    to: 11912118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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