Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------HSFC1(2)                     --------->HSFB2a(1)                     <---------HSFB2a(1)                                                    =========                     --------->HSFC1(2)                                          --------->ANAC46                 --------->ANAC58                                                --------->ANAC58                 --------->ANAC58                                                --------->ANAC58     <---------GLK1(2)                              ---------->DOF2           --------->ZAT18 ->MYB83         --------->bZIP60(2)          <------ZmHOX2a(2)--------->YAB1 <---------ZAT14 ->MYB46(1)      --------->ANAC46             ====================HOX2a_HOX2a --------->ZAT14 ---MYB59   --------->ANAC58              <---------TOE1(2)<------ZmHOX2a(1)  <---------ZAT18 <------ ->ANAC58   --------->ANAC46          ------>ZmHOX2a(1) <---------LBD16   --------------->AtSPL8 ->ANAC58   --------->ANAC58          ===============HOX2a_HOX2a       <---------YAB1       ------>ZmHOX2a(2)   actctcagaaactcgagccacgaaacttctctgtgttttcctcatacgatccattaaaccaggaaccataagtctcattgtacactcaatctgatcgatt  11900600                              ------>NtERF2                             --------->ANAC46                             --------->ANAC58                             --------->bZIP60(2)                             --------->ANAC58                           <---------ALFIN1                      --------->HSFB2a(1)                     <------ZmHOX2a(2)                    --------->GLK1(2)                    --------->ARR11(3)                    <---------ARR14(2)                    <-----------ARR10                    --------->ARR14(2)                                        ------>ZmHOX2a(1)                    <---------ARR11(3)       <---------DOF5.7(2)        --------->HSFB2a(1)        <-       ------>MYB46(1)<---------HSFB2a(1)    --------->MYB52(1)         --------->HSFC1(2)     ------       ------>MYB83<------ZmHOX2a(1)       --------->DOF5.7(2)          <---------HSFB2a(1)    ------     ------->GAMYB--------->HSFC1(2)      <----------DOF2      <------ZmHOX2a(2)               <-----    --------->MYB46(3)------>ZmHOX2a(2)   --------->TOE2(3)    ======================HOX2a_HOX2a ----  <-----------GT1 <---------HSFC1(2)<-----------TGA1          --------->ARR11(3)              <------ =========================HOX2a_HOX2a   --------->ICU4        <---------ARR11(3)        <---------DEAR3(1) ---GLK1(2) --------->At4g35610    --------->YAB1       <-----------GT1 <---------HSFC1(2)<------NtERF2   cttttaaccaactcatcagaaggatctttccacgccatcgtcatctttaacggttgattcacaagatcaagagaagtttcctcgtcttcgtcgtcggaat  11900700                                                                                            <--------                                                                      --------->ARR11(1)    --------- <---------GLK1(2)                                           --------->LBD16                --------- --------YAB1                                         --------->GLK1(1)                     --------- --->ARR14(2)                                   <------ZmHOX2a(1) ---------->DOF2           --------- --->GLK1(2)         --------->MYB52(1) <------ZmHOX2a(1)   --------->DEAR3(1)              <-------- ----ARR14(2)    ---------->DOF2  <------MYB83 --------->ICU4------>NtERF2  <---------GLK1(2)    ---- ----->YAB1 <---------ETT(2)<------ZmHOX2a(1) <---------TOE2(3) <------ZmHOX2a(1)           --------- ---GLK1(2) <---------MYB46(3)    <------MYB46(1)     <---------GLK1(1)--------->MYB52(1) <----------   cttgattctcacggtcgatgaaagaacggaggagattggtgaggaggtaaggatggatatcgccgaggaaaagaaacggagtctcgagagagttacgcca  11900800                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                           --------->CCA1(2)                                          --------->ARR14(3)                                          --------->ARR11(3)                                          <-----------ARR10                                          <---------ARR14(3)                                          --------->AGP1                                          <---------AGP1                                          <---------ARR11(3) -bZIP60(1)                 <---------YAB1<---------ARR14(2) >ANAC55(2)               <---------ANAC46--------->ARR14(2) >bZIP60(1)         <---------AtMYB61--------->At4g35610                        <---------TOE1(1) >ANAC46         ==================================HOX2a_HOX2a                  <---------TOE2(1) >ANAC58         ======================HOX2a_HOX2a        <---------ZAT6 <---------ANAC46 -ANAC55(2)      <------ZmHOX2a(1)   <------NtERF2   <---------ANAC58  --------->MYB52(1) ------->HVH21   =================================HOX2a_HOX2a  --------->ZAT6 <------ZmHOX2a(1) >ANAC58       --------->ANAC58   --------->At4g35610<---------ANAC58 ----------->TGA1 -GT1          --------->ANAC58 ------>ZmHOX2a(2)    <---------ANAC46 ----------->HVH21          <---   tgaagggaagagaaggtaaggaatggtgttgtgatcggcagcaagatctagggtttcgtagtataagactaggtgacggaggacgaggtctacgttggag  11900900                         ---------->DOF2                   --------->ALFIN1                   <---------DEAR3(1)                  <------NtERF2                  --------->ATERF1(1)                  <---------LBD16----------->HVH21                 <---------RAP2.3(1)                <---------RAP2.3(2)                <---------DEAR3(1)               --------->ATERF1(1)               --------->At4g35610                                                                ---         --------->At4g35610    <---------WOX13(1)                                         <---------ICU4         <---------At4g35610  --------->ATHB12                          <-----------GT1    --------->ATHB12    --------->ANAC58    <------ZmHOX2a(1)                       <---------TOE1(3)          -------->ATHB1    --------->ANAC58 <------NtERF2       <------ZmHOX2a(1)   <---------MYB52(1)           <---------ATHB12  <------ZmHOX2a(1)<---------ANAC46<---------LBD16<------NtERF2 <---------TOE2(3)         <---------YAB1 ---ZmHOX2a(1) <---------At4g35610--------->MYB52(1)        <-------GAMYB                 --------->ICU4   gagaggacggaagcggaagcggcggaggaaagtgattgacggaggagagggaggcagttttcggttagggtttttgaccagtcttcgtagaaatcattga  11901000                                                                                  ---------->DOF2                  --------->LBD16                                               --------->HSFB2a(2)                 <---------ANAC46                                           <---------GLK1(1)                 <---------ANAC58                                           --------->GLK1(1)   -----                 <---------ANAC58                                         <------ZmHOX2a(1)<---------ANAC46             <---------ANAC46                                         ------>ZmHOX2a(2)    <---------ANAC58             <---------ANAC58                                       --------->ARR14(2)     <---------ANAC58             <---------ANAC58              <---------ANAC46        <------ZmHOX2a(1)   <----------DOF2            --------->MYB52(2)             <---------ANAC58    <---------O2<---------ARR14(2)<-------        ----------->GT1   ---------->DOF2  <---------ANAC58  --------->CCA1(2)  <---------HSFB2a(2) ------>DEAR3(2)<---------LBD16 ---------->DOF2      <---------ZAT14<---------ARR14(2) <---------DAG2   atcgacgagatggtttcttgcgggagaagaaagagaaaggcattttcttggagagtgaagaagacacgaggatcgaggatttctgaaagcttttcgtgag  11901100                                                           --------->GLK1(1)                                                           --------->HSFB2a(1)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          --------->GLK1(2)                                                          <---------ARR11(1)                                                          ------->TEIL                           <------------CBF              <---------GLK1(2)                          --------->ATHB12               <---------CCA1(2)                          <---------ICU4            ------>MYB83------>ZmHOX2a(1)                          --------->YAB1            --------->MYB52(1)           <<<<<<<<<<MYB80                         <---------YAB1             ------>MYB46(1)             ----------->GT1                         <------ZmHOX2a(2)        <---------MYB59               <------MYB83 ------>GT1         <-----------GT1   <----------DOF2    <---------ARR14(1)     <------MYB46(1) --MYB52(1)  <-----------GT1   <---------YAB1     --------->AtMYB61  ------------>CBF              <-   gttttaatctgtttttcacattttacgatcattgttatcggtttaagtgaaaccaaaccgaatctcctaaattcaatttagttggtttaatgaccataaa  11901200                                                                                            <--------           --------->ANAC58                                                         ------->TEIL           --------->ANAC58                                                         --------->ARR14(2)       <-----------GT1                                                              <---------ARR11(3)     <---------ATHB12                                                               --------->ARR11(3)   --------->WOX13(1)                                                               <---------ARR14(2) ------------>CBF             <----------DOF2      <---------AHL20(2)<------------CBF ------>ZmHOX2a(2) ----------GT1                <---------DAG2      <-----------TBP   --------->ATHB12<---------AGP1   tataccaattaacaagcccttgtctaaatgggctttttcttgaaccgtggtattttataggctctctctaccattggatgaagatggatcttaattctta  11901300                                                                                     <---------AHL20(2)               <------------CBF          --------->YAB1                             --------->AHL20(2)          --------->AHL20(2)           --------->MYB52(1)                ----------->GT1   <------------CBF       <---------------AGL15                         --------->DAG2       -------- -ICU4    <---------AHL20(2)         <---------MYB52(2) ---------->ID1 ---------->DOF2    -----------   cagataattgaaataaatattggaattaacaaaaatagaactaacataatttgtttttgtttttttgttgaaataaagtgaaaacataaaattggtaaag  11901400                                  --------->DAG2                              --------->ANAC58                              --------->ANAC58                              --------->ANAC46                           --------->TOE1(2)                           --------->TOE2(2)                     --------->YAB1                                                  <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             --------->ICU4 -->DOF2             <-----------GT1 --------->DOF5.7(2)                      <------ZmHOX2a(1)  <--- >GT1            <---------AHL20(2)----------->GT1              ----------->GT1  ----------->GT1 <---   agtttttttttttttttttttaatcacaacatacgaaaggttaacttgaagaacacaactacaaacatgtgaaaacattaggaatgtttatttggagaaa  11901500  Previous    Next  AGI:  At4g22600.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN67303.1) Range:  from: 11900222    to: 11901043    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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