Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <<<<<<<<CAMTA3          <---------ANAC55(2)          --------->ANAC55(2)       ----------->HVH21      <-----------HVH21     --------->MYB46(3)     --------->bZIP60(2)   -------->P     --------->ANAC46     --------->WOX13(1)   <---------ALFIN1     <---------ATHB12 -----------GT1   <-----------GT1                           <-----------GT1 ------------------->TaNAC69(2)        <---------ICU4   ------>ZmHOX2a(1)     <-----------GT1   tttgaccacatcacgcgttttaacaaatcaaccaattctaaacatgtccaattagttcctattttcaattcaagtctgtttaacttcttatacaatgagt  11896100                         ---------->DOF2           --------->AHL20(2)                       --------->ANAC58        --------->AHL20(2)                           ---------                       --------->ANAC58       --------->AHL20(2)                 --------->YAB1                      <-------TEIL            <---------ATHB12                 --------->ANAC58                    --------->TOE1(2)   --------->ARR14(2)                     --------->ANAC58     -                ---------->DOF2        <------ZmHOX2a(1)             <---------YAB1        <---------   tttgcctaaaccaatgctcaaaggtacgaaagaacagagcaggattcaataaataaaacaaaaacatcattttgatgaggcaaacaaaataaaacgacag  11896200    --------->HSFB2a(2)    <---------HSFB2a(2)    --------->HSFC1(1)   ------>ZmHOX2a(2)  --------->CCA1(2)  <------ZmHOX2a(2) --------->AGP1 >>>>>>>>>GATA-4 <---------ARR11(3) --------->ARR11(3)                                                                               --- >>>>>>>>>GATA-1                                                                          <---------MYB59 >>>>>>>>>GATA-3         --------->TOE2(3)                                               ----------->RAV1(2) >>>>>>>>>GATA-2<---------ATHB12        <---------GLK1(2)      --------->ZAT6           ------->TEIL -->RAV1(1)--------->TOE2(3)---------->DOF2                   <---------ZAT14       --------------->AtSPL8 -------->GLK1(1)--------->YAB1     <------ZmHOX2a(2)         --------->ZAT14       --------------->AtSPL3 -ID1   <---------GLK1(1)--------->TOE1(3)         ----------->GT1     --------->ATHB12 --------->MYB52(1)   agagatctagaaatctcaatgataaaacctaaaaacagatcagaaacttaaaaatgtgaaacagaacactaaatgatttgagagaaaacgtacctgattc  11896300                                                                            --------->HSFB2a(2)                                                                            <---------HSFB2a(2)                                                                           ------>ZmHOX2a(2)                                                                           ==========================                                                                    <---------LBD16                                                               <---------GLK1(2)                                                           --------->HSFB2a(2)                                                           <---------HSFB2a(2) ---------->DOF2                                                           <---------LBD16--------->GLK1(1)                                                     <---------ARR14(2)   <------ZmHOX2a(2)                                                     <---------GLK1(2)    ===========================                   --------->MYB52(1)                --------->ARR14(2)  <---------ARR14(2)       ----------->GT1                               <-----------ARR10   --------->ARR14(2)     <---------ANAC46                                <---------ARR11(3)  <---------ARR11(3)   --------->At4g35610  --------->AGP1      --------->AHL20(2) --------->ARR14(2) ----------->GT1 ------->DOF2   --------->ANAC46 --------->GLK1(2)   --------->ARR11(3)  --------->ARR11(3)        <-   aaaagagctgtgtaaaacacaaaacagagctagagaatcacgagaaaaaaatgcagattttctcggaatctcagggatctcgaaaggagaaatcactaag  11896400                                                                      --------->LBD16                                                                     <---------ANAC55(2)                                                                     --------->ANAC46             <---------AHL20(2)                                      --------->ANAC55(2)    <------ZmHOX2a(2)                                               <---------LBD16   --------->ARR11(3)                                             --------->ARR14(2)   <---------ARR14(2)                                    --------->ZAT18   <---------ARR11(3)                                    <---------ZAT18<---------GLK1(2) ----------->ARR10                                ---------->DOF2 --------->GLK1(2) =====HOX2a_HOX2a                           <---------ICU4        <---------ARR14(2)    <------ZmHOX2a(1) =====HOX2a_HOX2a     <----------DOF2 --------->TOE1(3)<---------At4g35610           <------ZmHOX2a(1) -----ZmHOX2a(1)   <-----------GT1    --------->TOE2(3)--------->At4g35610     ---------->DOF2-------   aggaagatcagggattttttttttctttattcgaagaaaaccctaaaaattgcaaagagctcactaaaaatccggaatttggaaagaggaggagaagaga  11896500                                                                                 <------------CBF                                                                               <---------AHL20(2)                                                                          <---------YAB1                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                        --------->AHL20(2)                       <-----------TBP                                  --------->YAB1                   <---------ANAC46  --------->GLK1(2)             ------------>CBF      <---------MYB52(1)                   <---------ANAC58 <---------ARR14(2)         --------->DAG2  --------->AHL20(1)                   <---------ANAC58 <---------GLK1(2)    <---------------AGL15 --------->AHL20(2)       <------ZmHOX2a(1) <---------AHL20(2)       <-------TEIL---------->DOF2 <---------AHL20(2) ---->GT1       <----------DOF2     --------->ARR14(2)   --------------->AGL15--------->AHL20(2)   gaaaatgaaggagatgggctttcgtatttatagagtccgattctctcaaaaatacattacaaaataaagcacaattaaaattaaattgtccgtttctcaa  11896600                 ----------->GT1                 <---------MYB46(3)                --------->ALFIN1                                                        <----------DOF2              --------->O2  <---------ARR11(3)                                        ------>MYB83              <---------O2  --------->ARR11(3)                                   <-----------GT1              <---------TGA1a--------->GLK1(1)                               --------->AHL20(2)              <---------bZIP60(2)                          <-----------GT1   <---------AHL20(2)   ---              <---------ANAC58                        --------->LBD16       <---------AHL20(2) ------              --------->TGA1a<---------GLK1(1)       ----------->GT1       <---------WOX13(1)  <-----              <---------ANAC58            <---------YAB1   --------->RVE1(1)--------->AHL20(2)<------              <---------ANAC46            <---------AHL20(2)       <---------TOE1(2)  ------>MYB46(1)             <-----------------------TaNAC69(2)      --------->LBD16<---------YAB1  <---------MYB59   ggagacacagagagagacgtggttaacaaggatatcaggctgtttttattgaatcccgaaaatacctctcatgtttgatttatttaccaactttgccatc  11896700                              --------->ATHB51                         <---------MYB46(3)                             <---------YAB1                           <---------MYB52(1) ------>At4g35610         --------------->AGL15                      <---------MYB52(1) --->At4g35610            <---------YAB1                     --------->YAB1      <---------ANAC58   < ----At4g35610            <---------------AGL15           --------->YAB1         <---------ANAC58  <- -----HVH21        <-----------GT1                   --------->ICU4  <-------GAMYB       <-----------   agacgaccaagaccacattataaactttcttattattgtatttagcgagttcgtcattagtcataatattcggttgttttcttacttgttttttttttgt  11896800                                                                                          ------>MYB83                                                                                  <---------ANAC58                                                                                  <---------AtLEC2                                                                                  <---------ANAC58                                                                              <---------ANAC58                                                                              <---------ANAC58                                         <----------DOF2                 <---------ICU4 --------->MYB46(3)                                      --------->ARR11(3)                 --------->AHL20(2)                              <---------ANAC58                          --------->AHL20(2)------>MYB46(1)                              <---------ANAC58                        --------->YAB1    <---------MYB59                              --------->ANAC55(2)               --------->HSFB2a(2)  <---------WRKY18(1)      <---------HSFB2a(1)    <---------TOE2(3)         --------->TOE2(3)<---------AHL20(2)--------->MYB52(1) ---------LBD16             <-----------GT1   <---------ZAT6    <---------HSFB2a(2)<---------WOX13(1) --------ANAC46        <---------YAB1 <---------ARR11(1) <---------AHL20(2) --------->ARR11(3) -------------ANAC81 <---------ZAT6  <---------CCA1(2) --------->ANAC55(2)  <---------AHL20(2)   tttgtggaatctttgaacaagtagtattatttacgtttcaaatctttggtgttatatacttaatttgtagaaaaataatttcttgcttgaccaaacgaat  11896900                                       --------->YAB1                                     <---------RAP2.6(3)                                     <-----------HVH21                                    --------->RAP2.6(2)                            ---------->DOF2                                    --------->RAP2.3(3)                     --------->AHL20(2)                                    --------->RAP2.3(2)                  <---------ICU4                                   --------->RAP2.3(1)                   <--------HAHB4                                  <---------At4g35610                    --------->YAB1                                  --------->At4g35610                   --------->ICU4                               --------->At4g35610                      --------->AHL20(2)                               <---------At4g35610                    --------->YAB1                           ----------->HVH21                       <---------HSFC1(1)               <     <---------DOF5.7(2)   --------->ALFIN1                        --------->HSFB2a(2)              <   --------->DOF5.7(2)   <---------ANAC58                          <---------HSFB2a(2)         ------   <---------MYB52(1)    <---------ANAC58  --------->RAP2.6(3)     --------->HSFC1(1)----------->GT1-  <-------GAMYB          <---------ANAC46 --------->MYB52(1) <----------DOF2<---------AHL20(2) <----- <---------MYB46(3)   --------->ANAC46<------NtERF2          <---------DAG2 --------->YAB1     ------ ----------->GT1<---------ANAC46  <---------ATERF1(1)     <---------ALFIN1 <---------YAB1     -------   gggtcgttaactaatgtgtcttaaacggcgtgaagcagccgtcataacggctctacattcccactttttctagaataattatatagaaagaaaaaaaaaa  11897000  Previous    Next  AGI:  At4g22590.1    Description:  trehalose-6-phosphate phosphatase, putative. similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G12430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70330.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IIB; (InterPro:IPR006379); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337) Range:  from: 11893510    to: 11896491    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g22592.1    Description:  CPuORF27 (Conserved peptide upstream open reading frame 27) Range:  from: 11893510    to: 11896491    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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