Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->DEAR3(1)                     --------->ATERF1(1)                     --------->MYB46(3)                  <--------P                                     -------->P                 <------NtERF2                                  <-----------GT1                 --------->ATERF1(1)                           ------>ZmHOX2a(2)                 <-------GAMYB                                --------->CCA1(2)                <---------MYB46(3)                            <------ZmHOX2a(2)            --------->ANAC46                                 <---------ARR11(3)                     x            <---------DEAR3(1)                               --------->ARR14(2)               <------           --------->SPL7                                    <---------ARR14(2)               <------         <---------ZAT14   <---------MYB52(1)                --------->AGP1                <---------DEAR3(1)      <------------------SPL14                            --------->YAB1        <-----------TGA1----- -----ZmHOX2a(2)<---------DEAR3(2)--------->ARR14(2)=================HOX2a_HOX2a<-----------HVH21 --- ----->GLK1(1) <---------DEAR3(1) <---------ARR14(2)==================HOX2a_HOX2a<---------MYB52(1)<- -->LBD16--------->ZAT14<------NtERF2               ------>ZmHOX2a(1)     <---------At4g35610 <------ -LBD16  <---------SPL7------>NtERF2       --------->GLK1(1) --------->ARR11(3)--------->ANAC55(2)<--   gatcgaaccagtgtacggcggtagccaccgttatcaaatccacagagttctctcctccaataagatctaccatttcatcttccgtcatcgacgagggcgt  11859800        <---------MYB52(1)      --------->ANAC58      <---------ANAC55(2)      --------->ANAC55(2)      --------->ANAC58     --------->SPL7     <-------TEIL   <---------SPL7  <---------MYB46(3) <---------AtMYB61<---------ARR14(2) <---------------AtSPL8 <---------------AtSPL3                                                              --------->LBD16 --------------->AtSPL3 <----------DOF2                                             --------->ANAC55(2) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                  <---------ANAC55(2) ---ANAC46 <---------ANAC58                                                         <---------ANAC46 ---ANAC58 <---------ANAC58                                      --------->MYB46(3)<---------LBD16 ---->ALFIN1<----------DOF2                               <-----------HVH21    <---------ZAT6  <----- ------>ALFIN1<---------LBD16                           <-------TEIL      <---------ANAC58   -------- --------ANAC46   --------->ARR14(2)                    --------->SPL7    <---------ANAC46   -------- ---ANAC58--------->MYB52(2)  --------->LBD16      <---------DOF5.7(2)    <---------ANAC58   -------- -------AtMYB61<---------ANAC46    <-------TEIL    --------->MYB52(1)  <----------DOF2   <------ZmHOX2a(2)   gtggtggtacgttactttcggatgcggttttccgagattcaacatcgtctcgctaacgtccgtcgcaacgactctttcgtagtgttccgcgatctaagca  11859900                                 <---------GLK1(1)                                 --------->GLK1(1)                            --------->ANAC55(2)                            <---------ANAC55(2) ----------->GT1                        <----------DOF2    --------->LBD16                    <-------TEIL<---------ARR11(3)    ---------->DOF2                   --------->CCA1(2)      <---------HSFB2a(2)                   --------->GLK1(2)      --------->HSFB2a(2)   ----------->GT1 --------->ARR14(1)    <---------LBD16                                         <--- -----ID1         <---------GLK1(2)      ------>ZmHOX2a(2)                ----------->GT1        <--- ->ANAC58         <---------ARR14(2)    <------ZmHOX2a(2)                <------ZmHOX2a(1)       <--- ->ANAC46         --------->ARR14(2)   <---------ARR14(2)               ----------->GT1          ---- ->ANAC58         --------->ARR11(1)   --------->ARR14(2)    ---------->DOF2     <-------TEIL    ----   acaagtcgtaaaaaatcagagattcgcgttacgagatttcagatcgggaaatgtaagaaagaagaaagagagggaggagaaaatacatactccgatggca  11860000                     <------NtERF2                    <-----------HVH21                    ------>NtERF2                   <---------ANAC58                   <---------ANAC58                   --------->DEAR3(1)                  --------->ATERF1(1)                 --------->LBD16               <---------LBD16         <-----------------AGL1         <---------LBD16       <---------ARR14(2)                          <---------At4g35610                 <------MYB83       --------->ARR14(2)                          --------->At4g35610                 <------MYB46(1)      <---------MYB52(1)  --------->ANAC58 <---------MYB46(3)                 <------NtERF2   ----------------->AGL1 --------->ANAC46 --------->MYB55(2)                --------->LBD16  <------ <---------WRKY18(1)<---------SPL7     <---------DEAR3(1)              --------->MYB52(1)     <------ ------At4g35610 ------>NtERF2         <---------DREB2C(2)--------->ZAT2     ------>NtERF2<---------ANAC58 ------ZAT2  <---------ARR14(2)        <---------ANAC46--------->DEAR3(1)   <---------ANAC46  <------ ---NtERF2   --------->ARR14(2)     ----------->HVH21 <------NtERF2    ------>MYB83   --------->MYB59 ----->At4g35610<---------RAP2.6(2) ----------->TGA1<---------DEAR3(1) ------>MYB46(1)--------->MYB111(1) ----->ZAT2--------->LBD16--------->ANAC58--------->ALFIN1<---------ZAT2   <---------LBD16<---------ANAC58   gcttggccgtttccggttccggcgtcccaagcgagattgtgacggtgggagagagcggcgagcttggagtaccaatcggcgggataagtaggtcgtgcgt  11860100                     --------->YAB1      <---------GLK1(1)      --------->CCA1(2)     <---------ARR11(3)          <<<<<<<GRF7     --------->ARR11(3)        ----------->HVH21                                                  <-- ---ANAC58     <---------WRKY18(1)                <----------DOF2                                 === ---ANAC46 --------->ZAT2    ----------->RAV1(2) <---------ANAC58                               ----- ---ANAC58 --------->At4g35610 ------>ZmHOX2a(1) <---------ANAC58                     <---------ARR14(2)   ctaagtagatatcagcttgactatcgtaaactcctgacatttttgtgatttgcttcttcgattcaaatttctgatcaaattggtttcgaattctggtgag  11860200                          --------->TGA2(1)                          --------->bZIP60(1)                          <---------TGA2(1)                          <---------ETT(2)                          --------->ETT(2)                          <---------bZIP60(1)                       ----------->TGA1                   <---------TGA1a                   <---------ANAC58                   <---------O2                                         <---------ANAC46           <------ZmHOX2a(1)                                           <---------LBD16    -------->HAHB4 <---------ANAC46                                  --------->WRKY12    --------->YAB1 <---------bZIP60(2)                               ----------->HVH21  <------------   <---------YAB1  *TSS----------->HVH21--------->ARR14(2)     --------->WRKY12        <---------At4g35610 --------->YAB1    <---------ANAC58     <---------ARR14(2)     --------->WRKY45        --------->At4g35610 --------DOF2   ----------->TGA1<------------CBF <-----------GT1   <----------DOF2   <---------WRKY12 ============================bZIP_DOF  --------->GLK1(1)       --------->WRKY38(1) <-----------HVH21 ---->At4g35610 ----------->HVH21      <---------GLK1(1)   ------>ZmHOX2a(1) <----------DOF2 <-------   ctttaataatagaggagagtgacgagtgacgacagattgcgaaatccgattttgctatttcctcgttgactttgacgggttttttggtcagctaaaattg  11860300                                                                                       ----------->GT1                                                                                   <-------TEIL                                                         <---------MYB59       --------------->AtSPL3                                                         <---------MYB52(2)  --------->ARR14(2) -----AGL3                        <---------YAB1         <------------MYB.PH3(2)   ------->TEIL -----CBF         --------->AHL20(2)                   <-----------GT1       <---------ARR14(2)   gttttggattttgtttcggtttaaatctattttgttttgatttagtatatgtcagtataactaactcactctatacgagtatacgtacatggagaaatag  11860400                 --------->WOX13(1)              <-------GAMYB             <---------MYB46(3)             ----------->GT1            <--------P                                                            <---------AHL20(2)           <-------GAMYB           <---------YAB1                                 <---------YAB1          <---------MYB46(3)       <---------AHL20(2)                          <---------YAB1       -          <------MYB46(1)          --------->AHL20(2)                        <---------AHL20(2)   <--          <------MYB83             --------->AHL20(1)                 --------->ETT(1)          <----         <---------AtMYB61        --------->AHL20(2)                  <---------LBD16    ----------->HVH21       <---------AtLEC2    ----------->GT1               ---------->DOF2<------NtERF2  <---------At4g35610 <---------AHL20(2)  ---------->DOF2           <------ZmHOX2a(1) <----------DOF2 <---------AHL20(2) <   tatttttttggatggttgttaatcaaagatgctaaattttattgcaagaggagtaatgtgaaagagtctttgtcgggatttatttttattgctgacatat  11860500           <---------AHL20(2)           --------->AHL20(2)        <--------HAHB4        -------->HAHB4        --------->YAB1        <--------ATHB1        --------->ATHB51        <---------ICU4       --------->ICU4                                          --------->TOE2(3)       <---------YAB1                                     -------->P       <---------ATHB51                                   ------>MYB46(1)       --------->AHL20(2)                                 ------>MYB83     --------->YAB1                                     <---------MYB59    <---------AHL20(2)                                  <---------MYB111(1)   --------->AHL20(2)                                   --------->TOE1(2)   <---------AHL20(2)                                 ------>MYB46(1) -------->AHL20(2)               --------->ARR11(3)   -------->P -------AHL20(2)              --------->ANAC58        ------>MYB83 -----AHL20(2)                --------->ANAC58      <---------MYB59            ----------->HVH21 ---------AHL20(2)            --------->ANAC46      --------->AtMYB61--------->TOE2(3)   atttttttaataattaaatacaaatggattacaaggaacttgtccaatgtaagaccaacctactacattaatctcaactatttgacgagggagatagaga  11860600                    <---------ZAT14                   <----------DOF2                      <----------DOF2           --------->CCA1(2)                      <------ZmHOX2a(1)      ---------->DOF2         <------ZmHOX2a(1)----------->HVH21---------->DOF2              --------->AtMYB61        ----------->GT1  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <------ZmHOX2a(1)   ------>ZmHOX2a(1)   attgaagagaaggatataagactttacagtgacactctaagactcaaaaggaggacgtcttttaggagatagaaccaaagcctccttctgatatttgttc  11860700  Previous    Next  AGI:  At4g22530.1    Description:  embryo-abundant protein-related. similar to embryo-abundant protein-related [Arabidopsis thaliana] (TAIR:AT5G10830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67377.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 11859015    to: 11860219    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g22540.1    Description:  oxysterol-binding family protein. similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G08180.1); similar to oxysterol binding [Arabidopsis thaliana] (TAIR:AT4G12460.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G08180.2); similar to putative oxysterol-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAK15443.1); similar to putative oxysterol binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM97165.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61805.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro d Range:  from: 11860455    to: 11866375    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version