Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->AHL20(2)                         <---------AHL20(2)           <---------AHL20(2)          <---------AHL20(1)          --------->AHL20(1)               <---------AHL20(2)          <---------AHL20(2)              --------->AHL20(2)          --------->AHL20(2)  ----------->GT1 -------YAB1         <---------YAB1--------->ARR11(3)                                              <- ------TOE2(3)    ------>ZmHOX2a(1)<---------ARR11(3)    ----------->GT1                        <---- ----AHL20(2)    --------->TOE2(3) --------->GLK1(2)     --------->YAB1                       <------   atgttagaaaaataaaattccttatttttaaatagaaaatcttataaaatggaatagaatagtaaatgtttagtttttgtagtttatagttaactagtgt  11830600         <---------GLK1(2)  <---------ICU4                     <----------DOF2     <---------AHL20(2)       <---------TOE2(3)    --------->YAB1                  --------->ARR11(3)  <---------AHL20(1)       <---------TOE1(3)   --------->ICU4  --------------->AGL15                --------->AHL20(1) --------ZAT14           --------->YAB1   ----------------->AGL1    <---------ANAC58 -----ANAC46        <---------GLK1(2)     ----------------->AGL3    <---------ANAC58 ---ANAC46      ---------->DOF2    --------->bZIP60(2)      <---------ARR11(3) --------->ICU4<-------   gtgtagttcaaggttctcaaaagcttctcataatgacacatcataccatttttgtgaaccattatctttttcttgtgagtaatattttttgatattttct  11830700                                             <------------CBF                                        --------->AHL20(2)                                     <----------DOF2                                  --------->GLK1(2)<-------TEIL                                  <---------ARR11(1)                                  --------->ARR11(3)                                  <---------ARR11(3)                                  <---------ARR14(2)                                  --------->ARR14(2)        <---------YAB1                   <-------                          --------->GLK1(2)--------->ARR11(3)                       <---------AHL20(2)                          <-----------ARR10--------->AHL20(1)                       --------->AHL20(2)                         <---------GLK1(2) <---------AHL20(1)                    ----------->GT1  ---------->ID1      --------->HSFB2a(2)  <---------AHL20(2)  --------->GLK1(2)----------->GT1 ----GT1         <---------AHL20(2)  --------->TOE2(3)   --------->TOE1(2)  --------->AHL20(2)    <--   cttcgtctcattcttatattatatcgagaatctcagtatctttaaaatattgatacatagctacgattccgaactaaaaaaaatgtttaatttcgaattg  11830800                                                          <---------ARR14(2)                              <---------YAB1           <---------ANAC58                             <-----------TBP           <---------ANAC46                         <---------DEAR3(2)            <---------ANAC58                         <------MYB83               <----------DOF2                     <------------CBF                         <------MYB46(1)    --------->AHL20(1)                     <-------GAMYB                        <---------DEAR3(1)  <---------AHL20(2)                    ----------->GT1                       <--------P----------->TBP <---------AHL20(2)  <---------LBD16<---------MYB52(1)                       <---------MYB55(1)   <---------AHL20(1)  <---------MYB52(1)<------MYB83------- -----CBF             <---------MYB52(1)   --------->YAB1 --------->ARR14(2)      <------MYB46(1) ----------CBF       <---------SPL7        --------->AHL20(2)  <-------GAMYB     --------->MYB59   gattggaaccgaaatcacatagccggtcggtttttataaattcgattatattttctttcgtattcggttatctcgggtttagttcggttatattggtcca  11830900                                                                                <------MYB83                                                                                <------MYB46(1)                                                                               <---------MYB46(3)                                                                               --------->MYB111(1)                                                                               <---------AtMYB61                                                                               --------->MYB55(2)                                                                               <---------DEAR3(1)                                                                               --------->MYB111(2)                                           ---------->DOF2                     --------->MYB46(2)                                       --------->At4g35610                    <--------P                                       <---------At4g35610                    <---------MYB55(1)             ----------->GT1          ------->TEIL                          <---------MYB46(3)           <---------ANAC46         ---------->DOF2                         --------->ATHB12     <---           <------------CBF     ========================HOX2a_HOX2a        <---------ATHB12      ====       <-------GAMYB            ------>ZmHOX2a(2)                      ------------>CBF  <---------AtLEC2      --------->MYB46(2)       =========================HOX2a_HOX2a    <---------YAB1<---------------AGL15      --------->MYB52(2)       <------ZmHOX2a(2)                   --------->ANAC55(2)  <---------REM1(2)   ------------>MYB.PH3(2)    --------->ARR14(2)                   <---------ANAC58<---------ZAT18 ----->CBF--------->ATHB12    <---------ARR14(2) <------ZmHOX2a(1) <---------ANAC58--------->ZAT18   atttgagttagttgattgtaatttcttcaacggatcgatgaagctcaaagaggaagtagagagaaacttacttatcaatggttggtgctctacatggcga  11831000                                                                                                    -                                                                                                  ---                                                                                        ----------->RAV1(1)                                                                                        ------>NtERF2                                                                                       ----------->HVH21                                                                                       <---------ETT(1)                                                       <---------MYB52(1)  --------->ANAC58   -------       <---------ANAC46                                <<<<<<<<<MYB98 <---------At4g35610   ---------   <------------CBF------>ZmHOX2a(1)            ----------------------->TaNAC69(2)     --------->ANAC46 ---ZmHOX2a(2)<---------GLK1(2)   <---------MYB46(3)  <-----------HVH21    --------->ANAC58 --------- =========================HOX2a_HOX2a  <---------YAB1--------->ANAC46 --------->At4g35610  ------>NtERF2   tcagagattgggtttagattcctctcttcttcgtgatggttcttattggaattatccgttacttcgtctctaagctcaagcgatattctccgacaccaaa  11831100                               ------>NtERF2                              <---------ALFIN1                              --------->DEAR3(1)                             --------->ATERF1(1) -------->DAG2               <------NtERF2 ------->DOF2               <---------ATERF1(1)        ---------->ID1 --->DOF2           --------->ATHB12               <---------ANAC58       <---------LBD16 >ANAC58           <---------YAB1                  <---------ANAC58 <---------AHL20(2) >ANAC58           ------>ZmHOX2a(1)           <---------GLK1(2)   --------->AHL20(2)     <----------DOF2   gaaaggtgagtcgtttctctccttattggtcgccacctatatgtgtatagattgtttgtcgaattcatataaaattttcggagtctaaaatacttttgct  11831200                                                                 <---------ANAC58                                                               <------ZmHOX2a(2)                                                              <---------ARR11(3)                                                              <---------GLK1(2)                                                              --------->ARR11(3)                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                        ==============HOX2a_HOX2a                                                        ===============HOX2a_HOX2a                                                        <------ZmHOX2a(1)                                                       <----------ID1 <---------ANAC58                                                  =====================HOX2a_HOX2a                                                  ------>ZmHOX2a(1)   <---------ANAC58                                                  ====================HOX2a_HOX2a                                             <---------HSFB2a(1) <---------ANAC58             --------->ANAC58               <---------KAN4(2) <---------ARR14(3)             --------->ANAC46             ============================HOX2a_HOX2a             --------->ANAC58             <------ZmHOX2a(1)   --------->ARR14(3)          <---------WOX13(1)    ------>ZmHOX2a(2)        --------->ATHB12--------->HSFB2a(1)------>ZmHOX2a(2)--------->ANAC58  --------->ARR11(3)        <---------YAB1=============================HOX2a_HOX2a      --------->ATHB12  <---------ARR11(3)  --------->AHL20(2)<---------TOE2(3)   ----------->ARR10    --------->ANAC58   atttgatcttggtccaagcctgatttttatatcattgcatttgaggaatgtcctgagaggacaagatccttgtcttgtgcaagaagccattgattgaata  11831300                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                  <---------DAG2                                                                                  <----------DOF2       ---------->DOF2                                                 ----------->RAV1(2)<---------ANAC58      <---------AHL20(2)                    <---------ARR11(3)----------->GT1  ------>ZmHOX2a(1)    <   gaagctatttaaagcgttttgtacaattgcatttgcaaattgtcaagaactcaagtatgaagactggataaaaacctgctcctactttatttgtgtggac  11831400   <-----------GT1                                 <---------TOE2(3)  --------->GLK1(1)                               ---------->DOF2 ->ZAT18                                    <---------AHL20(2) --ZAT18                                    <---------AHL20(1)                                    --- --ZAT14                              <-----------GT1                                             --- ->ZAT14                        ------>ZmHOX2a(1)<---------AHL20(2)    <---------ANAC58           --- ---------CCA1(2)         <----------DOF2   --------->AHL20(2)         <---------ANAC58    <---------AtMYB61   tcatatatccatatgaaatgttagtcttcttttcctcatattacattttatttaaagtatttctattttgcaggcttgtgagacgctcaagttgtggtcc  11831500  Previous    Next  AGI:  At4g22440.1    Description:  unknown protein Range:  from: 11831036    to: 11832280    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version