Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->At4g35610                   <---------ALFIN1                 ----------->RAV1(1)               <---------ZAT18               --------->ZAT14               --------->ABI4(1)                                                                  ---              --------->DEAR3(1)                                                              -------       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <------      --------->ANAC58         ---------->DOF2                                            ------>MYB83      --------->ANAC58  --------->ZAT18 ---------->DOF2                                   ------>MYB46(1) ----HVH21   --------->ANAC46--------->ANAC58                                            --------->MYB52(1) ->TOE2(3) <---------ALFIN1  --------->ANAC58                                            ----------->RAV1(1) >ANAC58 xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                            --------->AtMYB61 >ANAC58 <-----------HVH21   --------->ANAC46                                     ----------->HVH21 -->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <----------DOF2            <---------------------   aaccaagaacgcatcaccgcaccatctgcacaagaaagtatagaaagacataagcttttttcagacacatatggattaagagacatgacaccaacagata  11790700                                                                            <-----------HVH21                                                                      --------->ARR14(2)                                                                      <-----------ARR10          ---------->DOF2                                   <---------GLK1(2)      --------->GLK1(1)   <---------ANAC46             <-----------GT1<---------ARR14(2) -------->RAV1(1)  --------->YAB1                      --------->MYB52(1)   ------>ZmHOX2a(1) -->ARR14(2)  <---------ARR11(3)              <----------DOF2   <----------ID1                  <---- ---ARR14(2)  --------->ARR11(3)           <---------ARR11(3)   ----------->HVH21              ------ --TaNAC69(2)--------->YAB1<---------ZAT18 --------->ARR11(3) ----------->GT1   --------->ANAC46-----   ccacagagaaatcaaagataatcaaattgtgtacatttgactaaatgtctttcaaattaacagaatgtgacaaatctccttcacatcacagaggcaaata  11790800                      <---------ANAC46                      <---------bZIP60(2)                                          ------->TEIL         --------->YAB1 --------->ALFIN1                                        <---------ATHB12 --------->ZAT6  <---------ANAC46 ------->TEIL                                --------->WOX13(1) -----ICU4       <---------ANAC58------>MYB83          --------->TOE1(3)    <---------ATHB12 --->AHL20(2)    <---------ANAC58------>MYB46(1)       --------->TOE2(3)------->GAMYB ---->YAB1  <---------ICU4     <---------MYB59   <---------ATHB12    --------->MYB52(1)    ----------   ataacgctaaatcaaaatggcatgaagtggagaccgaaccctgtagcccaaatcaaaccataaaccatgaacaacgaaatcaatgaatgcaaatcgaaaa  11790900                            <---------LBD16                         ----------->HVH21                       --------->ANAC46                       --------->ANAC58                       --------->ANAC58                                           --------->ARR14(2)                       <---------At4g35610                            <---------MYB59                     <---------ANAC46                                <---------ANAC55(2)                     <-----------RAV1(2)                             --------->ANAC55(2)                =================RAV      <---------At4g35610     <---------MYB52(1)                <---------ZAT6--------->LBD16                   <---------ZAT6 <---------TOE1(2)            <---------SPL7--------->MYB52(1)                    <---------ANAC58  <---------ARR14(2) ---------->DOF2<-----------RAV1(1)       --------->At4g35610   <---------ANAC58 <------ZmHOX2a(1) ->GT1    <---------------AtSPL3   --------->ATHB12         <---------MYB52(2)--------->LBD16   tagaaaaggaagaacgtactgttgcaggtaaccggattgaatggagcagaagggaagagccaactagcgttacttaactccgaggatttgaattgagttt  11791000                                    --------->REM1(2)                                    ---------->DOF2                                   ----------->HVH21                                  --------->LBD16                              ------>MYB83                              ------>MYB46(1)                              -------->P                       <---------HSFB2a(1)                       --------->HSFB2a(1)                                      --------->REM1(2)                      <---------ARR14(2)                                      --------->LBD16                      --------->ARR14(2)                                     <---------ANAC46                     --------->ARR14(2)                                      --------->ANAC55(2)                     <---------GLK1(2)                                       <---------ANAC55(2)                  <---------HSFB2a(2) --------->ANAC58                       <---------ANAC58                  --------->HSFB2a(2) --------->ANAC58                       <---------ANAC55(1)               --------->ARR14(2) <-----------HVH21                      <---------GLK1(1)---------->DOF2               <---------ARR14(2)<---------ANAC55(2)                <---------ANAC58   >>>>>>>>>TBF1-      --------->ATHB12--------->GLK1(2)                   --------->ANAC46   <---------ANAC58 -------     <-------TEIL<-------TEIL<---------ALFIN1     ---------->DOF2   <---------ANAC58>>>>>>>>>TBF1 ---   ggatgggttcattagcaggtccagaatctcccaacccgtgaagccacaagatgaaagttcgagccatcgtgcttgagttccgtgaagaagaagaaagaaa  11791100                  --------->ZAT18                                   ----------->HVH21                --------->ZAT18                                   ----------->RAV1(2)            --------->DAG2                              ----------->GT1 --------->DOF2 --------->ZAT14                        ----------->GT1 --->DOF2  ---------->DOF2                            <---------TOE2(2)                           --- ------>ARR11(3)<---------ZAT18                       <---------TOE1(2)            ------------>CBF   gataaagaagatgaaaagtgctcactatcgataggcttcgtctgtgtattccttcgcatgttaaaatcgcctgaaactttgccatttcaatggcgatttt  11791200                                                   <------ZmHOX2a(1) <---------MYB59                         ---------->DOF2    <---------ZAT14    <---------------AtSPL8                  ------>NtERF2             --------->ZAT18    --------->DAG2             <----------DOF2             --------->HSFB2a(2)            --------->ZAT14    --------------->AtSPL8 ---------->ID1    ---------->DOF2  <----------DOF2        <---------ZAT18   ---------->DOF2       <---------MYB46(3) ------->ID1 <---------HSFB2a(2)       ---------->DOF2   ----------->GT1          <-------GAMYB   ---   gtctctcaaagtcttcgcgacgactttcaaagtagaaactacaaagtccactaggacaagagtgaaaagtaccaaaataccctcggttgtcgttttatgt  11791300                                 *TSS                       ------>NtERF2                 <---------At4g35610         --------->TOE1(1) <---------DAG2         --------->TOE2(1) <----------DOF2   --------->ANAC58   --------->ANAC58 <---------At4g35610      --------->ANAC58             --------->GLK1(2)         <   --------->ANAC58 --------->At4g35610      --------->ANAC46            <---------GLK1(2)          - ------>ANAC46   --------->At4g35610  <---------ZAT6                   ----------->ARR10  ---------->DOF2   ccgaaacgacatcgtacatagctgcagcccttttttgttagtgttttaagccagacagggagagagaagggagaagaatctcgcgagagacagaaaggga  11791400         <---------MYB46(3)         <------MYB83         ----------->GT1         <------MYB46(1)        --------->MYB46(2)        --------->MYB55(2)        <---------DEAR3(1)        --------->MYB111(2)        --------->MYB111(1)        <---------AtMYB61        <---------MYB46(3)       <---------MYB55(1)       <--------P      <---------ANAC58                                                                           <---      <---------ANAC58                                                                         ------     --------->ATHB12                                                  --------->ANAC46      --------     <---------MYB46(3)                      <---------DAG2      <---------HSFC1(2)          <-------     --------->MYB55(2)                      <----------DOF2     --------->HSFC1(2) <-----------GT1 - --------->ATHB12                     <---------ANAC46  ------>NtERF2  --------->ANAC58   --------->MYB52(1) ---------YAB1                        ----------->GT1  <---------RAP2.6(2)         --------->MYB46(3) -------->ICU4                       --------->MYB59<---------DEAR3(1) --------->ANAC58   ------>NtERF2   cgattattggttggtgaaatttagagcatttttgggaattgggtaaacttttcgatggcgacttcgaagcttcaagctatttggaatcaccctgccggac  11791500                                                                                                 <---                                                                                               <-----                                                                           ----------->GT1     ------                                    ------>ZmHOX2a(1)                      --------->AtLEC2    ------                               <----------DOF2                          <-------TEIL          ------- ------MYB59                  <---------ANAC58                       <------MYB83             <------ ->TEIL                       <---------ANAC58                       <---------MYB46(3)       <------ ->LBD16                --------->ATHB12                  <---------AHL20(2)              ----------- --SPL7                <---------YAB1                <-------TEIL    <------MYB46(1) <---------TOE2(3) --------->DOF2        --------->ICU4            <---------YAB1  <-----------RAV1(1)<-----------GT1   ctaaaaccagtgagtcaattccacgatgattagctttcctcatcgatttcgatgattcattttttttttgttggttcatgtaaaattgacgattcaatta  11791600  Previous    Next  AGI:  At4g22300.1    Description:  SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase. similar to phospholipase/carboxylesterase family protein [Arabidopsis thaliana] (TAIR:AT3G15650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23250.1); contains InterPro domain Phospholipase/carboxylesterase (InterPro:IPR003140) Range:  from: 11787325    to: 11791067    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g22310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14695.1); similar to unknown [Populus trichocarpa] (GB:ABK93494.1); contains InterPro domain Protein of unknown function UPF0041 (InterPro:IPR005336) Range:  from: 11791333    to: 11792888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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